RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 CWC27Q6UX04 472 aaKnown RBP12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 SPRED2Q7Z698 418 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 ADGRF4Q8IZF3 695 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 ENAHQ8N8S7 591 aaPredicted RBP12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 RGS22Q8NE09 1264 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 KAT2BQ92831 832 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 SEZ6LQ9BYH1 1024 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 POLR3EQ9NVU0 708 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 ZSWIM5Q9P217 1185 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 ZBTB47Q9UFB7 747 aaPredicted RBP12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 MSRAQ9UJ68 235 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 SLC4A7Q9Y6M7 1214 aa12.94□□□□□ -0.34
GRAMD1A-209ENST00000598580 SCN10AQ9Y5Y9 1956 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 B4E1Z4 1266 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 PPP1R11O60927 126 aaPredicted RBP12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 CPT1AP50416 773 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 PPP2R5BQ15173 497 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 RAB30Q15771 203 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 CDC37Q16543 378 aaPredicted RBP12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 LY6KQ17RY6 165 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 QRICH1Q2TAL8 776 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 TJAP1Q5JTD0 557 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 STAG2Q8N3U4 1231 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 PNMA1Q8ND90 353 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 DNERQ8NFT8 737 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 EXOC6Q8TAG9 804 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 SCFD2Q8WU76 684 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 AFG1LQ8WV93 481 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 ESR2Q92731 530 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 JMJD4Q9H9V9 463 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 SLC28A3Q9HAS3 691 aa12.93□□□□□ -0.34
GRAMD1A-209ENST00000598580 PRRC2BQ5JSZ5 2229 aaKnown RBP12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 ZNF213O14771 459 aa12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 IQCF3P0C7M6 154 aa12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 PCP11498 1178 aaKnown RBP12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 ATP2A2P16615 1042 aaKnown RBP12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 IGFBP4P22692 258 aa12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 ARHGAP1Q07960 439 aa12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 HIC1Q14526 733 aa12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 FAM47CQ5HY64 1035 aa12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 GPATCH4Q5T3I0 446 aaKnown RBP12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 NFRKBQ6P4R8 1299 aa12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 RPUSD2Q8IZ73 545 aaKnown RBP12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 DHX38Q92620 1227 aaKnown RBP12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 ZSCAN10Q96SZ4 725 aaPredicted RBP12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 GAS2L1Q99501 681 aaPredicted RBP12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 VAT1LQ9HCJ6 419 aa12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 PCDHA11Q9Y5I1 949 aa12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 TET1Q8NFU7 2136 aa12.92□□□□□ -0.34
GRAMD1A-209ENST00000598580 SCN5AQ14524 2016 aa12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 ZBBXA8MT70 800 aa12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 NKRFO15226 690 aaKnown RBP eCLIP12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 RGS20O76081 388 aa12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 SUPT20HL2P0C7V6 817 aa12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 PDE4AP27815 886 aa12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 KRT40Q6A162 431 aa12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 GDF6Q6KF10 455 aaPredicted RBP12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 SEPT14Q6ZU15 432 aa12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 CYB5R4Q7L1T6 521 aa12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 TMCO2Q7Z6W1 182 aaPredicted RBP12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 ASB2Q96Q27 587 aa12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 RWDD1Q9H446 243 aaPredicted RBP12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 RNF41Q9H4P4 317 aaPredicted RBP12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 CERS4Q9HA82 394 aa12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 SENP2Q9HC62 589 aa12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 DDX41Q9UJV9 622 aaKnown RBP12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 TAF6LQ9Y6J9 622 aa12.91□□□□□ -0.34
GRAMD1A-209ENST00000598580 CA3P07451 260 aa12.9□□□□□ -0.34
GRAMD1A-209ENST00000598580 MMP3P08254 477 aa12.9□□□□□ -0.34
GRAMD1A-209ENST00000598580 CHMP4BP1P59074 171 aa12.9□□□□□ -0.34
GRAMD1A-209ENST00000598580 SEC23AQ15436 765 aa12.9□□□□□ -0.34
GRAMD1A-209ENST00000598580 TRAF7Q6Q0C0 670 aa12.9□□□□□ -0.34
GRAMD1A-209ENST00000598580 CHST3Q7LGC8 479 aa12.9□□□□□ -0.34
GRAMD1A-209ENST00000598580 WNT8BQ93098 351 aa12.9□□□□□ -0.34
GRAMD1A-209ENST00000598580 ZFP91Q96JP5 570 aaPredicted RBP12.9□□□□□ -0.34
GRAMD1A-209ENST00000598580 BCAS3Q9H6U6 928 aa12.9□□□□□ -0.34
GRAMD1A-209ENST00000598580 GPHNQ9NQX3 736 aaPredicted RBP12.9□□□□□ -0.34
GRAMD1A-209ENST00000598580 PNMA2Q9UL42 364 aa12.9□□□□□ -0.34
GRAMD1A-209ENST00000598580 GBF1Q92538 1859 aa12.9□□□□□ -0.34
GRAMD1A-209ENST00000598580 ABCB11O95342 1321 aa12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 KPNA6O60684 536 aa12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 EIF2AK2P19525 551 aaKnown RBP12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 ZNF200P98182 395 aaPredicted RBP12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 SP2Q02086 613 aa12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 TFF2Q03403 129 aa12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 PTPN11Q06124 597 aaPredicted RBP12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 PPP2R2DQ66LE6 453 aa12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 IL31RAQ8NI17 732 aa12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 NSUN6Q8TEA1 469 aaKnown RBP12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 ATXN2LQ8WWM7 1075 aaKnown RBP12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 GPKOWQ92917 476 aaPredicted RBP eCLIP12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 MTMR8Q96EF0 704 aa12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 NECAB3Q96P71 396 aaPredicted RBP12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 RMDN3Q96TC7 470 aa12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 DSCC1Q9BVC3 393 aa12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 MTIF3Q9H2K0 278 aaKnown RBP12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 KAT14Q9H8E8 782 aa12.89□□□□□ -0.35
GRAMD1A-209ENST00000598580 XIRP2A4UGR9 3374 aa12.88□□□□□ -0.35
GRAMD1A-209ENST00000598580 LCHNA4D1U4 455 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms