RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 USP17L19D6RCP7 530 aa9.51□□□□□ -0.89
LINC00343-206ENST00000598478 USP17L20D6RJB6 530 aa9.51□□□□□ -0.89
LINC00343-206ENST00000598478 FRAT2O75474 233 aaPredicted RBP9.51□□□□□ -0.89
LINC00343-206ENST00000598478 ZKSCAN1P17029 563 aaPredicted RBP9.51□□□□□ -0.89
LINC00343-206ENST00000598478 USP17L24Q0WX57 530 aa9.51□□□□□ -0.89
LINC00343-206ENST00000598478 PCSK7Q16549 785 aa9.51□□□□□ -0.89
LINC00343-206ENST00000598478 G2E3Q7L622 706 aa9.51□□□□□ -0.89
LINC00343-206ENST00000598478 ANKMY2Q8IV38 441 aa9.51□□□□□ -0.89
LINC00343-206ENST00000598478 TRIM43Q96BQ3 446 aaPredicted RBP9.51□□□□□ -0.89
LINC00343-206ENST00000598478 PPP1R12CQ9BZL4 782 aa9.51□□□□□ -0.89
LINC00343-206ENST00000598478 PRDM12Q9H4Q4 367 aa9.51□□□□□ -0.89
LINC00343-206ENST00000598478 DAGLAQ9Y4D2 1042 aa9.51□□□□□ -0.89
LINC00343-206ENST00000598478 FAM86C2PA6NEL3 165 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 FAM196BA6NMK8 535 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 ZNF853P0CG23 659 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 XRCC5P13010 732 aaKnown RBP9.5□□□□□ -0.89
LINC00343-206ENST00000598478 ITGB8P26012 769 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 GCLCP48506 637 aaPredicted RBP9.5□□□□□ -0.89
LINC00343-206ENST00000598478 UBE4AQ14139 1066 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 TAF7LQ5H9L4 462 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 EPHA10Q5JZY3 1008 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 CCDC30Q5VVM6 783 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 HHIPL2Q6UWX4 724 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 LMBR1LQ6UX01 489 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 KRT25Q7Z3Z0 450 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 FBXO33Q7Z6M2 555 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 VPS37DQ86XT2 251 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 TSPYL6Q8N831 410 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 TBC1D22AQ8WUA7 517 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 TP53INP1Q96A56 240 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 MRIQ9BWK5 157 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 PUS3Q9BZE2 481 aaKnown RBP9.5□□□□□ -0.89
LINC00343-206ENST00000598478 ASCC2Q9H1I8 757 aaPredicted RBP9.5□□□□□ -0.89
LINC00343-206ENST00000598478 FRRS1LQ9P0K9 344 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 ZFATQ9P243 1243 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 LOC285556D6RIA3 1793 aa9.5□□□□□ -0.89
LINC00343-206ENST00000598478 ARSDP51689 593 aa9.49□□□□□ -0.89
LINC00343-206ENST00000598478 TFF2Q03403 129 aa9.49□□□□□ -0.89
LINC00343-206ENST00000598478 TRIM60Q495X7 471 aa9.49□□□□□ -0.89
LINC00343-206ENST00000598478 TMEM31Q5JXX7 168 aa9.49□□□□□ -0.89
LINC00343-206ENST00000598478 DTWD1Q8N5C7 304 aa9.49□□□□□ -0.89
LINC00343-206ENST00000598478 USP6NLQ92738 828 aa9.49□□□□□ -0.89
LINC00343-206ENST00000598478 TIFAQ96CG3 184 aa9.49□□□□□ -0.89
LINC00343-206ENST00000598478 CALR3Q96L12 384 aaKnown RBP9.49□□□□□ -0.89
LINC00343-206ENST00000598478 LPIN3Q9BQK8 851 aa9.49□□□□□ -0.89
LINC00343-206ENST00000598478 SSBP4Q9BWG4 385 aaPredicted RBP9.49□□□□□ -0.89
LINC00343-206ENST00000598478 PDLIM7Q9NR12 457 aa9.49□□□□□ -0.89
LINC00343-206ENST00000598478 LRRFIP2Q9Y608 721 aaKnown RBP9.49□□□□□ -0.89
LINC00343-206ENST00000598478 TRIOO75962 3097 aa9.49□□□□□ -0.89
LINC00343-206ENST00000598478 PLXNA1Q9UIW2 1896 aa9.49□□□□□ -0.89
LINC00343-206ENST00000598478 ZBTB42B2RXF5 422 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 CNGA1P29973 690 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 MRE11P49959 708 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 KCNQ1P51787 676 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 HMGCS2P54868 508 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 SPP2Q13103 211 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 CCDC57Q2TAC2 916 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 PERM1Q5SV97 790 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 AKNAD1Q5T1N1 836 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 GJC2Q5T442 439 aaPredicted RBP9.48□□□□□ -0.89
LINC00343-206ENST00000598478 SLC39A5Q6ZMH5 540 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 DHX32Q7L7V1 743 aaKnown RBP9.48□□□□□ -0.89
LINC00343-206ENST00000598478 TXNRD2Q9NNW7 524 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 C11orf16Q9NQ32 467 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 USP40Q9NVE5 1235 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 MORF4L1Q9UBU8 362 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 MAST3O60307 1309 aa9.48□□□□□ -0.89
LINC00343-206ENST00000598478 C5orf42Q9H799 3197 aa9.47□□□□□ -0.89
LINC00343-206ENST00000598478 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.47□□□□□ -0.89
LINC00343-206ENST00000598478 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.47□□□□□ -0.89
LINC00343-206ENST00000598478 GRXCR1A8MXD5 290 aa9.47□□□□□ -0.89
LINC00343-206ENST00000598478 DNM1LO00429 736 aa9.47□□□□□ -0.89
LINC00343-206ENST00000598478 CTNND1O60716 968 aaKnown RBP9.47□□□□□ -0.89
LINC00343-206ENST00000598478 TARSP26639 723 aaKnown RBP9.47□□□□□ -0.89
LINC00343-206ENST00000598478 PLAURQ03405 335 aa9.47□□□□□ -0.89
LINC00343-206ENST00000598478 ELMSAN1Q6PJG2 1045 aa9.47□□□□□ -0.89
LINC00343-206ENST00000598478 FBXO11Q86XK2 927 aa9.47□□□□□ -0.89
LINC00343-206ENST00000598478 SOCS4Q8WXH5 440 aa9.47□□□□□ -0.89
LINC00343-206ENST00000598478 IFT43Q96FT9 208 aa9.47□□□□□ -0.89
LINC00343-206ENST00000598478 PORCNQ9H237 461 aa9.47□□□□□ -0.89
LINC00343-206ENST00000598478 MYH16Q9H6N6 1097 aa9.47□□□□□ -0.89
LINC00343-206ENST00000598478 VRTNQ9H8Y1 702 aa9.47□□□□□ -0.89
LINC00343-206ENST00000598478 FLRT1Q9NZU1 646 aa9.47□□□□□ -0.89
LINC00343-206ENST00000598478 DDX20Q9UHI6 824 aaKnown RBP9.47□□□□□ -0.89
LINC00343-206ENST00000598478 DDTLA6NHG4 134 aaPredicted RBP9.46□□□□□ -0.9
LINC00343-206ENST00000598478 SASH3O75995 380 aa9.46□□□□□ -0.9
LINC00343-206ENST00000598478 MICAL2O94851 1124 aa9.46□□□□□ -0.9
LINC00343-206ENST00000598478 RARAP10276 462 aa9.46□□□□□ -0.9
LINC00343-206ENST00000598478 RGS2P41220 211 aa9.46□□□□□ -0.9
LINC00343-206ENST00000598478 RGS3P49796 1198 aa9.46□□□□□ -0.9
LINC00343-206ENST00000598478 GPLD1P80108 840 aa9.46□□□□□ -0.9
LINC00343-206ENST00000598478 ANO1Q5XXA6 986 aa9.46□□□□□ -0.9
LINC00343-206ENST00000598478 WFDC8Q8IUA0 241 aa9.46□□□□□ -0.9
LINC00343-206ENST00000598478 ZSCAN29Q8IWY8 852 aaPredicted RBP9.46□□□□□ -0.9
LINC00343-206ENST00000598478 LPAR1Q92633 364 aa9.46□□□□□ -0.9
LINC00343-206ENST00000598478 FERMT2Q96AC1 680 aa9.46□□□□□ -0.9
LINC00343-206ENST00000598478 P2RX7Q99572 595 aaKnown RBP9.46□□□□□ -0.9
LINC00343-206ENST00000598478 KRTAP9-2Q9BYQ4 174 aa9.46□□□□□ -0.9
LINC00343-206ENST00000598478 ATAD5Q96QE3 1844 aa9.45□□□□□ -0.9
LINC00343-206ENST00000598478 MYH13Q9UKX3 1938 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms