RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 FBXO16Q8IX29 292 aaPredicted RBP20.86■□□□□ 0.93
IRF3-216ENST00000597180 UPF2Q9HAU5 1272 aaKnown RBP20.86■□□□□ 0.93
IRF3-216ENST00000597180 BARHL2Q9NY43 387 aa20.86■□□□□ 0.93
IRF3-216ENST00000597180 FRMPD4Q14CM0 1322 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 RBM47A0AV96 593 aaKnown RBP20.85■□□□□ 0.93
IRF3-216ENST00000597180 STXBP3O00186 592 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 MEIS2O14770 477 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 ADCY6O43306 1168 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 PFKFB2O60825 505 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 DUSP11O75319 330 aaKnown RBP20.85■□□□□ 0.93
IRF3-216ENST00000597180 SCG2P13521 617 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 STK3Q13188 491 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 PKN1Q16512 942 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 ARHGEF16Q5VV41 709 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 TYW1BQ6NUM6 668 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 EEPD1Q7L9B9 569 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 TEX2Q8IWB9 1127 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 ARRDC4Q8NCT1 418 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 CUL5Q93034 780 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 PHKBQ93100 1093 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 SLKQ9H2G2 1235 aaPredicted RBP20.85■□□□□ 0.93
IRF3-216ENST00000597180 PSTPIP2Q9H939 334 aa20.85■□□□□ 0.93
IRF3-216ENST00000597180 NAPAP54920 295 aa20.84■□□□□ 0.93
IRF3-216ENST00000597180 SCRN1Q12765 414 aa20.84■□□□□ 0.93
IRF3-216ENST00000597180 IQSEC1Q6DN90 963 aa20.84■□□□□ 0.93
IRF3-216ENST00000597180 USP17L6PQ6QN14 398 aa20.84■□□□□ 0.93
IRF3-216ENST00000597180 SMARCC2Q8TAQ2 1214 aa20.84■□□□□ 0.93
IRF3-216ENST00000597180 DIS3LQ8TF46 1054 aaKnown RBP20.84■□□□□ 0.93
IRF3-216ENST00000597180 LENG1Q96BZ8 264 aaPredicted RBP20.84■□□□□ 0.93
IRF3-216ENST00000597180 PDCD2LQ9BRP1 358 aa20.84■□□□□ 0.93
IRF3-216ENST00000597180 XPNPEP3Q9NQH7 507 aa20.84■□□□□ 0.93
IRF3-216ENST00000597180 PDGFCQ9NRA1 345 aa20.84■□□□□ 0.93
IRF3-216ENST00000597180 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.83■□□□□ 0.93
IRF3-216ENST00000597180 DNM1LO00429 736 aa20.83■□□□□ 0.93
IRF3-216ENST00000597180 CPLX1O14810 134 aa20.83■□□□□ 0.93
IRF3-216ENST00000597180 NR3C2P08235 984 aa20.83■□□□□ 0.93
IRF3-216ENST00000597180 EIF2AK2P19525 551 aaKnown RBP20.83■□□□□ 0.93
IRF3-216ENST00000597180 ADCYAP1R1P41586 468 aa20.83■□□□□ 0.93
IRF3-216ENST00000597180 AKAP17AQ02040 695 aaKnown RBP20.83■□□□□ 0.93
IRF3-216ENST00000597180 TNFAIP2Q03169 654 aa20.83■□□□□ 0.93
IRF3-216ENST00000597180 CPLX2Q6PUV4 134 aaKnown RBP20.83■□□□□ 0.93
IRF3-216ENST00000597180 FCHSD1Q86WN1 690 aa20.83■□□□□ 0.93
IRF3-216ENST00000597180 PAWRQ96IZ0 340 aaKnown RBP20.83■□□□□ 0.93
IRF3-216ENST00000597180 SLC26A6Q9BXS9 759 aa20.83■□□□□ 0.93
IRF3-216ENST00000597180 BACH2Q9BYV9 841 aa20.83■□□□□ 0.93
IRF3-216ENST00000597180 UPF3AQ9H1J1 476 aaKnown RBP20.83■□□□□ 0.93
IRF3-216ENST00000597180 GNEQ9Y223 722 aaKnown RBP20.83■□□□□ 0.93
IRF3-216ENST00000597180 MKI67P46013 3256 aaKnown RBP20.82■□□□□ 0.92
IRF3-216ENST00000597180 MYH7BA7E2Y1 1941 aa20.82■□□□□ 0.92
IRF3-216ENST00000597180 SYNRGQ9UMZ2 1314 aa20.82■□□□□ 0.92
IRF3-216ENST00000597180 ADAMTS4O75173 837 aa20.82■□□□□ 0.92
IRF3-216ENST00000597180 COL6A1P12109 1028 aa20.82■□□□□ 0.92
IRF3-216ENST00000597180 SMPD1P17405 629 aa20.82■□□□□ 0.92
IRF3-216ENST00000597180 PGM5Q15124 567 aa20.82■□□□□ 0.92
IRF3-216ENST00000597180 LRRC41Q15345 812 aa20.82■□□□□ 0.92
IRF3-216ENST00000597180 STXBP2Q15833 593 aa20.82■□□□□ 0.92
IRF3-216ENST00000597180 ME3Q16798 604 aa20.82■□□□□ 0.92
IRF3-216ENST00000597180 NECAB2Q7Z6G3 386 aa20.82■□□□□ 0.92
IRF3-216ENST00000597180 TRIM22Q8IYM9 498 aa20.82■□□□□ 0.92
IRF3-216ENST00000597180 TBC1D32Q96NH3 1257 aa20.82■□□□□ 0.92
IRF3-216ENST00000597180 RIC8AQ9NPQ8 531 aa20.82■□□□□ 0.92
IRF3-216ENST00000597180 PDE4DIPQ5VU43 2346 aa20.81■□□□□ 0.92
IRF3-216ENST00000597180 ESYT2A0FGR8 921 aa20.81■□□□□ 0.92
IRF3-216ENST00000597180 EIF3JO75822 258 aaKnown RBP20.81■□□□□ 0.92
IRF3-216ENST00000597180 LARGE1O95461 756 aa20.81■□□□□ 0.92
IRF3-216ENST00000597180 PGK1P00558 417 aa20.81■□□□□ 0.92
IRF3-216ENST00000597180 GJA9P57773 515 aa20.81■□□□□ 0.92
IRF3-216ENST00000597180 NKX3-2P78367 333 aa20.81■□□□□ 0.92
IRF3-216ENST00000597180 SSRP1Q08945 709 aaKnown RBP20.81■□□□□ 0.92
IRF3-216ENST00000597180 VSIG10LQ86VR7 867 aa20.81■□□□□ 0.92
IRF3-216ENST00000597180 IL31RAQ8NI17 732 aa20.81■□□□□ 0.92
IRF3-216ENST00000597180 SCFD2Q8WU76 684 aa20.81■□□□□ 0.92
IRF3-216ENST00000597180 GLT8D2Q9H1C3 349 aa20.81■□□□□ 0.92
IRF3-216ENST00000597180 C11orf49Q9H6J7 331 aa20.81■□□□□ 0.92
IRF3-216ENST00000597180 Q9Y3F1 56 aa20.81■□□□□ 0.92
IRF3-216ENST00000597180 TNRC18O15417 2968 aaPredicted RBP20.8■□□□□ 0.92
IRF3-216ENST00000597180 SMCO2A6NFE2 343 aa20.8■□□□□ 0.92
IRF3-216ENST00000597180 PPFIA3O75145 1194 aa20.8■□□□□ 0.92
IRF3-216ENST00000597180 CDKL5O76039 1030 aa20.8■□□□□ 0.92
IRF3-216ENST00000597180 CST5P28325 142 aaPredicted RBP20.8■□□□□ 0.92
IRF3-216ENST00000597180 ADCY7P51828 1080 aa20.8■□□□□ 0.92
IRF3-216ENST00000597180 RABEP1Q15276 862 aa20.8■□□□□ 0.92
IRF3-216ENST00000597180 UBE2SQ16763 222 aa20.8■□□□□ 0.92
IRF3-216ENST00000597180 DUSP28Q4G0W2 176 aa20.8■□□□□ 0.92
IRF3-216ENST00000597180 GJC2Q5T442 439 aaPredicted RBP20.8■□□□□ 0.92
IRF3-216ENST00000597180 NOL8Q76FK4 1167 aaKnown RBP20.8■□□□□ 0.92
IRF3-216ENST00000597180 RNF180Q86T96 592 aa20.8■□□□□ 0.92
IRF3-216ENST00000597180 KLHDC9Q8NEP7 349 aa20.8■□□□□ 0.92
IRF3-216ENST00000597180 IL27Q8NEV9 243 aa20.8■□□□□ 0.92
IRF3-216ENST00000597180 CCDC12Q8WUD4 166 aaPredicted RBP20.8■□□□□ 0.92
IRF3-216ENST00000597180 GTF3C6Q969F1 213 aa20.8■□□□□ 0.92
IRF3-216ENST00000597180 WDR11Q9BZH6 1224 aa20.8■□□□□ 0.92
IRF3-216ENST00000597180 ZMYND12Q9H0C1 365 aa20.8■□□□□ 0.92
IRF3-216ENST00000597180 STK36Q9NRP7 1315 aa20.79■□□□□ 0.92
IRF3-216ENST00000597180 KBTBD13C9JR72 458 aa20.79■□□□□ 0.92
IRF3-216ENST00000597180 DEXIO95424 95 aa20.79■□□□□ 0.92
IRF3-216ENST00000597180 CCND2P30279 289 aa20.79■□□□□ 0.92
IRF3-216ENST00000597180 TMEM63BQ5T3F8 832 aa20.79■□□□□ 0.92
IRF3-216ENST00000597180 LIMCH1Q9UPQ0 1083 aa20.79■□□□□ 0.92
IRF3-216ENST00000597180 NKRFO15226 690 aaKnown RBP eCLIP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms