RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 FBXO11Q86XK2 927 aa21.84■■□□□ 1.09
PNKP-213ENST00000599543 MCF2L2Q86YR7 1114 aa21.84■■□□□ 1.09
PNKP-213ENST00000599543 IL23AQ9NPF7 189 aa21.84■■□□□ 1.09
PNKP-213ENST00000599543 MYO9BQ13459 2157 aa21.83■■□□□ 1.09
PNKP-213ENST00000599543 TXNP10599 105 aaKnown RBP21.83■■□□□ 1.09
PNKP-213ENST00000599543 TTLL4Q14679 1199 aa21.83■■□□□ 1.09
PNKP-213ENST00000599543 ZNF365Q70YC5 407 aa21.83■■□□□ 1.09
PNKP-213ENST00000599543 MYLIPQ8WY64 445 aa21.83■■□□□ 1.09
PNKP-213ENST00000599543 MTG1Q9BT17 334 aaPredicted RBP21.83■■□□□ 1.09
PNKP-213ENST00000599543 ALDH8A1Q9H2A2 487 aaPredicted RBP21.83■■□□□ 1.09
PNKP-213ENST00000599543 VAT1LQ9HCJ6 419 aa21.83■■□□□ 1.09
PNKP-213ENST00000599543 MRPL11Q9Y3B7 192 aaKnown RBP21.83■■□□□ 1.09
PNKP-213ENST00000599543 UMODL1Q5DID0 1318 aa21.82■■□□□ 1.08
PNKP-213ENST00000599543 GBF1Q92538 1859 aa21.82■■□□□ 1.08
PNKP-213ENST00000599543 NSUN6Q8TEA1 469 aaKnown RBP21.82■■□□□ 1.08
PNKP-213ENST00000599543 NOC4LQ9BVI4 516 aaKnown RBP21.82■■□□□ 1.08
PNKP-213ENST00000599543 MTIF3Q9H2K0 278 aaKnown RBP21.82■■□□□ 1.08
PNKP-213ENST00000599543 JMJD4Q9H9V9 463 aa21.82■■□□□ 1.08
PNKP-213ENST00000599543 U3KPZ7 1027 aaPredicted RBP21.82■■□□□ 1.08
PNKP-213ENST00000599543 SUPT20HL2P0C7V6 817 aa21.81■■□□□ 1.08
PNKP-213ENST00000599543 FOSL2P15408 326 aa21.81■■□□□ 1.08
PNKP-213ENST00000599543 CCL23P55773 120 aa21.81■■□□□ 1.08
PNKP-213ENST00000599543 RASIP1Q5U651 963 aa21.81■■□□□ 1.08
PNKP-213ENST00000599543 ERICH6BQ5W0A0 696 aa21.81■■□□□ 1.08
PNKP-213ENST00000599543 CYB5R4Q7L1T6 521 aa21.81■■□□□ 1.08
PNKP-213ENST00000599543 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.81■■□□□ 1.08
PNKP-213ENST00000599543 MAFAQ8NHW3 353 aaPredicted RBP21.81■■□□□ 1.08
PNKP-213ENST00000599543 SYTL5Q8TDW5 730 aaPredicted RBP21.81■■□□□ 1.08
PNKP-213ENST00000599543 TBC1D5Q92609 795 aa21.81■■□□□ 1.08
PNKP-213ENST00000599543 COPS5Q92905 334 aa21.81■■□□□ 1.08
PNKP-213ENST00000599543 TIFAQ96CG3 184 aa21.81■■□□□ 1.08
PNKP-213ENST00000599543 TRMT13Q9NUP7 481 aaKnown RBP21.81■■□□□ 1.08
PNKP-213ENST00000599543 BAZ2BQ9UIF8 2168 aaKnown RBP21.8■■□□□ 1.08
PNKP-213ENST00000599543 KLRF2D3W0D1 207 aa21.8■■□□□ 1.08
PNKP-213ENST00000599543 KPNA6O60684 536 aa21.8■■□□□ 1.08
PNKP-213ENST00000599543 CHMLP26374 656 aa21.8■■□□□ 1.08
PNKP-213ENST00000599543 SEC23AQ15436 765 aa21.8■■□□□ 1.08
PNKP-213ENST00000599543 FAM47CQ5HY64 1035 aa21.8■■□□□ 1.08
PNKP-213ENST00000599543 STAG2Q8N3U4 1231 aa21.8■■□□□ 1.08
PNKP-213ENST00000599543 TAAR1Q96RJ0 339 aa21.8■■□□□ 1.08
PNKP-213ENST00000599543 RMDN3Q96TC7 470 aa21.8■■□□□ 1.08
PNKP-213ENST00000599543 AMNQ9BXJ7 453 aa21.8■■□□□ 1.08
PNKP-213ENST00000599543 WNT8AQ9H1J5 351 aa21.8■■□□□ 1.08
PNKP-213ENST00000599543 COL20A1Q9P218 1284 aa21.8■■□□□ 1.08
PNKP-213ENST00000599543 ERICH2A1L162 156 aa21.79■■□□□ 1.08
PNKP-213ENST00000599543 A6NJR5 290 aa21.79■■□□□ 1.08
PNKP-213ENST00000599543 ARIH2O95376 493 aa21.79■■□□□ 1.08
PNKP-213ENST00000599543 FGBP02675 491 aa21.79■■□□□ 1.08
PNKP-213ENST00000599543 CYP21A2P08686 494 aa21.79■■□□□ 1.08
PNKP-213ENST00000599543 STXBP2Q15833 593 aa21.79■■□□□ 1.08
PNKP-213ENST00000599543 ARHGEF16Q5VV41 709 aa21.79■■□□□ 1.08
PNKP-213ENST00000599543 SEPT14Q6ZU15 432 aa21.79■■□□□ 1.08
PNKP-213ENST00000599543 RALYLQ86SE5 291 aaKnown RBP21.79■■□□□ 1.08
PNKP-213ENST00000599543 HERVK_113Q902F9 699 aa21.79■■□□□ 1.08
PNKP-213ENST00000599543 IWS1Q96ST2 819 aa21.79■■□□□ 1.08
PNKP-213ENST00000599543 TANC1Q9C0D5 1861 aa21.79■■□□□ 1.08
PNKP-213ENST00000599543 CFBP00751 764 aa21.78■■□□□ 1.08
PNKP-213ENST00000599543 PTH1RQ03431 593 aa21.78■■□□□ 1.08
PNKP-213ENST00000599543 NBPF20Q3BBV1 942 aa21.78■■□□□ 1.08
PNKP-213ENST00000599543 NFRKBQ6P4R8 1299 aa21.78■■□□□ 1.08
PNKP-213ENST00000599543 OTOP2Q7RTS6 562 aa21.78■■□□□ 1.08
PNKP-213ENST00000599543 RPUSD2Q8IZ73 545 aaKnown RBP21.78■■□□□ 1.08
PNKP-213ENST00000599543 PBX4Q9BYU1 374 aa21.78■■□□□ 1.08
PNKP-213ENST00000599543 ZNF576Q9H609 170 aa21.78■■□□□ 1.08
PNKP-213ENST00000599543 MAD2L2Q9UI95 211 aa21.78■■□□□ 1.08
PNKP-213ENST00000599543 SCN5AQ14524 2016 aa21.78■■□□□ 1.08
PNKP-213ENST00000599543 MYH7BA7E2Y1 1941 aa21.78■■□□□ 1.08
PNKP-213ENST00000599543 GRXCR1A8MXD5 290 aa21.77■■□□□ 1.08
PNKP-213ENST00000599543 IFIT3O14879 490 aaKnown RBP21.77■■□□□ 1.08
PNKP-213ENST00000599543 ZBTB5O15062 677 aa21.77■■□□□ 1.08
PNKP-213ENST00000599543 CYP2C9P11712 490 aa21.77■■□□□ 1.08
PNKP-213ENST00000599543 EIF2AK2P19525 551 aaKnown RBP21.77■■□□□ 1.08
PNKP-213ENST00000599543 GRIN2CQ14957 1233 aa21.77■■□□□ 1.08
PNKP-213ENST00000599543 SART3Q15020 963 aaKnown RBP21.77■■□□□ 1.08
PNKP-213ENST00000599543 SCLYQ96I15 445 aa21.77■■□□□ 1.08
PNKP-213ENST00000599543 CXXC1Q9P0U4 656 aaPredicted RBP21.77■■□□□ 1.08
PNKP-213ENST00000599543 CHD9Q3L8U1 2897 aa21.76■■□□□ 1.07
PNKP-213ENST00000599543 GH1P01241 217 aa21.76■■□□□ 1.07
PNKP-213ENST00000599543 PBX2P40425 430 aa21.76■■□□□ 1.07
PNKP-213ENST00000599543 LY6KQ17RY6 165 aa21.76■■□□□ 1.07
PNKP-213ENST00000599543 CCDC62Q6P9F0 684 aa21.76■■□□□ 1.07
PNKP-213ENST00000599543 NCOA7Q8NI08 942 aa21.76■■□□□ 1.07
PNKP-213ENST00000599543 PXMP2Q9NR77 195 aa21.76■■□□□ 1.07
PNKP-213ENST00000599543 PALM3A6NDB9 673 aaPredicted RBP21.75■■□□□ 1.07
PNKP-213ENST00000599543 SGSM2O43147 1006 aa21.75■■□□□ 1.07
PNKP-213ENST00000599543 MMP3P08254 477 aa21.75■■□□□ 1.07
PNKP-213ENST00000599543 HSD17B4P51659 736 aa21.75■■□□□ 1.07
PNKP-213ENST00000599543 CHMP4BP1P59074 171 aa21.75■■□□□ 1.07
PNKP-213ENST00000599543 WTAPQ15007 396 aa21.75■■□□□ 1.07
PNKP-213ENST00000599543 RAB30Q15771 203 aa21.75■■□□□ 1.07
PNKP-213ENST00000599543 HOMER1Q86YM7 354 aa21.75■■□□□ 1.07
PNKP-213ENST00000599543 AFG1LQ8WV93 481 aa21.75■■□□□ 1.07
PNKP-213ENST00000599543 MTMR8Q96EF0 704 aa21.75■■□□□ 1.07
PNKP-213ENST00000599543 MSRAQ9UJ68 235 aa21.75■■□□□ 1.07
PNKP-213ENST00000599543 NOD1Q9Y239 953 aa21.75■■□□□ 1.07
PNKP-213ENST00000599543 PCDHA1Q9Y5I3 950 aa21.75■■□□□ 1.07
PNKP-213ENST00000599543 TRIP12Q14669 1992 aaPredicted RBP21.75■■□□□ 1.07
PNKP-213ENST00000599543 E7EWF7 191 aa21.74■■□□□ 1.07
PNKP-213ENST00000599543 PPP1R11O60927 126 aaPredicted RBP21.74■■□□□ 1.07
PNKP-213ENST00000599543 EIF3JO75822 258 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms