RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ARHGAP27Q6ZUM4 889 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 SH3BP5LQ7L8J4 393 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 PPM1NQ8N819 430 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 OR8H1Q8NGG4 311 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 RSAD2Q8WXG1 361 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 TEKT1Q969V4 418 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 ALPK1Q96QP1 1244 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 HINFPQ9BQA5 517 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 A1CFQ9NQ94 594 aaKnown RBP5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 PGAP2Q9UHJ9 254 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 MAPK8IP1Q9UQF2 711 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 GPR52Q9Y2T5 361 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 ATAD2Q6PL18 1390 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 CGNL1Q0VF96 1302 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 ARHGAP35Q9NRY4 1499 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 GABRDO14764 452 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 ATP1A3P13637 1013 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 RPL17P18621 184 aaKnown RBP5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 TMF1P82094 1093 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 TCEA2Q15560 299 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 MTERF2Q49AM1 385 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 DACT2Q5SW24 774 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 ENOSF1Q7L5Y1 443 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 SLC44A2Q8IWA5 706 aaPredicted RBP5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 AFAP1L2Q8N4X5 818 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 NKAIN3Q8N8D7 197 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 SPATA5Q8NB90 893 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 FBXO18Q8NFZ0 1043 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 TDRD7Q8NHU6 1098 aaKnown RBP5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 ZNF483Q8TF39 744 aaPredicted RBP5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 ANKRD49Q8WVL7 239 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 CCT6BQ92526 530 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 GPATCH1Q9BRR8 931 aaKnown RBP5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 CRACR2AQ9BSW2 395 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 SRRTQ9BXP5 876 aaKnown RBP5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 SAP130Q9H0E3 1048 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 OSGEPQ9NPF4 335 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 C6orf203Q9P0P8 240 aaPredicted RBP5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 ZMAT5Q9UDW3 170 aaKnown RBP5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 ADAMTS1Q9UHI8 967 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 TRHDEQ9UKU6 1024 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 LUC7L2Q9Y383 392 aaKnown RBP5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 TNKSO95271 1327 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 MAST1Q9Y2H9 1570 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 DCCP43146 1447 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 CHD2O14647 1828 aaKnown RBP5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 SMAD7O15105 426 aaKnown RBP5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 MUTP22033 750 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 HSPA4P34932 840 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 HOXD12P35452 270 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 GABREP78334 506 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 SH3RF1Q7Z6J0 888 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 IQCA1Q86XH1 822 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 GALNT13Q8IUC8 556 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 PLEKHM2Q8IWE5 1019 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 NKAPQ8N5F7 415 aaKnown RBP5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 LSMEM1Q8N8F7 131 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 PI4K2BQ8TCG2 481 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 RADILQ96JH8 1075 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 C1orf74Q96LT6 269 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 GSDMAQ96QA5 445 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 NUDT16L1Q9BRJ7 211 aaKnown RBP5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 INCENPQ9NQS7 918 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 ZNF112Q9UJU3 913 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 PPT2Q9UMR5 302 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 ZMYM3Q14202 1370 aa5.63□□□□□ -1.51
SPTBN1-206ENST00000602898 SOS1Q07889 1333 aaPredicted RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 EYA2O00167 538 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 KLHL41O60662 606 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 SNUPNO95149 360 aaKnown RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 DNTTP04053 509 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 FSHRP23945 695 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 CHMLP26374 656 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 CA8P35219 290 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 CD86P42081 329 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 DGKGP49619 791 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 PDE6CP51160 858 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 ATP2B2Q01814 1243 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 ORC1Q13415 861 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 ABCB5Q2M3G0 1257 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 C2orf27AQ580R0 203 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 C20orf194Q5TEA3 1177 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 NXNQ6DKJ4 435 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 BNC2Q6ZN30 1099 aaPredicted RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 RNF135Q8IUD6 432 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 TSEN2Q8NCE0 465 aaKnown RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 GIMAP7Q8NHV1 300 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 SLC39A3Q9BRY0 314 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 APOL5Q9BWW9 433 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 TSPY26PQ9H489 355 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 NCOA5Q9HCD5 579 aaKnown RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 HCSTQ9UBK5 93 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 SAP30BPQ9UHR5 308 aaKnown RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 MSRB2Q9Y3D2 182 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 PRDM15P57071 1507 aaPredicted RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 ABHD14A-ACY1A0A1B0GW23 586 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 TISP43B9A030 160 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 B9A039 149 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms