RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 CCT8L2Q96SF2 557 aa17.21■□□□□ 0.35
IRF3-219ENST00000597636 DONSONQ9NYP3 566 aa17.21■□□□□ 0.35
IRF3-219ENST00000597636 FAM153AQ9UHL3 310 aa17.21■□□□□ 0.35
IRF3-219ENST00000597636 GGA2Q9UJY4 613 aa17.21■□□□□ 0.35
IRF3-219ENST00000597636 BCORQ6W2J9 1755 aa17.21■□□□□ 0.35
IRF3-219ENST00000597636 STARD3NLO95772 234 aa17.21■□□□□ 0.35
IRF3-219ENST00000597636 UBA7P41226 1012 aa17.21■□□□□ 0.35
IRF3-219ENST00000597636 SMTNP53814 917 aa17.21■□□□□ 0.35
IRF3-219ENST00000597636 ACTN3Q08043 901 aaPredicted RBP17.21■□□□□ 0.35
IRF3-219ENST00000597636 PAK2Q13177 524 aa17.21■□□□□ 0.35
IRF3-219ENST00000597636 PIK3R5Q8WYR1 880 aa17.21■□□□□ 0.35
IRF3-219ENST00000597636 TACO1Q9BSH4 297 aaKnown RBP17.21■□□□□ 0.35
IRF3-219ENST00000597636 VCPKMTQ9H867 229 aa17.21■□□□□ 0.35
IRF3-219ENST00000597636 SALL4Q9UJQ4 1053 aa17.21■□□□□ 0.35
IRF3-219ENST00000597636 THRAP3Q9Y2W1 955 aaKnown RBP17.21■□□□□ 0.35
IRF3-219ENST00000597636 AKR1B10O60218 316 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 MDH1P40925 334 aaKnown RBP17.2■□□□□ 0.34
IRF3-219ENST00000597636 MAGEA1P43355 309 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 PFKFB3Q16875 520 aaPredicted RBP17.2■□□□□ 0.34
IRF3-219ENST00000597636 CFAP221Q4G0U5 840 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 RNF187Q5TA31 235 aaPredicted RBP17.2■□□□□ 0.34
IRF3-219ENST00000597636 NLRP14Q86W24 1093 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 C1orf131Q8NDD1 294 aaKnown RBP17.2■□□□□ 0.34
IRF3-219ENST00000597636 MYCBPAPQ8TBZ2 947 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 PLIN2Q99541 437 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 BCL9O00512 1426 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 PJA2O43164 708 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 BCAMP50895 628 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 ADGRA1Q86SQ6 560 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 ZKSCAN4Q969J2 545 aaPredicted RBP17.2■□□□□ 0.34
IRF3-219ENST00000597636 MS4A14Q96JA4 679 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 EPB41L5Q9HCM4 733 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 RNF14Q9UBS8 474 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 CEP83Q9Y592 693 aa17.2■□□□□ 0.34
IRF3-219ENST00000597636 NKRFO15226 690 aaKnown RBP eCLIP17.19■□□□□ 0.34
IRF3-219ENST00000597636 SEC24CP53992 1094 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 PLCB4Q15147 1175 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 VPS72Q15906 364 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 IFT81Q8WYA0 676 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 ATP6V1G3Q96LB4 118 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 CCSER1Q9C0I3 900 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 CD248Q9HCU0 757 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 KLC4Q9NSK0 619 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 PAPPAQ13219 1627 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 SRRM3A6NNA2 597 aaPredicted RBP17.19■□□□□ 0.34
IRF3-219ENST00000597636 CALML3P27482 149 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 GUCY2DQ02846 1103 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 KLHDC7AQ5VTJ3 777 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 BLIDQ8IZY5 108 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 TSKSQ9UJT2 592 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 SIK3Q9Y2K2 1263 aa17.19■□□□□ 0.34
IRF3-219ENST00000597636 CYP2D7A0A087X1C5 515 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 MAGEB6P1A0A0J9YX57 407 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 ESYT3A0FGR9 886 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 EPHB6O15197 1021 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 HEXIM1O94992 359 aaKnown RBP17.18■□□□□ 0.34
IRF3-219ENST00000597636 FAM107AO95990 144 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 HDLBPQ00341 1268 aaKnown RBP17.18■□□□□ 0.34
IRF3-219ENST00000597636 STK4Q13043 487 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 CCDC40Q4G0X9 1142 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 ANKRD13CQ8N6S4 541 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 ZSCAN5CA6NGD5 496 aaPredicted RBP17.18■□□□□ 0.34
IRF3-219ENST00000597636 HMGB1P1B2RPK0 211 aaPredicted RBP17.18■□□□□ 0.34
IRF3-219ENST00000597636 RASSF9O75901 435 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 CYP19A1P11511 503 aaPredicted RBP17.18■□□□□ 0.34
IRF3-219ENST00000597636 RDXP35241 583 aaKnown RBP17.18■□□□□ 0.34
IRF3-219ENST00000597636 PDE4DQ08499 809 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 IFT88Q13099 833 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 CCDC13Q8IYE1 715 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 LRRC15Q8TF66 581 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 CCDC47Q96A33 483 aaKnown RBP17.18■□□□□ 0.34
IRF3-219ENST00000597636 MTMR8Q96EF0 704 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 NOX5Q96PH1 765 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 FAM207AQ9NSI2 230 aaPredicted RBP17.18■□□□□ 0.34
IRF3-219ENST00000597636 MYH10P35580 1976 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 ITGB4P16144 1822 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 FAM205AQ6ZU69 1335 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 LOC102724428A0A0B4J2F2 783 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 KIF1CO43896 1103 aaKnown RBP17.18■□□□□ 0.34
IRF3-219ENST00000597636 SIK1P57059 783 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 ITPK1Q13572 414 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 C6orf89Q6UWU4 347 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 RNF10Q8N5U6 811 aaKnown RBP17.18■□□□□ 0.34
IRF3-219ENST00000597636 TMEM60Q9H2L4 133 aa17.18■□□□□ 0.34
IRF3-219ENST00000597636 QTRT2Q9H974 415 aaKnown RBP17.18■□□□□ 0.34
IRF3-219ENST00000597636 FGRP09769 529 aa17.17■□□□□ 0.34
IRF3-219ENST00000597636 PPP1R2P41236 205 aa17.17■□□□□ 0.34
IRF3-219ENST00000597636 GUCY2FP51841 1108 aa17.17■□□□□ 0.34
IRF3-219ENST00000597636 ITGB3BPQ13352 177 aaPredicted RBP17.17■□□□□ 0.34
IRF3-219ENST00000597636 DRP2Q13474 957 aa17.17■□□□□ 0.34
IRF3-219ENST00000597636 BARGINQ6ZT62 677 aa17.17■□□□□ 0.34
IRF3-219ENST00000597636 CDCA7Q9BWT1 371 aaPredicted RBP17.17■□□□□ 0.34
IRF3-219ENST00000597636 VWA3BQ502W6 1294 aa17.17■□□□□ 0.34
IRF3-219ENST00000597636 PPP4R3AQ6IN85 833 aa17.17■□□□□ 0.34
IRF3-219ENST00000597636 WHAMMQ8TF30 809 aa17.17■□□□□ 0.34
IRF3-219ENST00000597636 GJD4Q96KN9 370 aaPredicted RBP17.17■□□□□ 0.34
IRF3-219ENST00000597636 CUEDC2Q9H467 287 aa17.17■□□□□ 0.34
IRF3-219ENST00000597636 SUFUQ9UMX1 484 aa17.17■□□□□ 0.34
IRF3-219ENST00000597636 BAZ2BQ9UIF8 2168 aaKnown RBP17.16■□□□□ 0.34
IRF3-219ENST00000597636 ARAP2Q8WZ64 1704 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms