RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 NAP1L2Q9ULW6 460 aaPredicted RBP19.33■□□□□ 0.68
SSBP4-204ENST00000597724 PHF24Q9UPV7 400 aa19.33■□□□□ 0.68
SSBP4-204ENST00000597724 NR2E3Q9Y5X4 410 aa19.33■□□□□ 0.68
SSBP4-204ENST00000597724 CST5P28325 142 aaPredicted RBP19.32■□□□□ 0.68
SSBP4-204ENST00000597724 ADD1P35611 737 aaKnown RBP19.32■□□□□ 0.68
SSBP4-204ENST00000597724 EVCP57679 992 aa19.32■□□□□ 0.68
SSBP4-204ENST00000597724 NKX3-2P78367 333 aa19.32■□□□□ 0.68
SSBP4-204ENST00000597724 IRX5P78411 483 aaPredicted RBP19.32■□□□□ 0.68
SSBP4-204ENST00000597724 TMEM63BQ5T3F8 832 aa19.32■□□□□ 0.68
SSBP4-204ENST00000597724 ARHGEF16Q5VV41 709 aa19.32■□□□□ 0.68
SSBP4-204ENST00000597724 CCSAPQ6IQ19 270 aaPredicted RBP19.32■□□□□ 0.68
SSBP4-204ENST00000597724 NOL8Q76FK4 1167 aaKnown RBP19.32■□□□□ 0.68
SSBP4-204ENST00000597724 SPC25Q9HBM1 224 aa19.32■□□□□ 0.68
SSBP4-204ENST00000597724 PXMP2Q9NR77 195 aa19.32■□□□□ 0.68
SSBP4-204ENST00000597724 CNTNAP5Q8WYK1 1306 aa19.31■□□□□ 0.68
SSBP4-204ENST00000597724 MYADML2A6NDP7 307 aa19.31■□□□□ 0.68
SSBP4-204ENST00000597724 H0YGN5 161 aa19.31■□□□□ 0.68
SSBP4-204ENST00000597724 CTAGE5O15320 804 aa19.31■□□□□ 0.68
SSBP4-204ENST00000597724 SEC24BO95487 1268 aa19.31■□□□□ 0.68
SSBP4-204ENST00000597724 C6orf222P0C671 652 aaPredicted RBP19.31■□□□□ 0.68
SSBP4-204ENST00000597724 EIF2AK2P19525 551 aaKnown RBP19.31■□□□□ 0.68
SSBP4-204ENST00000597724 METAP2P50579 478 aaKnown RBP eCLIP19.31■□□□□ 0.687e-7■■■□□ 17.5
SSBP4-204ENST00000597724 ANAPC15P60006 121 aa19.31■□□□□ 0.68
SSBP4-204ENST00000597724 TOB2Q14106 344 aaPredicted RBP19.31■□□□□ 0.68
SSBP4-204ENST00000597724 STXBP2Q15833 593 aa19.31■□□□□ 0.68
SSBP4-204ENST00000597724 KCNA10Q16322 511 aa19.31■□□□□ 0.68
SSBP4-204ENST00000597724 DUSP28Q4G0W2 176 aa19.31■□□□□ 0.68
SSBP4-204ENST00000597724 FERMT2Q96AC1 680 aa19.31■□□□□ 0.68
SSBP4-204ENST00000597724 WDR11Q9BZH6 1224 aa19.31■□□□□ 0.68
SSBP4-204ENST00000597724 UPF3BQ9BZI7 483 aaKnown RBP19.31■□□□□ 0.68
SSBP4-204ENST00000597724 Q9Y3F1 56 aa19.31■□□□□ 0.68
SSBP4-204ENST00000597724 CCDC196A0A1B0GTZ2 297 aa19.3■□□□□ 0.68
SSBP4-204ENST00000597724 NR3C2P08235 984 aa19.3■□□□□ 0.68
SSBP4-204ENST00000597724 ACLYP53396 1101 aa19.3■□□□□ 0.68
SSBP4-204ENST00000597724 ATN1P54259 1190 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-204ENST00000597724 GNASQ5JWF2 1037 aa19.3■□□□□ 0.68
SSBP4-204ENST00000597724 SLC39A5Q6ZMH5 540 aa19.3■□□□□ 0.68
SSBP4-204ENST00000597724 PCSK9Q8NBP7 692 aaKnown RBP19.3■□□□□ 0.68
SSBP4-204ENST00000597724 SCFD2Q8WU76 684 aa19.3■□□□□ 0.68
SSBP4-204ENST00000597724 PDCD2LQ9BRP1 358 aa19.3■□□□□ 0.68
SSBP4-204ENST00000597724 V9GY48 417 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-204ENST00000597724 NID2Q14112 1375 aa19.3■□□□□ 0.68
SSBP4-204ENST00000597724 A0A1W2PQ45 241 aaPredicted RBP19.29■□□□□ 0.68
SSBP4-204ENST00000597724 A0A1W2PQY0 241 aa19.29■□□□□ 0.68
SSBP4-204ENST00000597724 MOXD2PA6NHM9 499 aa19.29■□□□□ 0.68
SSBP4-204ENST00000597724 MEIS2O14770 477 aa19.29■□□□□ 0.68
SSBP4-204ENST00000597724 DYNC1LI2O43237 492 aaPredicted RBP19.29■□□□□ 0.68
SSBP4-204ENST00000597724 PTGS1P23219 599 aa19.29■□□□□ 0.68
SSBP4-204ENST00000597724 PDIA3P30101 505 aaKnown RBP19.29■□□□□ 0.68
SSBP4-204ENST00000597724 TLK2Q86UE8 772 aa19.29■□□□□ 0.68
SSBP4-204ENST00000597724 FCHSD1Q86WN1 690 aa19.29■□□□□ 0.68
SSBP4-204ENST00000597724 C7orf61Q8IZ16 206 aa19.29■□□□□ 0.68
SSBP4-204ENST00000597724 AP5M1Q9H0R1 490 aa19.29■□□□□ 0.68
SSBP4-204ENST00000597724 PIK3CDO00329 1044 aa19.28■□□□□ 0.68
SSBP4-204ENST00000597724 EIF3JO75822 258 aaKnown RBP19.28■□□□□ 0.68
SSBP4-204ENST00000597724 ASGR1P07306 291 aa19.28■□□□□ 0.68
SSBP4-204ENST00000597724 BEX3Q00994 111 aa19.28■□□□□ 0.68
SSBP4-204ENST00000597724 SNX17Q15036 470 aa19.28■□□□□ 0.68
SSBP4-204ENST00000597724 PGM5Q15124 567 aa19.28■□□□□ 0.68
SSBP4-204ENST00000597724 USP17L6PQ6QN14 398 aa19.28■□□□□ 0.68
SSBP4-204ENST00000597724 HEATR3Q7Z4Q2 680 aa19.28■□□□□ 0.68
SSBP4-204ENST00000597724 VSIG10LQ86VR7 867 aa19.28■□□□□ 0.68
SSBP4-204ENST00000597724 IL17RAQ96F46 866 aa19.28■□□□□ 0.68
SSBP4-204ENST00000597724 PSTPIP2Q9H939 334 aa19.28■□□□□ 0.68
SSBP4-204ENST00000597724 PDRG1Q9NUG6 133 aa19.28■□□□□ 0.68
SSBP4-204ENST00000597724 NKRFO15226 690 aaKnown RBP eCLIP19.27■□□□□ 0.682e-6■□□□□ 10.9
SSBP4-204ENST00000597724 TXNP10599 105 aaKnown RBP19.27■□□□□ 0.68
SSBP4-204ENST00000597724 FSCN1Q16658 493 aaKnown RBP19.27■□□□□ 0.68
SSBP4-204ENST00000597724 C1orf53Q5VUE5 145 aa19.27■□□□□ 0.68
SSBP4-204ENST00000597724 WWC2Q6AWC2 1192 aa19.27■□□□□ 0.68
SSBP4-204ENST00000597724 CCDC62Q6P9F0 684 aa19.27■□□□□ 0.68
SSBP4-204ENST00000597724 SEPT14Q6ZU15 432 aa19.27■□□□□ 0.68
SSBP4-204ENST00000597724 GPKOWQ92917 476 aaPredicted RBP eCLIP19.27■□□□□ 0.68
SSBP4-204ENST00000597724 CUL5Q93034 780 aa19.27■□□□□ 0.68
SSBP4-204ENST00000597724 KIAA1217Q5T5P2 1943 aa19.26■□□□□ 0.67
SSBP4-204ENST00000597724 hCG_1984214I3L0E3 225 aa19.26■□□□□ 0.67
SSBP4-204ENST00000597724 ARIH2O95376 493 aa19.26■□□□□ 0.67
SSBP4-204ENST00000597724 MYCLP12524 364 aaPredicted RBP19.26■□□□□ 0.67
SSBP4-204ENST00000597724 RTP1P59025 263 aa19.26■□□□□ 0.67
SSBP4-204ENST00000597724 TTLL4Q14679 1199 aa19.26■□□□□ 0.67
SSBP4-204ENST00000597724 NTRK3Q16288 839 aa19.26■□□□□ 0.67
SSBP4-204ENST00000597724 C8orf34Q49A92 452 aa19.26■□□□□ 0.67
SSBP4-204ENST00000597724 ZNF713Q8N859 430 aaPredicted RBP19.26■□□□□ 0.67
SSBP4-204ENST00000597724 IL31RAQ8NI17 732 aa19.26■□□□□ 0.67
SSBP4-204ENST00000597724 SMARCC2Q8TAQ2 1214 aa19.26■□□□□ 0.67
SSBP4-204ENST00000597724 ZNF274Q96GC6 653 aaPredicted RBP19.26■□□□□ 0.67
SSBP4-204ENST00000597724 ALDH8A1Q9H2A2 487 aaPredicted RBP19.26■□□□□ 0.67
SSBP4-204ENST00000597724 ELP1O95163 1332 aa19.25■□□□□ 0.67
SSBP4-204ENST00000597724 FRMPD4Q14CM0 1322 aa19.25■□□□□ 0.67
SSBP4-204ENST00000597724 RGS20O76081 388 aa19.25■□□□□ 0.67
SSBP4-204ENST00000597724 TYW1BQ6NUM6 668 aa19.25■□□□□ 0.67
SSBP4-204ENST00000597724 GLT1D1Q96MS3 346 aa19.25■□□□□ 0.67
SSBP4-204ENST00000597724 LARP6Q9BRS8 491 aaKnown RBP19.25■□□□□ 0.67
SSBP4-204ENST00000597724 NCOA5Q9HCD5 579 aaKnown RBP19.25■□□□□ 0.67
SSBP4-204ENST00000597724 STARD7Q9NQZ5 370 aa19.25■□□□□ 0.67
SSBP4-204ENST00000597724 BARHL2Q9NY43 387 aa19.25■□□□□ 0.67
SSBP4-204ENST00000597724 ATP11BQ9Y2G3 1177 aa19.25■□□□□ 0.67
SSBP4-204ENST00000597724 STXBP3O00186 592 aa19.24■□□□□ 0.67
SSBP4-204ENST00000597724 PRPF3O43395 683 aaKnown RBP19.24■□□□□ 0.67
SSBP4-204ENST00000597724 IFNAR1P17181 557 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms