RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 TRIML1Q8N9V2 468 aa17.09■□□□□ 0.33
HIF3A-218ENST00000600383 MLKLQ8NB16 471 aa17.09■□□□□ 0.33
HIF3A-218ENST00000600383 CDK5RAP3Q96JB5 506 aa17.09■□□□□ 0.33
HIF3A-218ENST00000600383 MMTAG2Q9BU76 263 aaKnown RBP17.09■□□□□ 0.33
HIF3A-218ENST00000600383 RAVER2Q9HCJ3 691 aaKnown RBP17.09■□□□□ 0.33
HIF3A-218ENST00000600383 HOMER2Q9NSB8 354 aa17.09■□□□□ 0.33
HIF3A-218ENST00000600383 FAM86B1E9PN63 330 aa17.08■□□□□ 0.33
HIF3A-218ENST00000600383 GTPBP6O43824 516 aaPredicted RBP17.08■□□□□ 0.33
HIF3A-218ENST00000600383 ICAM1P05362 532 aa17.08■□□□□ 0.33
HIF3A-218ENST00000600383 FAM86B2P0C5J1 330 aa17.08■□□□□ 0.33
HIF3A-218ENST00000600383 SREBF1P36956 1147 aa17.08■□□□□ 0.33
HIF3A-218ENST00000600383 ZNF75DP51815 510 aa17.08■□□□□ 0.33
HIF3A-218ENST00000600383 TPM4P67936 248 aa17.08■□□□□ 0.33
HIF3A-218ENST00000600383 PDIA5Q14554 519 aa17.08■□□□□ 0.33
HIF3A-218ENST00000600383 SMYD4Q8IYR2 804 aaPredicted RBP17.08■□□□□ 0.33
HIF3A-218ENST00000600383 LRRC15Q8TF66 581 aa17.08■□□□□ 0.33
HIF3A-218ENST00000600383 ZNF536O15090 1300 aa17.08■□□□□ 0.32
HIF3A-218ENST00000600383 PITPNM2Q9BZ72 1349 aa17.08■□□□□ 0.32
HIF3A-218ENST00000600383 CYP3A7-CYP3A51PA0A087WV96 503 aa17.08■□□□□ 0.32
HIF3A-218ENST00000600383 ALAS1P13196 640 aa17.08■□□□□ 0.32
HIF3A-218ENST00000600383 CYP3A7P24462 503 aa17.08■□□□□ 0.32
HIF3A-218ENST00000600383 NCAPHQ15003 741 aa17.08■□□□□ 0.32
HIF3A-218ENST00000600383 KRT79Q5XKE5 535 aa17.08■□□□□ 0.32
HIF3A-218ENST00000600383 KLHL10Q6JEL2 608 aa17.08■□□□□ 0.32
HIF3A-218ENST00000600383 CYP2W1Q8TAV3 490 aa17.08■□□□□ 0.32
HIF3A-218ENST00000600383 CRYGNQ8WXF5 182 aa17.08■□□□□ 0.32
HIF3A-218ENST00000600383 NUDT12Q9BQG2 462 aa17.08■□□□□ 0.32
HIF3A-218ENST00000600383 RTN4Q9NQC3 1192 aaKnown RBP17.08■□□□□ 0.32
HIF3A-218ENST00000600383 DACH1Q9UI36 760 aa17.08■□□□□ 0.32
HIF3A-218ENST00000600383 ABCB11O95342 1321 aa17.07■□□□□ 0.32
HIF3A-218ENST00000600383 MYL5Q02045 173 aa17.07■□□□□ 0.32
HIF3A-218ENST00000600383 PLA2G4DQ86XP0 818 aa17.07■□□□□ 0.32
HIF3A-218ENST00000600383 SNX29Q8TEQ0 813 aa17.07■□□□□ 0.32
HIF3A-218ENST00000600383 ZFP91Q96JP5 570 aaPredicted RBP17.07■□□□□ 0.32
HIF3A-218ENST00000600383 PPP1R9AQ9ULJ8 1098 aa17.07■□□□□ 0.32
HIF3A-218ENST00000600383 IKBKBO14920 756 aa17.06■□□□□ 0.32
HIF3A-218ENST00000600383 PPP1R12BO60237 982 aaPredicted RBP17.06■□□□□ 0.32
HIF3A-218ENST00000600383 HSP90AA4PQ58FG1 418 aa17.06■□□□□ 0.32
HIF3A-218ENST00000600383 TRMT44Q8IYL2 757 aaKnown RBP17.06■□□□□ 0.32
HIF3A-218ENST00000600383 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.06■□□□□ 0.32
HIF3A-218ENST00000600383 ZNF830Q96NB3 372 aaPredicted RBP17.06■□□□□ 0.32
HIF3A-218ENST00000600383 SLC38A10Q9HBR0 1119 aa17.06■□□□□ 0.32
HIF3A-218ENST00000600383 SSC5DA1L4H1 1573 aa17.06■□□□□ 0.32
HIF3A-218ENST00000600383 ESPNB1AK53 854 aa17.06■□□□□ 0.32
HIF3A-218ENST00000600383 KCNMB3Q9NPA1 279 aa17.06■□□□□ 0.32
HIF3A-218ENST00000600383 KBTBD4Q9NVX7 518 aa17.06■□□□□ 0.32
HIF3A-218ENST00000600383 FANCLQ9NW38 375 aa17.06■□□□□ 0.32
HIF3A-218ENST00000600383 C19orf81C9J6K1 198 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 NFIBO00712 420 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 ZBED4O75132 1171 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 RPN1P04843 607 aaKnown RBP17.05■□□□□ 0.32
HIF3A-218ENST00000600383 EPHX2P34913 555 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 MAP3K9P80192 1104 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 FMR1Q06787 632 aaKnown RBP eCLIP17.05■□□□□ 0.32
HIF3A-218ENST00000600383 GRB10Q13322 594 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 VGLL4Q14135 290 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 HS1BP3Q53T59 392 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 EAPPQ56P03 285 aaPredicted RBP17.05■□□□□ 0.32
HIF3A-218ENST00000600383 SARM1Q6SZW1 724 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 MOXD1Q6UVY6 613 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.05■□□□□ 0.32
HIF3A-218ENST00000600383 SLFN12Q8IYM2 578 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 ATG4CQ96DT6 458 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 WNK4Q96J92 1243 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 DOCK1Q14185 1865 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 ATP1A3P13637 1013 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 CD44P16070 742 aaKnown RBP17.05■□□□□ 0.32
HIF3A-218ENST00000600383 STAT3P40763 770 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 STX17P56962 302 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 Q4G0T1 1027 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 CUEDC2Q9H467 287 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 TMOD4Q9NZQ9 345 aa17.05■□□□□ 0.32
HIF3A-218ENST00000600383 VWA5AO00534 786 aa17.04■□□□□ 0.32
HIF3A-218ENST00000600383 TTLL12Q14166 644 aaPredicted RBP17.04■□□□□ 0.32
HIF3A-218ENST00000600383 MBOAT7Q96N66 472 aa17.04■□□□□ 0.32
HIF3A-218ENST00000600383 PNMA5Q96PV4 448 aa17.04■□□□□ 0.32
HIF3A-218ENST00000600383 MAPK8IP1Q9UQF2 711 aa17.04■□□□□ 0.32
HIF3A-218ENST00000600383 AFG3L2Q9Y4W6 797 aa17.04■□□□□ 0.32
HIF3A-218ENST00000600383 CCT6AP40227 531 aaKnown RBP17.03■□□□□ 0.32
HIF3A-218ENST00000600383 MUM1L1Q5H9M0 696 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 SV2BQ7L1I2 683 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 ETNPPLQ8TBG4 499 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 LENG9Q96B70 501 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 HSD3B7Q9H2F3 369 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 RMND1Q9NWS8 449 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 NRBP1Q9UHY1 535 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 CSADQ9Y600 493 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 GOLGA6L6A8MZA4 724 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 MSH4O15457 936 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 COBLO75128 1261 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 CYP3A4P08684 503 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 MSNP26038 577 aaKnown RBP17.03■□□□□ 0.32
HIF3A-218ENST00000600383 CIITAP33076 1130 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 AMPD3Q01432 767 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 MCM6Q14566 821 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 ECM1Q16610 540 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 NOL9Q5SY16 702 aaKnown RBP17.03■□□□□ 0.32
HIF3A-218ENST00000600383 USP50Q70EL3 339 aaPredicted RBP17.03■□□□□ 0.32
HIF3A-218ENST00000600383 ZSCAN30Q86W11 494 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms