RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 TTLL4Q14679 1199 aa26.74■■□□□ 1.87
SSBP4-205ENST00000598159 STXBP2Q15833 593 aa26.74■■□□□ 1.87
SSBP4-205ENST00000598159 TMTC2Q8N394 836 aa26.74■■□□□ 1.87
SSBP4-205ENST00000598159 OR6J1Q8NGC5 347 aa26.74■■□□□ 1.87
SSBP4-205ENST00000598159 TXNP10599 105 aaKnown RBP26.73■■□□□ 1.87
SSBP4-205ENST00000598159 GHRHRQ02643 423 aa26.73■■□□□ 1.87
SSBP4-205ENST00000598159 ARHGEF16Q5VV41 709 aa26.73■■□□□ 1.87
SSBP4-205ENST00000598159 MFSD5Q6N075 450 aa26.73■■□□□ 1.87
SSBP4-205ENST00000598159 CASC1Q6TDU7 716 aa26.73■■□□□ 1.87
SSBP4-205ENST00000598159 MAP3K14Q99558 947 aa26.73■■□□□ 1.87
SSBP4-205ENST00000598159 GPHNQ9NQX3 736 aaPredicted RBP26.73■■□□□ 1.87
SSBP4-205ENST00000598159 COL20A1Q9P218 1284 aa26.73■■□□□ 1.87
SSBP4-205ENST00000598159 GRIN2DO15399 1336 aa26.72■■□□□ 1.87
SSBP4-205ENST00000598159 KPNA6O60684 536 aa26.72■■□□□ 1.87
SSBP4-205ENST00000598159 MCM5P33992 734 aa26.72■■□□□ 1.87
SSBP4-205ENST00000598159 HSD17B4P51659 736 aa26.72■■□□□ 1.87
SSBP4-205ENST00000598159 NECTIN1Q15223 517 aa26.72■■□□□ 1.87
SSBP4-205ENST00000598159 FAM109BQ6ICB4 259 aaPredicted RBP26.72■■□□□ 1.87
SSBP4-205ENST00000598159 BAZ2BQ9UIF8 2168 aaKnown RBP26.71■■□□□ 1.87
SSBP4-205ENST00000598159 PNMA6FA0A0J9YX94 578 aa26.71■■□□□ 1.87
SSBP4-205ENST00000598159 SLC27A2O14975 620 aa26.71■■□□□ 1.87
SSBP4-205ENST00000598159 PPP1R11O60927 126 aaPredicted RBP26.71■■□□□ 1.87
SSBP4-205ENST00000598159 HOMER1Q86YM7 354 aa26.71■■□□□ 1.87
SSBP4-205ENST00000598159 PIGSQ96S52 555 aa26.71■■□□□ 1.87
SSBP4-205ENST00000598159 A6NJR5 290 aa26.7■■□□□ 1.86
SSBP4-205ENST00000598159 OPLAHO14841 1288 aa26.7■■□□□ 1.86
SSBP4-205ENST00000598159 CYTH3O43739 400 aa26.7■■□□□ 1.86
SSBP4-205ENST00000598159 EPHB4P54760 987 aa26.7■■□□□ 1.86
SSBP4-205ENST00000598159 PURAQ00577 322 aaKnown RBP26.7■■□□□ 1.86
SSBP4-205ENST00000598159 TMEM199Q8N511 208 aa26.7■■□□□ 1.86
SSBP4-205ENST00000598159 TMEM87BQ96K49 555 aa26.7■■□□□ 1.86
SSBP4-205ENST00000598159 LY9Q9HBG7 655 aa26.7■■□□□ 1.86
SSBP4-205ENST00000598159 ANO2Q9NQ90 1003 aa26.7■■□□□ 1.86
SSBP4-205ENST00000598159 PXMP2Q9NR77 195 aa26.7■■□□□ 1.86
SSBP4-205ENST00000598159 PRC1O43663 620 aa26.69■■□□□ 1.86
SSBP4-205ENST00000598159 EIF3JO75822 258 aaKnown RBP26.69■■□□□ 1.86
SSBP4-205ENST00000598159 NR3C2P08235 984 aa26.69■■□□□ 1.86
SSBP4-205ENST00000598159 MYL3P08590 195 aa26.69■■□□□ 1.86
SSBP4-205ENST00000598159 PSMC6P62333 389 aa26.69■■□□□ 1.86
SSBP4-205ENST00000598159 PPIGQ13427 754 aaKnown RBP eCLIP26.69■■□□□ 1.862e-8■■■■□ 22
SSBP4-205ENST00000598159 SLC35G1Q2M3R5 365 aa26.69■■□□□ 1.86
SSBP4-205ENST00000598159 CREB3L3Q68CJ9 461 aa26.69■■□□□ 1.86
SSBP4-205ENST00000598159 CCDC62Q6P9F0 684 aa26.69■■□□□ 1.86
SSBP4-205ENST00000598159 SEPT14Q6ZU15 432 aa26.69■■□□□ 1.86
SSBP4-205ENST00000598159 Q7L0L9 218 aa26.69■■□□□ 1.86
SSBP4-205ENST00000598159 COPS5Q92905 334 aa26.69■■□□□ 1.86
SSBP4-205ENST00000598159 MTG1Q9BT17 334 aaPredicted RBP26.69■■□□□ 1.86
SSBP4-205ENST00000598159 MTMR10Q9NXD2 777 aa26.69■■□□□ 1.86
SSBP4-205ENST00000598159 DDAH1O94760 285 aa26.68■■□□□ 1.86
SSBP4-205ENST00000598159 EIF2AK2P19525 551 aaKnown RBP26.68■■□□□ 1.86
SSBP4-205ENST00000598159 SMARCA1P28370 1054 aa26.68■■□□□ 1.86
SSBP4-205ENST00000598159 KIF5BP33176 963 aa26.68■■□□□ 1.86
SSBP4-205ENST00000598159 ZNF654Q8IZM8 581 aa26.68■■□□□ 1.86
SSBP4-205ENST00000598159 CTCFLQ8NI51 663 aaPredicted RBP26.68■■□□□ 1.86
SSBP4-205ENST00000598159 ARIH2O95376 493 aa26.67■■□□□ 1.86
SSBP4-205ENST00000598159 SMAD3P84022 425 aaKnown RBP26.67■■□□□ 1.86
SSBP4-205ENST00000598159 RNF20Q5VTR2 975 aa26.67■■□□□ 1.86
SSBP4-205ENST00000598159 SKAP1Q86WV1 359 aa26.67■■□□□ 1.86
SSBP4-205ENST00000598159 RNPC3Q96LT9 517 aaKnown RBP26.67■■□□□ 1.86
SSBP4-205ENST00000598159 LZTS2Q9BRK4 669 aa26.67■■□□□ 1.86
SSBP4-205ENST00000598159 KIAA1217Q5T5P2 1943 aa26.67■■□□□ 1.86
SSBP4-205ENST00000598159 CCDC69A6NI79 296 aa26.66■■□□□ 1.86
SSBP4-205ENST00000598159 GCOM1H8Y6P7 765 aaPredicted RBP26.66■■□□□ 1.86
SSBP4-205ENST00000598159 B4GALT4O60513 344 aa26.66■■□□□ 1.86
SSBP4-205ENST00000598159 GH1P01241 217 aa26.66■■□□□ 1.86
SSBP4-205ENST00000598159 SUPT20HL2P0C7V6 817 aa26.66■■□□□ 1.86
SSBP4-205ENST00000598159 POLR2MP0CAP2 368 aa26.66■■□□□ 1.86
SSBP4-205ENST00000598159 LIFRP42702 1097 aa26.66■■□□□ 1.86
SSBP4-205ENST00000598159 GNAQP50148 359 aa26.66■■□□□ 1.86
SSBP4-205ENST00000598159 NFXL1Q6ZNB6 911 aa26.66■■□□□ 1.86
SSBP4-205ENST00000598159 PPP1R12CQ9BZL4 782 aa26.66■■□□□ 1.86
SSBP4-205ENST00000598159 TRPV6Q9H1D0 765 aa26.66■■□□□ 1.86
SSBP4-205ENST00000598159 ALDH8A1Q9H2A2 487 aaPredicted RBP26.66■■□□□ 1.86
SSBP4-205ENST00000598159 CALM1P0DP23 149 aa26.65■■□□□ 1.86
SSBP4-205ENST00000598159 CALM2P0DP24 149 aa26.65■■□□□ 1.86
SSBP4-205ENST00000598159 CALM3P0DP25 149 aa26.65■■□□□ 1.86
SSBP4-205ENST00000598159 LY6KQ17RY6 165 aa26.65■■□□□ 1.86
SSBP4-205ENST00000598159 PDCD2LQ9BRP1 358 aa26.65■■□□□ 1.86
SSBP4-205ENST00000598159 SPZ1Q9BXG8 430 aa26.65■■□□□ 1.86
SSBP4-205ENST00000598159 HIPK3Q9H422 1215 aa26.65■■□□□ 1.86
SSBP4-205ENST00000598159 SH2B2O14492 632 aaPredicted RBP26.64■■□□□ 1.86
SSBP4-205ENST00000598159 CSF2RAP15509 400 aa26.64■■□□□ 1.86
SSBP4-205ENST00000598159 HOXA13P31271 388 aaPredicted RBP26.64■■□□□ 1.86
SSBP4-205ENST00000598159 CYP2C18P33260 490 aa26.64■■□□□ 1.86
SSBP4-205ENST00000598159 DDX41Q9UJV9 622 aaKnown RBP26.64■■□□□ 1.86
SSBP4-205ENST00000598159 NBPF20Q3BBV1 942 aa26.63■■□□□ 1.85
SSBP4-205ENST00000598159 TMEM240Q5SV17 173 aa26.63■■□□□ 1.85
SSBP4-205ENST00000598159 ZNF697Q5TEC3 545 aa26.63■■□□□ 1.85
SSBP4-205ENST00000598159 NFRKBQ6P4R8 1299 aa26.63■■□□□ 1.85
SSBP4-205ENST00000598159 KCNV1Q6PIU1 500 aa26.63■■□□□ 1.85
SSBP4-205ENST00000598159 C16orf59Q7L2K0 433 aa26.63■■□□□ 1.85
SSBP4-205ENST00000598159 VSIG10LQ86VR7 867 aa26.63■■□□□ 1.85
SSBP4-205ENST00000598159 RRP36Q96EU6 259 aaKnown RBP26.63■■□□□ 1.85
SSBP4-205ENST00000598159 CCDC136Q96JN2 1154 aa26.63■■□□□ 1.85
SSBP4-205ENST00000598159 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.63■■□□□ 1.852e-9■□□□□ 10.9
SSBP4-205ENST00000598159 MYL10Q9BUA6 226 aa26.63■■□□□ 1.85
SSBP4-205ENST00000598159 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.62■■□□□ 1.85
SSBP4-205ENST00000598159 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.62■■□□□ 1.85
SSBP4-205ENST00000598159 CDC45O75419 566 aa26.62■■□□□ 1.85
SSBP4-205ENST00000598159 MYCLP12524 364 aaPredicted RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms