RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 FRMPD3Q5JV73 1810 aa17.54■□□□□ 0.4
LIG1-219ENST00000600055 SYNRGQ9UMZ2 1314 aa17.54■□□□□ 0.4
LIG1-219ENST00000600055 MYADML2A6NDP7 307 aa17.54■□□□□ 0.4
LIG1-219ENST00000600055 DUSP11O75319 330 aaKnown RBP17.54■□□□□ 0.4
LIG1-219ENST00000600055 COL6A1P12109 1028 aa17.54■□□□□ 0.4
LIG1-219ENST00000600055 SMPD1P17405 629 aa17.54■□□□□ 0.4
LIG1-219ENST00000600055 AK2P54819 239 aa17.54■□□□□ 0.4
LIG1-219ENST00000600055 TNFAIP2Q03169 654 aa17.54■□□□□ 0.4
LIG1-219ENST00000600055 TYW1BQ6NUM6 668 aa17.54■□□□□ 0.4
LIG1-219ENST00000600055 NOL8Q76FK4 1167 aaKnown RBP17.54■□□□□ 0.4
LIG1-219ENST00000600055 SAMD3Q8N6K7 520 aa17.54■□□□□ 0.4
LIG1-219ENST00000600055 ARRDC4Q8NCT1 418 aa17.54■□□□□ 0.4
LIG1-219ENST00000600055 ZNF274Q96GC6 653 aaPredicted RBP17.54■□□□□ 0.4
LIG1-219ENST00000600055 ALDH8A1Q9H2A2 487 aaPredicted RBP17.54■□□□□ 0.4
LIG1-219ENST00000600055 TPCN1Q9ULQ1 816 aa17.54■□□□□ 0.4
LIG1-219ENST00000600055 LRRC37A2A6NM11 1700 aa17.54■□□□□ 0.4
LIG1-219ENST00000600055 B4DLN1 442 aa17.53■□□□□ 0.4
LIG1-219ENST00000600055 DNM1LO00429 736 aa17.53■□□□□ 0.4
LIG1-219ENST00000600055 MEIS2O14770 477 aa17.53■□□□□ 0.4
LIG1-219ENST00000600055 ADAMTS4O75173 837 aa17.53■□□□□ 0.4
LIG1-219ENST00000600055 NR3C2P08235 984 aa17.53■□□□□ 0.4
LIG1-219ENST00000600055 NEK4P51957 841 aa17.53■□□□□ 0.4
LIG1-219ENST00000600055 MRPL12P52815 198 aaKnown RBP17.53■□□□□ 0.4
LIG1-219ENST00000600055 IQSEC1Q6DN90 963 aa17.53■□□□□ 0.4
LIG1-219ENST00000600055 IL31RAQ8NI17 732 aa17.53■□□□□ 0.4
LIG1-219ENST00000600055 ZFP91Q96JP5 570 aaPredicted RBP17.53■□□□□ 0.4
LIG1-219ENST00000600055 IWS1Q96ST2 819 aa17.53■□□□□ 0.4
LIG1-219ENST00000600055 MPHOSPH6Q99547 160 aaKnown RBP17.53■□□□□ 0.4
LIG1-219ENST00000600055 PDCD2LQ9BRP1 358 aa17.53■□□□□ 0.4
LIG1-219ENST00000600055 SENP6Q9GZR1 1112 aaPredicted RBP17.53■□□□□ 0.4
LIG1-219ENST00000600055 PSTPIP2Q9H939 334 aa17.53■□□□□ 0.4
LIG1-219ENST00000600055 GNEQ9Y223 722 aaKnown RBP17.53■□□□□ 0.4
LIG1-219ENST00000600055 TNRC18O15417 2968 aaPredicted RBP17.53■□□□□ 0.4
LIG1-219ENST00000600055 RBM47A0AV96 593 aaKnown RBP17.52■□□□□ 0.4
LIG1-219ENST00000600055 KBTBD13C9JR72 458 aa17.52■□□□□ 0.4
LIG1-219ENST00000600055 STXBP3O00186 592 aa17.52■□□□□ 0.4
LIG1-219ENST00000600055 PRPF3O43395 683 aaKnown RBP17.52■□□□□ 0.4
LIG1-219ENST00000600055 MYCLP12524 364 aaPredicted RBP17.52■□□□□ 0.4
LIG1-219ENST00000600055 NAPAP54920 295 aa17.52■□□□□ 0.4
LIG1-219ENST00000600055 PGM5Q15124 567 aa17.52■□□□□ 0.4
LIG1-219ENST00000600055 PKN1Q16512 942 aa17.52■□□□□ 0.4
LIG1-219ENST00000600055 UBE2SQ16763 222 aa17.52■□□□□ 0.4
LIG1-219ENST00000600055 SMARCC2Q8TAQ2 1214 aa17.52■□□□□ 0.4
LIG1-219ENST00000600055 CUL5Q93034 780 aa17.52■□□□□ 0.4
LIG1-219ENST00000600055 KIF2CQ99661 725 aa17.52■□□□□ 0.4
LIG1-219ENST00000600055 SLC26A6Q9BXS9 759 aa17.52■□□□□ 0.4
LIG1-219ENST00000600055 C22orf23Q9BZE7 217 aa17.52■□□□□ 0.4
LIG1-219ENST00000600055 WDR11Q9BZH6 1224 aa17.52■□□□□ 0.4
LIG1-219ENST00000600055 PIK3CDO00329 1044 aa17.51■□□□□ 0.39
LIG1-219ENST00000600055 DTNBO60941 627 aa17.51■□□□□ 0.39
LIG1-219ENST00000600055 ARIH2O95376 493 aa17.51■□□□□ 0.39
LIG1-219ENST00000600055 C6orf222P0C671 652 aaPredicted RBP17.51■□□□□ 0.39
LIG1-219ENST00000600055 IFNAR1P17181 557 aa17.51■□□□□ 0.39
LIG1-219ENST00000600055 GJA9P57773 515 aa17.51■□□□□ 0.39
LIG1-219ENST00000600055 STXBP2Q15833 593 aa17.51■□□□□ 0.39
LIG1-219ENST00000600055 PFKFB3Q16875 520 aaPredicted RBP17.51■□□□□ 0.39
LIG1-219ENST00000600055 SEPT14Q6ZU15 432 aa17.51■□□□□ 0.39
LIG1-219ENST00000600055 RNF180Q86T96 592 aa17.51■□□□□ 0.39
LIG1-219ENST00000600055 KLHDC9Q8NEP7 349 aa17.51■□□□□ 0.39
LIG1-219ENST00000600055 DPF3Q92784 378 aa17.51■□□□□ 0.39
LIG1-219ENST00000600055 FERMT2Q96AC1 680 aa17.51■□□□□ 0.39
LIG1-219ENST00000600055 HTATIP2Q9BUP3 242 aa17.51■□□□□ 0.39
LIG1-219ENST00000600055 UPF3AQ9H1J1 476 aaKnown RBP17.51■□□□□ 0.39
LIG1-219ENST00000600055 BARHL2Q9NY43 387 aa17.51■□□□□ 0.39
LIG1-219ENST00000600055 CTAGE5O15320 804 aa17.5■□□□□ 0.39
LIG1-219ENST00000600055 DYNC1LI2O43237 492 aaPredicted RBP17.5■□□□□ 0.39
LIG1-219ENST00000600055 SCG2P13521 617 aa17.5■□□□□ 0.39
LIG1-219ENST00000600055 BEX3Q00994 111 aa17.5■□□□□ 0.39
LIG1-219ENST00000600055 SCRN1Q12765 414 aa17.5■□□□□ 0.39
LIG1-219ENST00000600055 DUSP28Q4G0W2 176 aa17.5■□□□□ 0.39
LIG1-219ENST00000600055 CCSAPQ6IQ19 270 aaPredicted RBP17.5■□□□□ 0.39
LIG1-219ENST00000600055 TLK2Q86UE8 772 aa17.5■□□□□ 0.39
LIG1-219ENST00000600055 COPS5Q92905 334 aa17.5■□□□□ 0.39
LIG1-219ENST00000600055 SMCO2A6NFE2 343 aa17.49■□□□□ 0.39
LIG1-219ENST00000600055 PFKFB2O60825 505 aa17.49■□□□□ 0.39
LIG1-219ENST00000600055 EIF3JO75822 258 aaKnown RBP17.49■□□□□ 0.39
LIG1-219ENST00000600055 LARGE1O95461 756 aa17.49■□□□□ 0.39
LIG1-219ENST00000600055 RBM25P49756 843 aaKnown RBP17.49■□□□□ 0.39
LIG1-219ENST00000600055 ATN1P54259 1190 aaPredicted RBP17.49■□□□□ 0.39
LIG1-219ENST00000600055 AKAP17AQ02040 695 aaKnown RBP17.49■□□□□ 0.39
LIG1-219ENST00000600055 ANKRD1Q15327 319 aa17.49■□□□□ 0.39
LIG1-219ENST00000600055 KCNA10Q16322 511 aa17.49■□□□□ 0.39
LIG1-219ENST00000600055 LRRC26Q2I0M4 334 aa17.49■□□□□ 0.39
LIG1-219ENST00000600055 VSIG10LQ86VR7 867 aa17.49■□□□□ 0.39
LIG1-219ENST00000600055 SCFD2Q8WU76 684 aa17.49■□□□□ 0.39
LIG1-219ENST00000600055 RNF26Q9BY78 433 aaPredicted RBP17.49■□□□□ 0.39
LIG1-219ENST00000600055 SLKQ9H2G2 1235 aaPredicted RBP17.49■□□□□ 0.39
LIG1-219ENST00000600055 SPC25Q9HBM1 224 aa17.49■□□□□ 0.39
LIG1-219ENST00000600055 PHF24Q9UPV7 400 aa17.49■□□□□ 0.39
LIG1-219ENST00000600055 FRMPD4Q14CM0 1322 aa17.48■□□□□ 0.39
LIG1-219ENST00000600055 hCG_1984214I3L0E3 225 aa17.48■□□□□ 0.39
LIG1-219ENST00000600055 CPLX1O14810 134 aa17.48■□□□□ 0.39
LIG1-219ENST00000600055 ADAMTS3O15072 1205 aa17.48■□□□□ 0.39
LIG1-219ENST00000600055 RGS20O76081 388 aa17.48■□□□□ 0.39
LIG1-219ENST00000600055 TXNP10599 105 aaKnown RBP17.48■□□□□ 0.39
LIG1-219ENST00000600055 CST5P28325 142 aaPredicted RBP17.48■□□□□ 0.39
LIG1-219ENST00000600055 CCND2P30279 289 aa17.48■□□□□ 0.39
LIG1-219ENST00000600055 ADCY7P51828 1080 aa17.48■□□□□ 0.39
LIG1-219ENST00000600055 SSRP1Q08945 709 aaKnown RBP17.48■□□□□ 0.39
LIG1-219ENST00000600055 ME3Q16798 604 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms