RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 GOLGA8BA8MQT2 603 aa20.37■□□□□ 0.85
USHBP1-209ENST00000598570 GCOM1H8Y6P7 765 aaPredicted RBP20.37■□□□□ 0.85
USHBP1-209ENST00000598570 POLR2MP0CAP2 368 aa20.37■□□□□ 0.85
USHBP1-209ENST00000598570 SMPD1P17405 629 aa20.37■□□□□ 0.85
USHBP1-209ENST00000598570 TNFAIP2Q03169 654 aa20.37■□□□□ 0.85
USHBP1-209ENST00000598570 DUSP28Q4G0W2 176 aa20.37■□□□□ 0.85
USHBP1-209ENST00000598570 MPHOSPH6Q99547 160 aaKnown RBP20.37■□□□□ 0.85
USHBP1-209ENST00000598570 SEC63Q9UGP8 760 aaKnown RBP20.37■□□□□ 0.85
USHBP1-209ENST00000598570 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.36■□□□□ 0.85
USHBP1-209ENST00000598570 hCG_1984214I3L0E3 225 aa20.36■□□□□ 0.85
USHBP1-209ENST00000598570 EIF3JO75822 258 aaKnown RBP20.36■□□□□ 0.85
USHBP1-209ENST00000598570 CFBP00751 764 aa20.36■□□□□ 0.85
USHBP1-209ENST00000598570 NR3C2P08235 984 aa20.36■□□□□ 0.85
USHBP1-209ENST00000598570 IFNAR1P17181 557 aa20.36■□□□□ 0.85
USHBP1-209ENST00000598570 ADCYAP1R1P41586 468 aa20.36■□□□□ 0.85
USHBP1-209ENST00000598570 METAP2P50579 478 aaKnown RBP eCLIP20.36■□□□□ 0.85
USHBP1-209ENST00000598570 ANO1Q5XXA6 986 aa20.36■□□□□ 0.85
USHBP1-209ENST00000598570 RNF180Q86T96 592 aa20.36■□□□□ 0.85
USHBP1-209ENST00000598570 ZNF713Q8N859 430 aaPredicted RBP20.36■□□□□ 0.85
USHBP1-209ENST00000598570 PDCD2LQ9BRP1 358 aa20.36■□□□□ 0.85
USHBP1-209ENST00000598570 UPF3BQ9BZI7 483 aaKnown RBP20.36■□□□□ 0.85
USHBP1-209ENST00000598570 V9GY48 417 aaPredicted RBP20.36■□□□□ 0.85
USHBP1-209ENST00000598570 PRPF3O43395 683 aaKnown RBP20.35■□□□□ 0.85
USHBP1-209ENST00000598570 PGK1P00558 417 aa20.35■□□□□ 0.85
USHBP1-209ENST00000598570 FGD1P98174 961 aa20.35■□□□□ 0.85
USHBP1-209ENST00000598570 PDE4DQ08499 809 aa20.35■□□□□ 0.85
USHBP1-209ENST00000598570 PKN1Q16512 942 aa20.35■□□□□ 0.85
USHBP1-209ENST00000598570 GJC2Q5T442 439 aaPredicted RBP20.35■□□□□ 0.85
USHBP1-209ENST00000598570 PPP1R18Q6NYC8 613 aa20.35■□□□□ 0.85
USHBP1-209ENST00000598570 FBXO16Q8IX29 292 aaPredicted RBP20.35■□□□□ 0.85
USHBP1-209ENST00000598570 LENG1Q96BZ8 264 aaPredicted RBP20.35■□□□□ 0.85
USHBP1-209ENST00000598570 PDRG1Q9NUG6 133 aa20.35■□□□□ 0.85
USHBP1-209ENST00000598570 NKRFO15226 690 aaKnown RBP eCLIP20.34■□□□□ 0.85
USHBP1-209ENST00000598570 RGS20O76081 388 aa20.34■□□□□ 0.85
USHBP1-209ENST00000598570 HOXA13P31271 388 aaPredicted RBP20.34■□□□□ 0.85
USHBP1-209ENST00000598570 STXBP2Q15833 593 aa20.34■□□□□ 0.85
USHBP1-209ENST00000598570 PFKFB3Q16875 520 aaPredicted RBP20.34■□□□□ 0.85
USHBP1-209ENST00000598570 TMEM63BQ5T3F8 832 aa20.34■□□□□ 0.85
USHBP1-209ENST00000598570 TYW1BQ6NUM6 668 aa20.34■□□□□ 0.85
USHBP1-209ENST00000598570 CCDC82Q8N4S0 544 aa20.34■□□□□ 0.85
USHBP1-209ENST00000598570 SCFD2Q8WU76 684 aa20.34■□□□□ 0.85
USHBP1-209ENST00000598570 KIF2CQ99661 725 aa20.34■□□□□ 0.85
USHBP1-209ENST00000598570 BARHL2Q9NY43 387 aa20.34■□□□□ 0.85
USHBP1-209ENST00000598570 RBM27Q9P2N5 1060 aaKnown RBP20.34■□□□□ 0.85
USHBP1-209ENST00000598570 MOXD2PA6NHM9 499 aa20.33■□□□□ 0.85
USHBP1-209ENST00000598570 PGM5Q15124 567 aa20.33■□□□□ 0.85
USHBP1-209ENST00000598570 PRPF38BQ5VTL8 546 aaKnown RBP20.33■□□□□ 0.85
USHBP1-209ENST00000598570 ARHGEF16Q5VV41 709 aa20.33■□□□□ 0.85
USHBP1-209ENST00000598570 WWC2Q6AWC2 1192 aa20.33■□□□□ 0.85
USHBP1-209ENST00000598570 XRRA1Q6P2D8 792 aa20.33■□□□□ 0.85
USHBP1-209ENST00000598570 WDR11Q9BZH6 1224 aa20.33■□□□□ 0.85
USHBP1-209ENST00000598570 PSTPIP2Q9H939 334 aa20.33■□□□□ 0.85
USHBP1-209ENST00000598570 hCG_1642624A0A1W2PR95 340 aa20.32■□□□□ 0.84
USHBP1-209ENST00000598570 MYADML2A6NDP7 307 aa20.32■□□□□ 0.84
USHBP1-209ENST00000598570 KBTBD13C9JR72 458 aa20.32■□□□□ 0.84
USHBP1-209ENST00000598570 STXBP3O00186 592 aa20.32■□□□□ 0.84
USHBP1-209ENST00000598570 STAM2O75886 525 aa20.32■□□□□ 0.84
USHBP1-209ENST00000598570 RBM25P49756 843 aaKnown RBP20.32■□□□□ 0.84
USHBP1-209ENST00000598570 ACLYP53396 1101 aa20.32■□□□□ 0.84
USHBP1-209ENST00000598570 KCNA10Q16322 511 aa20.32■□□□□ 0.84
USHBP1-209ENST00000598570 LRRC26Q2I0M4 334 aa20.32■□□□□ 0.84
USHBP1-209ENST00000598570 SLC39A5Q6ZMH5 540 aa20.32■□□□□ 0.84
USHBP1-209ENST00000598570 EEPD1Q7L9B9 569 aa20.32■□□□□ 0.84
USHBP1-209ENST00000598570 PCSK9Q8NBP7 692 aaKnown RBP20.32■□□□□ 0.84
USHBP1-209ENST00000598570 PIBF1Q8WXW3 757 aa20.32■□□□□ 0.84
USHBP1-209ENST00000598570 EMID1Q96A84 441 aaPredicted RBP20.32■□□□□ 0.84
USHBP1-209ENST00000598570 RNF26Q9BY78 433 aaPredicted RBP20.32■□□□□ 0.84
USHBP1-209ENST00000598570 SENP6Q9GZR1 1112 aaPredicted RBP20.32■□□□□ 0.84
USHBP1-209ENST00000598570 RIC8AQ9NPQ8 531 aa20.32■□□□□ 0.84
USHBP1-209ENST00000598570 ELP1O95163 1332 aa20.31■□□□□ 0.84
USHBP1-209ENST00000598570 ESYT2A0FGR8 921 aa20.31■□□□□ 0.84
USHBP1-209ENST00000598570 A6NJR5 290 aa20.31■□□□□ 0.84
USHBP1-209ENST00000598570 TGFB3P10600 412 aa20.31■□□□□ 0.84
USHBP1-209ENST00000598570 CLK2P49760 499 aaKnown RBP20.31■□□□□ 0.84
USHBP1-209ENST00000598570 MRPS9P82933 396 aaKnown RBP20.31■□□□□ 0.84
USHBP1-209ENST00000598570 USP17L6PQ6QN14 398 aa20.31■□□□□ 0.84
USHBP1-209ENST00000598570 FAM177A1Q8N128 213 aaPredicted RBP20.31■□□□□ 0.84
USHBP1-209ENST00000598570 IL31RAQ8NI17 732 aa20.31■□□□□ 0.84
USHBP1-209ENST00000598570 DDX41Q9UJV9 622 aaKnown RBP20.31■□□□□ 0.84
USHBP1-209ENST00000598570 PFKFB2O60825 505 aa20.3■□□□□ 0.84
USHBP1-209ENST00000598570 ARIH2O95376 493 aa20.3■□□□□ 0.84
USHBP1-209ENST00000598570 SCG2P13521 617 aa20.3■□□□□ 0.84
USHBP1-209ENST00000598570 EIF2AK2P19525 551 aaKnown RBP20.3■□□□□ 0.84
USHBP1-209ENST00000598570 ICAM3P32942 547 aa20.3■□□□□ 0.84
USHBP1-209ENST00000598570 CDK7P50613 346 aa20.3■□□□□ 0.84
USHBP1-209ENST00000598570 IRX5P78411 483 aaPredicted RBP20.3■□□□□ 0.84
USHBP1-209ENST00000598570 ANKRD1Q15327 319 aa20.3■□□□□ 0.84
USHBP1-209ENST00000598570 TLK2Q86UE8 772 aa20.3■□□□□ 0.84
USHBP1-209ENST00000598570 SLC43A3Q8NBI5 491 aa20.3■□□□□ 0.84
USHBP1-209ENST00000598570 INPP4AQ96PE3 977 aaPredicted RBP20.3■□□□□ 0.84
USHBP1-209ENST00000598570 ZMYND12Q9H0C1 365 aa20.3■□□□□ 0.84
USHBP1-209ENST00000598570 GLT8D2Q9H1C3 349 aa20.3■□□□□ 0.84
USHBP1-209ENST00000598570 SPC25Q9HBM1 224 aa20.3■□□□□ 0.84
USHBP1-209ENST00000598570 TPCN1Q9ULQ1 816 aa20.3■□□□□ 0.84
USHBP1-209ENST00000598570 A0A1W2PQ45 241 aaPredicted RBP20.29■□□□□ 0.84
USHBP1-209ENST00000598570 A0A1W2PQY0 241 aa20.29■□□□□ 0.84
USHBP1-209ENST00000598570 TTLL4Q14679 1199 aa20.29■□□□□ 0.84
USHBP1-209ENST00000598570 FSCN1Q16658 493 aaKnown RBP20.29■□□□□ 0.84
USHBP1-209ENST00000598570 GNASQ5JWF2 1037 aa20.29■□□□□ 0.84
USHBP1-209ENST00000598570 PCNX4Q63HM2 1172 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms