RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 NAP1L2Q9ULW6 460 aaPredicted RBP19.33■□□□□ 0.68
SSBP4-213ENST00000602088 PHF24Q9UPV7 400 aa19.33■□□□□ 0.68
SSBP4-213ENST00000602088 NR2E3Q9Y5X4 410 aa19.33■□□□□ 0.68
SSBP4-213ENST00000602088 CST5P28325 142 aaPredicted RBP19.32■□□□□ 0.68
SSBP4-213ENST00000602088 ADD1P35611 737 aaKnown RBP19.32■□□□□ 0.68
SSBP4-213ENST00000602088 EVCP57679 992 aa19.32■□□□□ 0.68
SSBP4-213ENST00000602088 NKX3-2P78367 333 aa19.32■□□□□ 0.68
SSBP4-213ENST00000602088 IRX5P78411 483 aaPredicted RBP19.32■□□□□ 0.68
SSBP4-213ENST00000602088 TMEM63BQ5T3F8 832 aa19.32■□□□□ 0.68
SSBP4-213ENST00000602088 ARHGEF16Q5VV41 709 aa19.32■□□□□ 0.68
SSBP4-213ENST00000602088 CCSAPQ6IQ19 270 aaPredicted RBP19.32■□□□□ 0.68
SSBP4-213ENST00000602088 NOL8Q76FK4 1167 aaKnown RBP19.32■□□□□ 0.68
SSBP4-213ENST00000602088 SPC25Q9HBM1 224 aa19.32■□□□□ 0.68
SSBP4-213ENST00000602088 PXMP2Q9NR77 195 aa19.32■□□□□ 0.68
SSBP4-213ENST00000602088 CNTNAP5Q8WYK1 1306 aa19.31■□□□□ 0.68
SSBP4-213ENST00000602088 MYADML2A6NDP7 307 aa19.31■□□□□ 0.68
SSBP4-213ENST00000602088 H0YGN5 161 aa19.31■□□□□ 0.68
SSBP4-213ENST00000602088 CTAGE5O15320 804 aa19.31■□□□□ 0.68
SSBP4-213ENST00000602088 SEC24BO95487 1268 aa19.31■□□□□ 0.68
SSBP4-213ENST00000602088 C6orf222P0C671 652 aaPredicted RBP19.31■□□□□ 0.68
SSBP4-213ENST00000602088 EIF2AK2P19525 551 aaKnown RBP19.31■□□□□ 0.68
SSBP4-213ENST00000602088 METAP2P50579 478 aaKnown RBP eCLIP19.31■□□□□ 0.687e-7■■■□□ 17.5
SSBP4-213ENST00000602088 ANAPC15P60006 121 aa19.31■□□□□ 0.68
SSBP4-213ENST00000602088 TOB2Q14106 344 aaPredicted RBP19.31■□□□□ 0.68
SSBP4-213ENST00000602088 STXBP2Q15833 593 aa19.31■□□□□ 0.68
SSBP4-213ENST00000602088 KCNA10Q16322 511 aa19.31■□□□□ 0.68
SSBP4-213ENST00000602088 DUSP28Q4G0W2 176 aa19.31■□□□□ 0.68
SSBP4-213ENST00000602088 FERMT2Q96AC1 680 aa19.31■□□□□ 0.68
SSBP4-213ENST00000602088 WDR11Q9BZH6 1224 aa19.31■□□□□ 0.68
SSBP4-213ENST00000602088 UPF3BQ9BZI7 483 aaKnown RBP19.31■□□□□ 0.68
SSBP4-213ENST00000602088 Q9Y3F1 56 aa19.31■□□□□ 0.68
SSBP4-213ENST00000602088 CCDC196A0A1B0GTZ2 297 aa19.3■□□□□ 0.68
SSBP4-213ENST00000602088 NR3C2P08235 984 aa19.3■□□□□ 0.68
SSBP4-213ENST00000602088 ACLYP53396 1101 aa19.3■□□□□ 0.68
SSBP4-213ENST00000602088 ATN1P54259 1190 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-213ENST00000602088 GNASQ5JWF2 1037 aa19.3■□□□□ 0.68
SSBP4-213ENST00000602088 SLC39A5Q6ZMH5 540 aa19.3■□□□□ 0.68
SSBP4-213ENST00000602088 PCSK9Q8NBP7 692 aaKnown RBP19.3■□□□□ 0.68
SSBP4-213ENST00000602088 SCFD2Q8WU76 684 aa19.3■□□□□ 0.68
SSBP4-213ENST00000602088 PDCD2LQ9BRP1 358 aa19.3■□□□□ 0.68
SSBP4-213ENST00000602088 V9GY48 417 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-213ENST00000602088 NID2Q14112 1375 aa19.3■□□□□ 0.68
SSBP4-213ENST00000602088 A0A1W2PQ45 241 aaPredicted RBP19.29■□□□□ 0.68
SSBP4-213ENST00000602088 A0A1W2PQY0 241 aa19.29■□□□□ 0.68
SSBP4-213ENST00000602088 MOXD2PA6NHM9 499 aa19.29■□□□□ 0.68
SSBP4-213ENST00000602088 MEIS2O14770 477 aa19.29■□□□□ 0.68
SSBP4-213ENST00000602088 DYNC1LI2O43237 492 aaPredicted RBP19.29■□□□□ 0.68
SSBP4-213ENST00000602088 PTGS1P23219 599 aa19.29■□□□□ 0.68
SSBP4-213ENST00000602088 PDIA3P30101 505 aaKnown RBP19.29■□□□□ 0.68
SSBP4-213ENST00000602088 TLK2Q86UE8 772 aa19.29■□□□□ 0.68
SSBP4-213ENST00000602088 FCHSD1Q86WN1 690 aa19.29■□□□□ 0.68
SSBP4-213ENST00000602088 C7orf61Q8IZ16 206 aa19.29■□□□□ 0.68
SSBP4-213ENST00000602088 AP5M1Q9H0R1 490 aa19.29■□□□□ 0.68
SSBP4-213ENST00000602088 PIK3CDO00329 1044 aa19.28■□□□□ 0.68
SSBP4-213ENST00000602088 EIF3JO75822 258 aaKnown RBP19.28■□□□□ 0.68
SSBP4-213ENST00000602088 ASGR1P07306 291 aa19.28■□□□□ 0.68
SSBP4-213ENST00000602088 BEX3Q00994 111 aa19.28■□□□□ 0.68
SSBP4-213ENST00000602088 SNX17Q15036 470 aa19.28■□□□□ 0.68
SSBP4-213ENST00000602088 PGM5Q15124 567 aa19.28■□□□□ 0.68
SSBP4-213ENST00000602088 USP17L6PQ6QN14 398 aa19.28■□□□□ 0.68
SSBP4-213ENST00000602088 HEATR3Q7Z4Q2 680 aa19.28■□□□□ 0.68
SSBP4-213ENST00000602088 VSIG10LQ86VR7 867 aa19.28■□□□□ 0.68
SSBP4-213ENST00000602088 IL17RAQ96F46 866 aa19.28■□□□□ 0.68
SSBP4-213ENST00000602088 PSTPIP2Q9H939 334 aa19.28■□□□□ 0.68
SSBP4-213ENST00000602088 PDRG1Q9NUG6 133 aa19.28■□□□□ 0.68
SSBP4-213ENST00000602088 NKRFO15226 690 aaKnown RBP eCLIP19.27■□□□□ 0.687e-7■■□□□ 12.3
SSBP4-213ENST00000602088 TXNP10599 105 aaKnown RBP19.27■□□□□ 0.68
SSBP4-213ENST00000602088 FSCN1Q16658 493 aaKnown RBP19.27■□□□□ 0.68
SSBP4-213ENST00000602088 C1orf53Q5VUE5 145 aa19.27■□□□□ 0.68
SSBP4-213ENST00000602088 WWC2Q6AWC2 1192 aa19.27■□□□□ 0.68
SSBP4-213ENST00000602088 CCDC62Q6P9F0 684 aa19.27■□□□□ 0.68
SSBP4-213ENST00000602088 SEPT14Q6ZU15 432 aa19.27■□□□□ 0.68
SSBP4-213ENST00000602088 GPKOWQ92917 476 aaPredicted RBP eCLIP19.27■□□□□ 0.68
SSBP4-213ENST00000602088 CUL5Q93034 780 aa19.27■□□□□ 0.68
SSBP4-213ENST00000602088 KIAA1217Q5T5P2 1943 aa19.26■□□□□ 0.67
SSBP4-213ENST00000602088 hCG_1984214I3L0E3 225 aa19.26■□□□□ 0.67
SSBP4-213ENST00000602088 ARIH2O95376 493 aa19.26■□□□□ 0.67
SSBP4-213ENST00000602088 MYCLP12524 364 aaPredicted RBP19.26■□□□□ 0.67
SSBP4-213ENST00000602088 RTP1P59025 263 aa19.26■□□□□ 0.67
SSBP4-213ENST00000602088 TTLL4Q14679 1199 aa19.26■□□□□ 0.67
SSBP4-213ENST00000602088 NTRK3Q16288 839 aa19.26■□□□□ 0.67
SSBP4-213ENST00000602088 C8orf34Q49A92 452 aa19.26■□□□□ 0.67
SSBP4-213ENST00000602088 ZNF713Q8N859 430 aaPredicted RBP19.26■□□□□ 0.67
SSBP4-213ENST00000602088 IL31RAQ8NI17 732 aa19.26■□□□□ 0.67
SSBP4-213ENST00000602088 SMARCC2Q8TAQ2 1214 aa19.26■□□□□ 0.67
SSBP4-213ENST00000602088 ZNF274Q96GC6 653 aaPredicted RBP19.26■□□□□ 0.67
SSBP4-213ENST00000602088 ALDH8A1Q9H2A2 487 aaPredicted RBP19.26■□□□□ 0.67
SSBP4-213ENST00000602088 ELP1O95163 1332 aa19.25■□□□□ 0.67
SSBP4-213ENST00000602088 FRMPD4Q14CM0 1322 aa19.25■□□□□ 0.67
SSBP4-213ENST00000602088 RGS20O76081 388 aa19.25■□□□□ 0.67
SSBP4-213ENST00000602088 TYW1BQ6NUM6 668 aa19.25■□□□□ 0.67
SSBP4-213ENST00000602088 GLT1D1Q96MS3 346 aa19.25■□□□□ 0.67
SSBP4-213ENST00000602088 LARP6Q9BRS8 491 aaKnown RBP19.25■□□□□ 0.67
SSBP4-213ENST00000602088 NCOA5Q9HCD5 579 aaKnown RBP19.25■□□□□ 0.67
SSBP4-213ENST00000602088 STARD7Q9NQZ5 370 aa19.25■□□□□ 0.67
SSBP4-213ENST00000602088 BARHL2Q9NY43 387 aa19.25■□□□□ 0.67
SSBP4-213ENST00000602088 ATP11BQ9Y2G3 1177 aa19.25■□□□□ 0.67
SSBP4-213ENST00000602088 STXBP3O00186 592 aa19.24■□□□□ 0.67
SSBP4-213ENST00000602088 PRPF3O43395 683 aaKnown RBP19.24■□□□□ 0.67
SSBP4-213ENST00000602088 IFNAR1P17181 557 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms