RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 DLGAP5Q15398 846 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 MFSD14BQ5SR56 506 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 CASC1Q6TDU7 716 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 SAPCD2Q86UD0 394 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 C2orf69Q8N8R5 385 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 BTBD6Q96KE9 485 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 MDFIQ99750 246 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 DNAJB12Q9NXW2 375 aaKnown RBP12.42□□□□□ -0.42
SMG9-207ENST00000598860 CNTN3Q9P232 1028 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 STK17AQ9UEE5 414 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 FOCADQ5VW36 1801 aa12.41□□□□□ -0.42
SMG9-207ENST00000598860 MAST3O60307 1309 aa12.41□□□□□ -0.42
SMG9-207ENST00000598860 MMP20O60882 483 aa12.41□□□□□ -0.42
SMG9-207ENST00000598860 EIF4BP23588 611 aaKnown RBP12.41□□□□□ -0.42
SMG9-207ENST00000598860 ERCC5P28715 1186 aaPredicted RBP12.41□□□□□ -0.42
SMG9-207ENST00000598860 GRM1Q13255 1194 aa12.41□□□□□ -0.42
SMG9-207ENST00000598860 C1orf127Q8N9H9 656 aa12.41□□□□□ -0.42
SMG9-207ENST00000598860 CDCA5Q96FF9 252 aa12.41□□□□□ -0.42
SMG9-207ENST00000598860 CRELD1Q96HD1 420 aa12.41□□□□□ -0.42
SMG9-207ENST00000598860 HHIPL1Q96JK4 782 aa12.41□□□□□ -0.42
SMG9-207ENST00000598860 CAPNS2Q96L46 248 aa12.41□□□□□ -0.42
SMG9-207ENST00000598860 GBA2Q9HCG7 927 aaPredicted RBP12.41□□□□□ -0.42
SMG9-207ENST00000598860 NPHS2Q9NP85 383 aa12.41□□□□□ -0.42
SMG9-207ENST00000598860 POLR3DP05423 398 aaPredicted RBP12.4□□□□□ -0.42
SMG9-207ENST00000598860 CTSHP09668 335 aa12.4□□□□□ -0.42
SMG9-207ENST00000598860 HSPA1AP0DMV8 641 aaKnown RBP12.4□□□□□ -0.42
SMG9-207ENST00000598860 HSPA1BP0DMV9 641 aaKnown RBP12.4□□□□□ -0.42
SMG9-207ENST00000598860 RBM5P52756 815 aaKnown RBP eCLIP12.4□□□□□ -0.42
SMG9-207ENST00000598860 HUNKP57058 714 aa12.4□□□□□ -0.42
SMG9-207ENST00000598860 FANCCQ00597 558 aa12.4□□□□□ -0.42
SMG9-207ENST00000598860 CFAP100Q494V2 611 aa12.4□□□□□ -0.42
SMG9-207ENST00000598860 CYP4F22Q6NT55 531 aa12.4□□□□□ -0.42
SMG9-207ENST00000598860 CHSY3Q70JA7 882 aa12.4□□□□□ -0.42
SMG9-207ENST00000598860 ZBED3Q96IU2 234 aaPredicted RBP12.4□□□□□ -0.42
SMG9-207ENST00000598860 ANTXR1Q9H6X2 564 aa12.4□□□□□ -0.42
SMG9-207ENST00000598860 METTL5Q9NRN9 209 aaKnown RBP12.4□□□□□ -0.42
SMG9-207ENST00000598860 DIAPH3Q9NSV4 1193 aa12.4□□□□□ -0.42
SMG9-207ENST00000598860 LRP2BPQ9P2M1 347 aa12.4□□□□□ -0.42
SMG9-207ENST00000598860 ABCF2Q9UG63 623 aa12.4□□□□□ -0.42
SMG9-207ENST00000598860 RAD50Q92878 1312 aa12.39□□□□□ -0.43
SMG9-207ENST00000598860 EREGO14944 169 aa12.39□□□□□ -0.43
SMG9-207ENST00000598860 MYO1BO43795 1136 aa12.39□□□□□ -0.43
SMG9-207ENST00000598860 IDH1O75874 414 aaKnown RBP12.39□□□□□ -0.43
SMG9-207ENST00000598860 MAP4K4O95819 1239 aaPredicted RBP12.39□□□□□ -0.43
SMG9-207ENST00000598860 UBE3CQ15386 1083 aa12.39□□□□□ -0.43
SMG9-207ENST00000598860 APOBEC3FQ8IUX4 373 aaKnown RBP12.39□□□□□ -0.43
SMG9-207ENST00000598860 GALNT12Q8IXK2 581 aa12.39□□□□□ -0.43
SMG9-207ENST00000598860 RUFY2Q8WXA3 655 aa12.39□□□□□ -0.43
SMG9-207ENST00000598860 EDC3Q96F86 508 aaKnown RBP12.39□□□□□ -0.43
SMG9-207ENST00000598860 OSBPL7Q9BZF2 842 aa12.39□□□□□ -0.43
SMG9-207ENST00000598860 C12orf49Q9H741 205 aa12.39□□□□□ -0.43
SMG9-207ENST00000598860 PIH1D3Q9NQM4 214 aaKnown RBP12.39□□□□□ -0.43
SMG9-207ENST00000598860 RAI14Q9P0K7 980 aa12.39□□□□□ -0.43
SMG9-207ENST00000598860 TTF2Q9UNY4 1162 aaKnown RBP12.39□□□□□ -0.43
SMG9-207ENST00000598860 SCAF8Q9UPN6 1271 aaKnown RBP12.39□□□□□ -0.43
SMG9-207ENST00000598860 ZBTB42B2RXF5 422 aa12.38□□□□□ -0.43
SMG9-207ENST00000598860 GIPC1O14908 333 aa12.38□□□□□ -0.43
SMG9-207ENST00000598860 PSAPP07602 524 aa12.38□□□□□ -0.43
SMG9-207ENST00000598860 LDHCP07864 332 aa12.38□□□□□ -0.43
SMG9-207ENST00000598860 NF2P35240 595 aa12.38□□□□□ -0.43
SMG9-207ENST00000598860 ADD2P35612 726 aa12.38□□□□□ -0.43
SMG9-207ENST00000598860 GSTO1P78417 241 aa12.38□□□□□ -0.43
SMG9-207ENST00000598860 MAP2K1Q02750 393 aaPredicted RBP12.38□□□□□ -0.43
SMG9-207ENST00000598860 MLLT1Q03111 559 aaPredicted RBP12.38□□□□□ -0.43
SMG9-207ENST00000598860 TTC39BQ5VTQ0 682 aaPredicted RBP12.38□□□□□ -0.43
SMG9-207ENST00000598860 PRAMEF18Q5VWM3 479 aa12.38□□□□□ -0.43
SMG9-207ENST00000598860 METTL16Q86W50 562 aaKnown RBP12.38□□□□□ -0.43
SMG9-207ENST00000598860 DZIP1Q86YF9 867 aaKnown RBP12.38□□□□□ -0.43
SMG9-207ENST00000598860 CERS3Q8IU89 383 aa12.38□□□□□ -0.43
SMG9-207ENST00000598860 PRMT6Q96LA8 375 aaPredicted RBP12.38□□□□□ -0.43
SMG9-207ENST00000598860 SLC6A14Q9UN76 642 aa12.38□□□□□ -0.43
SMG9-207ENST00000598860 MYH1P12882 1939 aa12.37□□□□□ -0.43
SMG9-207ENST00000598860 RNF113AO15541 343 aaKnown RBP12.37□□□□□ -0.43
SMG9-207ENST00000598860 PRDX5P30044 214 aa12.37□□□□□ -0.43
SMG9-207ENST00000598860 MAP2K2P36507 400 aa12.37□□□□□ -0.43
SMG9-207ENST00000598860 ZNF76P36508 570 aa12.37□□□□□ -0.43
SMG9-207ENST00000598860 FKBP1BP68106 108 aa12.37□□□□□ -0.43
SMG9-207ENST00000598860 RGMBQ6NW40 437 aa12.37□□□□□ -0.43
SMG9-207ENST00000598860 APPBP2Q92624 585 aa12.37□□□□□ -0.43
SMG9-207ENST00000598860 RNF34Q969K3 372 aa12.37□□□□□ -0.43
SMG9-207ENST00000598860 PCDHAC2Q9Y5I4 1007 aa12.37□□□□□ -0.43
SMG9-207ENST00000598860 NAV1Q8NEY1 1877 aa12.37□□□□□ -0.43
SMG9-207ENST00000598860 LAMA4Q16363 1823 aa12.37□□□□□ -0.43
SMG9-207ENST00000598860 AOC2O75106 756 aa12.36□□□□□ -0.43
SMG9-207ENST00000598860 PDE6AP16499 860 aa12.36□□□□□ -0.43
SMG9-207ENST00000598860 CES1P23141 567 aa12.36□□□□□ -0.43
SMG9-207ENST00000598860 CHMLP26374 656 aa12.36□□□□□ -0.43
SMG9-207ENST00000598860 CRKP46108 304 aa12.36□□□□□ -0.43
SMG9-207ENST00000598860 PLAURQ03405 335 aa12.36□□□□□ -0.43
SMG9-207ENST00000598860 SLC9C2Q5TAH2 1124 aa12.36□□□□□ -0.43
SMG9-207ENST00000598860 NAA16Q6N069 864 aaPredicted RBP12.36□□□□□ -0.43
SMG9-207ENST00000598860 NT5DC4Q86YG4 428 aa12.36□□□□□ -0.43
SMG9-207ENST00000598860 MAGEB6Q8N7X4 407 aa12.36□□□□□ -0.43
SMG9-207ENST00000598860 PMEPA1Q969W9 287 aa12.36□□□□□ -0.43
SMG9-207ENST00000598860 NSUN4Q96CB9 384 aaKnown RBP12.36□□□□□ -0.43
SMG9-207ENST00000598860 MRIQ9BWK5 157 aa12.36□□□□□ -0.43
SMG9-207ENST00000598860 DEFB129Q9H1M3 183 aa12.36□□□□□ -0.43
SMG9-207ENST00000598860 HELLSQ9NRZ9 838 aa12.36□□□□□ -0.43
SMG9-207ENST00000598860 BAZ2AQ9UIF9 1905 aaKnown RBP12.36□□□□□ -0.43
SMG9-207ENST00000598860 LAMB1P07942 1786 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms