RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
HIF3A-217ENST00000600236 PFKMP08237 780 aa13.32□□□□□ -0.28
HIF3A-217ENST00000600236 SART3Q15020 963 aaKnown RBP13.32□□□□□ -0.28
HIF3A-217ENST00000600236 RAB30Q15771 203 aa13.32□□□□□ -0.28
HIF3A-217ENST00000600236 STXBP2Q15833 593 aa13.32□□□□□ -0.28
HIF3A-217ENST00000600236 ARHGEF16Q5VV41 709 aa13.32□□□□□ -0.28
HIF3A-217ENST00000600236 C16orf59Q7L2K0 433 aa13.32□□□□□ -0.28
HIF3A-217ENST00000600236 RALYLQ86SE5 291 aaKnown RBP13.32□□□□□ -0.28
HIF3A-217ENST00000600236 SYTL5Q8TDW5 730 aaPredicted RBP13.32□□□□□ -0.28
HIF3A-217ENST00000600236 HERVK_113Q902F9 699 aa13.32□□□□□ -0.28
HIF3A-217ENST00000600236 IWS1Q96ST2 819 aa13.32□□□□□ -0.28
HIF3A-217ENST00000600236 NOC4LQ9BVI4 516 aaKnown RBP13.32□□□□□ -0.28
HIF3A-217ENST00000600236 TRPV6Q9H1D0 765 aa13.32□□□□□ -0.28
HIF3A-217ENST00000600236 ZNF576Q9H609 170 aa13.32□□□□□ -0.28
HIF3A-217ENST00000600236 JMJD4Q9H9V9 463 aa13.32□□□□□ -0.28
HIF3A-217ENST00000600236 PPP4R2Q9NY27 417 aa13.32□□□□□ -0.28
HIF3A-217ENST00000600236 MSRAQ9UJ68 235 aa13.32□□□□□ -0.28
HIF3A-217ENST00000600236 GRIN2DO15399 1336 aa13.32□□□□□ -0.28
HIF3A-217ENST00000600236 A6NJR5 290 aa13.31□□□□□ -0.28
HIF3A-217ENST00000600236 GH1P01241 217 aa13.31□□□□□ -0.28
HIF3A-217ENST00000600236 GSPT1P15170 499 aaKnown RBP13.31□□□□□ -0.28
HIF3A-217ENST00000600236 PDE4AP27815 886 aa13.31□□□□□ -0.28
HIF3A-217ENST00000600236 CCL23P55773 120 aa13.31□□□□□ -0.28
HIF3A-217ENST00000600236 PTPN11Q06124 597 aaPredicted RBP13.31□□□□□ -0.28
HIF3A-217ENST00000600236 RASIP1Q5U651 963 aa13.31□□□□□ -0.28
HIF3A-217ENST00000600236 NFRKBQ6P4R8 1299 aa13.31□□□□□ -0.28
HIF3A-217ENST00000600236 SEPT14Q6ZU15 432 aa13.31□□□□□ -0.28
HIF3A-217ENST00000600236 RMDN3Q96TC7 470 aa13.31□□□□□ -0.28
HIF3A-217ENST00000600236 PBX4Q9BYU1 374 aa13.31□□□□□ -0.28
HIF3A-217ENST00000600236 MAP3K20Q9NYL2 800 aaKnown RBP13.31□□□□□ -0.28
HIF3A-217ENST00000600236 NOD1Q9Y239 953 aa13.31□□□□□ -0.28
HIF3A-217ENST00000600236 MCM3APO60318 1980 aa13.31□□□□□ -0.28
HIF3A-217ENST00000600236 KLRF2D3W0D1 207 aa13.3□□□□□ -0.28
HIF3A-217ENST00000600236 ZBTB5O15062 677 aa13.3□□□□□ -0.28
HIF3A-217ENST00000600236 CFBP00751 764 aa13.3□□□□□ -0.28
HIF3A-217ENST00000600236 SAMD3Q8N6K7 520 aa13.3□□□□□ -0.28
HIF3A-217ENST00000600236 RETREG2Q8NC44 543 aa13.3□□□□□ -0.28
HIF3A-217ENST00000600236 NCOA7Q8NI08 942 aa13.3□□□□□ -0.28
HIF3A-217ENST00000600236 COPS5Q92905 334 aa13.3□□□□□ -0.28
HIF3A-217ENST00000600236 TAAR1Q96RJ0 339 aa13.3□□□□□ -0.28
HIF3A-217ENST00000600236 GAS2L1Q99501 681 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-217ENST00000600236 TRMT13Q9NUP7 481 aaKnown RBP13.3□□□□□ -0.28
HIF3A-217ENST00000600236 UMODL1Q5DID0 1318 aa13.3□□□□□ -0.28
HIF3A-217ENST00000600236 LAMA4Q16363 1823 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 ZBBXA8MT70 800 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 IFIT3O14879 490 aaKnown RBP13.29□□□□□ -0.28
HIF3A-217ENST00000600236 ACTN1P12814 892 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 CASTP20810 708 aaKnown RBP13.29□□□□□ -0.28
HIF3A-217ENST00000600236 CHMLP26374 656 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 RFC2P35250 354 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 BFSP2Q13515 415 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 GRIN2CQ14957 1233 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 SEC23AQ15436 765 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 NBPF20Q3BBV1 942 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 OTOP2Q7RTS6 562 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 CCDC155Q8N6L0 562 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 WNT8AQ9H1J5 351 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 IL25Q9H293 177 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 SLC4A7Q9Y6M7 1214 aa13.29□□□□□ -0.28
HIF3A-217ENST00000600236 GRXCR1A8MXD5 290 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 EIF3JO75822 258 aaKnown RBP13.28□□□□□ -0.28
HIF3A-217ENST00000600236 ARIH2O95376 493 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 MMP3P08254 477 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 CYP21A2P08686 494 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 CYP2C9P11712 490 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 EIF2AK2P19525 551 aaKnown RBP13.28□□□□□ -0.28
HIF3A-217ENST00000600236 IRX6P78412 446 aaPredicted RBP13.28□□□□□ -0.28
HIF3A-217ENST00000600236 WTAPQ15007 396 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 CCDC62Q6P9F0 684 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 KCNV1Q6PIU1 500 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 CYB5R4Q7L1T6 521 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 HOMER1Q86YM7 354 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 STAG2Q8N3U4 1231 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 TBC1D5Q92609 795 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 SCLYQ96I15 445 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 KATNAL1Q9BW62 490 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 SLC28A3Q9HAS3 691 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 PXMP2Q9NR77 195 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 COL20A1Q9P218 1284 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 MAD2L2Q9UI95 211 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 PCDHA1Q9Y5I3 950 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 MRVI1Q9Y6F6 885 aa13.28□□□□□ -0.28
HIF3A-217ENST00000600236 LCTP09848 1927 aa13.27□□□□□ -0.28
HIF3A-217ENST00000600236 PALM3A6NDB9 673 aaPredicted RBP13.27□□□□□ -0.29
HIF3A-217ENST00000600236 PITPNM1O00562 1244 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 SGSM2O43147 1006 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 NR3C2P08235 984 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 PBX2P40425 430 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 HSD17B4P51659 736 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 CHMP4BP1P59074 171 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 GHRHRQ02643 423 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 LAMC2Q13753 1193 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 GRM4Q14833 912 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 DGKDQ16760 1214 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 LY6KQ17RY6 165 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 CHST3Q7LGC8 479 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 CATIPQ7Z7H3 387 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 AFG1LQ8WV93 481 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 MTMR8Q96EF0 704 aa13.27□□□□□ -0.29
HIF3A-217ENST00000600236 CXXC1Q9P0U4 656 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms