RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 IKBKEQ14164 716 aa21.04■□□□□ 0.96
SSBP4-207ENST00000600244 CTC1Q2NKJ3 1217 aa21.04■□□□□ 0.96
SSBP4-207ENST00000600244 MUM1L1Q5H9M0 696 aa21.04■□□□□ 0.96
SSBP4-207ENST00000600244 EP400NLQ6ZTU2 488 aa21.04■□□□□ 0.96
SSBP4-207ENST00000600244 DDRGK1Q96HY6 314 aa21.04■□□□□ 0.96
SSBP4-207ENST00000600244 CLDND1Q9NY35 253 aa21.04■□□□□ 0.96
SSBP4-207ENST00000600244 LCTP09848 1927 aa21.04■□□□□ 0.96
SSBP4-207ENST00000600244 IPO8O15397 1037 aaKnown RBP21.03■□□□□ 0.96
SSBP4-207ENST00000600244 MBTPS2O43462 519 aa21.03■□□□□ 0.96
SSBP4-207ENST00000600244 BMP3P12645 472 aa21.03■□□□□ 0.96
SSBP4-207ENST00000600244 BRDTQ58F21 947 aaPredicted RBP21.03■□□□□ 0.96
SSBP4-207ENST00000600244 ERMP1Q7Z2K6 904 aa21.03■□□□□ 0.96
SSBP4-207ENST00000600244 SESTD1Q86VW0 696 aa21.03■□□□□ 0.96
SSBP4-207ENST00000600244 SUGP1Q8IWZ8 645 aaKnown RBP21.03■□□□□ 0.96
SSBP4-207ENST00000600244 FBXL6Q8N531 539 aa21.03■□□□□ 0.96
SSBP4-207ENST00000600244 SAMD11Q96NU1 681 aa21.03■□□□□ 0.96
SSBP4-207ENST00000600244 NSUN3Q9H649 340 aaKnown RBP21.03■□□□□ 0.96
SSBP4-207ENST00000600244 RIF1Q5UIP0 2472 aaKnown RBP21.03■□□□□ 0.96
SSBP4-207ENST00000600244 TMEM232C9JQI7 657 aa21.02■□□□□ 0.96
SSBP4-207ENST00000600244 RBAK-RBAKDNI3L0D1 243 aa21.02■□□□□ 0.96
SSBP4-207ENST00000600244 NCK2O43639 380 aa21.02■□□□□ 0.96
SSBP4-207ENST00000600244 MKRN4PQ13434 485 aaPredicted RBP21.02■□□□□ 0.96
SSBP4-207ENST00000600244 GPM6BQ13491 265 aa21.02■□□□□ 0.96
SSBP4-207ENST00000600244 SLFN13Q68D06 897 aa21.02■□□□□ 0.96
SSBP4-207ENST00000600244 GDF6Q6KF10 455 aaPredicted RBP21.02■□□□□ 0.96
SSBP4-207ENST00000600244 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.02■□□□□ 0.96
SSBP4-207ENST00000600244 RPAINQ86UA6 219 aa21.02■□□□□ 0.96
SSBP4-207ENST00000600244 IRF2BPLQ9H1B7 796 aa21.02■□□□□ 0.96
SSBP4-207ENST00000600244 SLC4A4Q9Y6R1 1079 aa21.02■□□□□ 0.96
SSBP4-207ENST00000600244 KMT2EQ8IZD2 1858 aa21.01■□□□□ 0.95
SSBP4-207ENST00000600244 LOC102724159A0A0B4J2E5 919 aa21.01■□□□□ 0.95
SSBP4-207ENST00000600244 PROB1E7EW31 1015 aa21.01■□□□□ 0.95
SSBP4-207ENST00000600244 CKBP12277 381 aa21.01■□□□□ 0.95
SSBP4-207ENST00000600244 DLX2Q07687 328 aaPredicted RBP21.01■□□□□ 0.95
SSBP4-207ENST00000600244 PWP2Q15269 919 aaKnown RBP21.01■□□□□ 0.95
SSBP4-207ENST00000600244 SBK1Q52WX2 424 aa21.01■□□□□ 0.95
SSBP4-207ENST00000600244 LRRC47Q8N1G4 583 aaKnown RBP21.01■□□□□ 0.95
SSBP4-207ENST00000600244 CLUAP1Q96AJ1 413 aa21.01■□□□□ 0.95
SSBP4-207ENST00000600244 CEP95Q96GE4 821 aa21.01■□□□□ 0.95
SSBP4-207ENST00000600244 DNAJC2Q99543 621 aaKnown RBP21.01■□□□□ 0.95
SSBP4-207ENST00000600244 C1orf115Q9H7X2 142 aa21.01■□□□□ 0.95
SSBP4-207ENST00000600244 MKNK2Q9HBH9 465 aa21.01■□□□□ 0.95
SSBP4-207ENST00000600244 MTMR4Q9NYA4 1195 aa21.01■□□□□ 0.95
SSBP4-207ENST00000600244 ARPP21Q9UBL0 812 aaPredicted RBP21.01■□□□□ 0.95
SSBP4-207ENST00000600244 MYH4Q9Y623 1939 aa21.01■□□□□ 0.95
SSBP4-207ENST00000600244 NKRFO15226 690 aaKnown RBP eCLIP21■□□□□ 0.95
SSBP4-207ENST00000600244 CHGBP05060 677 aa21■□□□□ 0.95
SSBP4-207ENST00000600244 ALDH5A1P51649 535 aaPredicted RBP21■□□□□ 0.95
SSBP4-207ENST00000600244 STAT2P52630 851 aa21■□□□□ 0.95
SSBP4-207ENST00000600244 TRAF7Q6Q0C0 670 aa21■□□□□ 0.95
SSBP4-207ENST00000600244 FAM160B2Q86V87 743 aa21■□□□□ 0.95
SSBP4-207ENST00000600244 TMEM57Q8N5G2 664 aa21■□□□□ 0.95
SSBP4-207ENST00000600244 CHURC1Q8WUH1 139 aa21■□□□□ 0.95
SSBP4-207ENST00000600244 STAG1Q8WVM7 1258 aa21■□□□□ 0.95
SSBP4-207ENST00000600244 RAD50Q92878 1312 aa21■□□□□ 0.95
SSBP4-207ENST00000600244 ZXDAP98168 799 aa20.99■□□□□ 0.95
SSBP4-207ENST00000600244 NSMFQ6X4W1 530 aa20.99■□□□□ 0.95
SSBP4-207ENST00000600244 ATOH1Q92858 354 aaPredicted RBP20.99■□□□□ 0.95
SSBP4-207ENST00000600244 COPS5Q92905 334 aa20.99■□□□□ 0.95
SSBP4-207ENST00000600244 ADD3Q9UEY8 706 aaKnown RBP20.99■□□□□ 0.95
SSBP4-207ENST00000600244 FAM186AA6NE01 2351 aa20.99■□□□□ 0.95
SSBP4-207ENST00000600244 PLXNA3P51805 1871 aa20.98■□□□□ 0.95
SSBP4-207ENST00000600244 STXBP3O00186 592 aa20.98■□□□□ 0.95
SSBP4-207ENST00000600244 PLA2G6O60733 806 aa20.98■□□□□ 0.95
SSBP4-207ENST00000600244 TTLL1O95922 423 aa20.98■□□□□ 0.95
SSBP4-207ENST00000600244 BAATQ14032 418 aaPredicted RBP20.98■□□□□ 0.95
SSBP4-207ENST00000600244 MBTPS1Q14703 1052 aa20.98■□□□□ 0.95
SSBP4-207ENST00000600244 CLUL1Q15846 466 aa20.98■□□□□ 0.95
SSBP4-207ENST00000600244 ERC1Q8IUD2 1116 aa20.98■□□□□ 0.95
SSBP4-207ENST00000600244 STK11IPQ8N1F8 1099 aa20.98■□□□□ 0.95
SSBP4-207ENST00000600244 DCHS1Q96JQ0 3298 aa20.97■□□□□ 0.95
SSBP4-207ENST00000600244 VCPP55072 806 aaKnown RBP20.97■□□□□ 0.95
SSBP4-207ENST00000600244 SMAD4Q13485 552 aaKnown RBP20.97■□□□□ 0.95
SSBP4-207ENST00000600244 PPP2R5BQ15173 497 aa20.97■□□□□ 0.95
SSBP4-207ENST00000600244 UBE3CQ15386 1083 aa20.97■□□□□ 0.95
SSBP4-207ENST00000600244 ASCL5Q7RTU5 278 aa20.97■□□□□ 0.95
SSBP4-207ENST00000600244 TMEM192Q8IY95 271 aa20.97■□□□□ 0.95
SSBP4-207ENST00000600244 IL1RAPL2Q9NP60 686 aa20.97■□□□□ 0.95
SSBP4-207ENST00000600244 EXOC6BQ9Y2D4 811 aa20.97■□□□□ 0.95
SSBP4-207ENST00000600244 MICAL3Q7RTP6 2002 aa20.96■□□□□ 0.95
SSBP4-207ENST00000600244 AVPR2P30518 371 aa20.96■□□□□ 0.95
SSBP4-207ENST00000600244 SNAP25P60880 206 aa20.96■□□□□ 0.95
SSBP4-207ENST00000600244 HYAL1Q12794 435 aa20.96■□□□□ 0.95
SSBP4-207ENST00000600244 TRIM71Q2Q1W2 868 aaKnown RBP20.96■□□□□ 0.95
SSBP4-207ENST00000600244 FBXO11Q86XK2 927 aa20.96■□□□□ 0.95
SSBP4-207ENST00000600244 KAT2BQ92831 832 aa20.96■□□□□ 0.95
SSBP4-207ENST00000600244 GMCL1Q96IK5 515 aa20.96■□□□□ 0.95
SSBP4-207ENST00000600244 PAG1Q9NWQ8 432 aa20.96■□□□□ 0.95
SSBP4-207ENST00000600244 LGR5O75473 907 aa20.95■□□□□ 0.94
SSBP4-207ENST00000600244 AMHP03971 560 aa20.95■□□□□ 0.94
SSBP4-207ENST00000600244 CHMP4BP1P59074 171 aa20.95■□□□□ 0.94
SSBP4-207ENST00000600244 MYOCDQ8IZQ8 938 aa20.95■□□□□ 0.94
SSBP4-207ENST00000600244 SCFD2Q8WU76 684 aa20.95■□□□□ 0.94
SSBP4-207ENST00000600244 PUS7LQ9H0K6 701 aaKnown RBP20.95■□□□□ 0.94
SSBP4-207ENST00000600244 COL4A6Q14031 1691 aa20.95■□□□□ 0.94
SSBP4-207ENST00000600244 ZNF618Q5T7W0 954 aa20.94■□□□□ 0.94
SSBP4-207ENST00000600244 ZNF444Q8N0Y2 327 aaPredicted RBP20.94■□□□□ 0.94
SSBP4-207ENST00000600244 DBF4BQ8NFT6 615 aa20.94■□□□□ 0.94
SSBP4-207ENST00000600244 FRAT1Q92837 279 aaPredicted RBP20.94■□□□□ 0.94
SSBP4-207ENST00000600244 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.94■□□□□ 0.943e-11■■■■■ 45.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms