RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 PTGISQ16647 500 aa18.41■□□□□ 0.54
LIG1-214ENST00000597146 LRRC8DQ7L1W4 858 aa18.41■□□□□ 0.54
LIG1-214ENST00000597146 AFAP1L1Q8TED9 768 aa18.41■□□□□ 0.54
LIG1-214ENST00000597146 DHX38Q92620 1227 aaKnown RBP18.41■□□□□ 0.54
LIG1-214ENST00000597146 SYNPO2Q9UMS6 1093 aa18.41■□□□□ 0.54
LIG1-214ENST00000597146 RALGAPA2Q2PPJ7 1873 aa18.4■□□□□ 0.54
LIG1-214ENST00000597146 RBM47A0AV96 593 aaKnown RBP18.4■□□□□ 0.54
LIG1-214ENST00000597146 C19orf67A6NJJ6 358 aa18.4■□□□□ 0.54
LIG1-214ENST00000597146 GSG1L2A8MUP6 293 aa18.4■□□□□ 0.54
LIG1-214ENST00000597146 SELPP16109 830 aa18.4■□□□□ 0.54
LIG1-214ENST00000597146 PTPN11Q06124 597 aaPredicted RBP18.4■□□□□ 0.54
LIG1-214ENST00000597146 FAM160B2Q86V87 743 aa18.4■□□□□ 0.54
LIG1-214ENST00000597146 CCDC155Q8N6L0 562 aa18.4■□□□□ 0.54
LIG1-214ENST00000597146 CAGE1Q8TC20 777 aa18.4■□□□□ 0.54
LIG1-214ENST00000597146 PANK1Q8TE04 598 aa18.4■□□□□ 0.54
LIG1-214ENST00000597146 STAG1Q8WVM7 1258 aa18.4■□□□□ 0.54
LIG1-214ENST00000597146 MRPL38Q96DV4 380 aaKnown RBP18.4■□□□□ 0.54
LIG1-214ENST00000597146 MFSD14AQ96MC6 490 aa18.4■□□□□ 0.54
LIG1-214ENST00000597146 MUTYHQ9UIF7 546 aa18.4■□□□□ 0.54
LIG1-214ENST00000597146 CCPG1Q9ULG6 757 aa18.4■□□□□ 0.54
LIG1-214ENST00000597146 PLIN4Q96Q06 1357 aa18.4■□□□□ 0.54
LIG1-214ENST00000597146 ST18O60284 1047 aa18.39■□□□□ 0.53
LIG1-214ENST00000597146 SLC1A4P43007 532 aa18.39■□□□□ 0.53
LIG1-214ENST00000597146 BAATQ14032 418 aaPredicted RBP18.39■□□□□ 0.53
LIG1-214ENST00000597146 PPP2R5BQ15173 497 aa18.39■□□□□ 0.53
LIG1-214ENST00000597146 BRDTQ58F21 947 aaPredicted RBP18.39■□□□□ 0.53
LIG1-214ENST00000597146 GDF6Q6KF10 455 aaPredicted RBP18.39■□□□□ 0.53
LIG1-214ENST00000597146 KCTD1Q719H9 257 aa18.39■□□□□ 0.53
LIG1-214ENST00000597146 ADHFE1Q8IWW8 467 aa18.39■□□□□ 0.53
LIG1-214ENST00000597146 ZNF444Q8N0Y2 327 aaPredicted RBP18.39■□□□□ 0.53
LIG1-214ENST00000597146 CHURC1Q8WUH1 139 aa18.39■□□□□ 0.53
LIG1-214ENST00000597146 STRBPQ96SI9 672 aaKnown RBP18.39■□□□□ 0.53
LIG1-214ENST00000597146 HAUS7Q99871 368 aa18.39■□□□□ 0.53
LIG1-214ENST00000597146 CHMP4BQ9H444 224 aaKnown RBP18.39■□□□□ 0.53
LIG1-214ENST00000597146 EPB41L4AQ9HCS5 686 aaPredicted RBP18.39■□□□□ 0.53
LIG1-214ENST00000597146 RAD50Q92878 1312 aa18.39■□□□□ 0.53
LIG1-214ENST00000597146 A6NJR5 290 aa18.38■□□□□ 0.53
LIG1-214ENST00000597146 CXCL10P02778 98 aa18.38■□□□□ 0.53
LIG1-214ENST00000597146 MCCP23508 829 aa18.38■□□□□ 0.53
LIG1-214ENST00000597146 TIGD5Q53EQ6 642 aa18.38■□□□□ 0.53
LIG1-214ENST00000597146 TCEAL5Q5H9L2 206 aa18.38■□□□□ 0.53
LIG1-214ENST00000597146 IER5LQ5T953 404 aa18.38■□□□□ 0.53
LIG1-214ENST00000597146 PABPC5Q96DU9 382 aaKnown RBP18.38■□□□□ 0.53
LIG1-214ENST00000597146 PRKAG3Q9UGI9 489 aa18.38■□□□□ 0.53
LIG1-214ENST00000597146 PRR12Q9ULL5 1215 aa18.38■□□□□ 0.53
LIG1-214ENST00000597146 CACNA1HO95180 2353 aa18.38■□□□□ 0.53
LIG1-214ENST00000597146 MYO15AQ9UKN7 3530 aa18.37■□□□□ 0.53
LIG1-214ENST00000597146 ABHD14A-ACY1A0A1B0GW23 586 aa18.37■□□□□ 0.53
LIG1-214ENST00000597146 NFIBO00712 420 aa18.37■□□□□ 0.53
LIG1-214ENST00000597146 HSP90AB4PQ58FF6 505 aa18.37■□□□□ 0.53
LIG1-214ENST00000597146 SLC30A10Q6XR72 485 aa18.37■□□□□ 0.53
LIG1-214ENST00000597146 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.37■□□□□ 0.53
LIG1-214ENST00000597146 BANK1Q8NDB2 785 aa18.37■□□□□ 0.53
LIG1-214ENST00000597146 KIF1BPQ96EK5 621 aa18.37■□□□□ 0.53
LIG1-214ENST00000597146 GMCL1Q96IK5 515 aa18.37■□□□□ 0.53
LIG1-214ENST00000597146 ADD3Q9UEY8 706 aaKnown RBP18.37■□□□□ 0.53
LIG1-214ENST00000597146 CKBP12277 381 aa18.36■□□□□ 0.53
LIG1-214ENST00000597146 ATP5JP18859 108 aa18.36■□□□□ 0.53
LIG1-214ENST00000597146 PTPN5P54829 565 aa18.36■□□□□ 0.53
LIG1-214ENST00000597146 CLUL1Q15846 466 aa18.36■□□□□ 0.53
LIG1-214ENST00000597146 PTPROQ16827 1216 aa18.36■□□□□ 0.53
LIG1-214ENST00000597146 KIAA1217Q5T5P2 1943 aa18.36■□□□□ 0.53
LIG1-214ENST00000597146 CLDND1Q9NY35 253 aa18.36■□□□□ 0.53
LIG1-214ENST00000597146 FAM50BQ9Y247 325 aa18.36■□□□□ 0.53
LIG1-214ENST00000597146 PLXNA3P51805 1871 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 PTPDC1A2A3K4 754 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 KPNA6O60684 536 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 ARIH2O95376 493 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 TSPY3P0CV98 308 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 TSPY8P0CW00 308 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 TDO2P48775 406 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 IKBKEQ14164 716 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 MBTPS1Q14703 1052 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 COL19A1Q14993 1142 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 EPC2Q52LR7 807 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 NEDD1Q8NHV4 660 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 UPF3BQ9BZI7 483 aaKnown RBP18.35■□□□□ 0.53
LIG1-214ENST00000597146 FAM86C1Q9NVL1 165 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 CTNNA3Q9UI47 895 aa18.35■□□□□ 0.53
LIG1-214ENST00000597146 NKRFO15226 690 aaKnown RBP eCLIP18.34■□□□□ 0.53
LIG1-214ENST00000597146 ICAM1P05362 532 aa18.34■□□□□ 0.53
LIG1-214ENST00000597146 CALML3P27482 149 aa18.34■□□□□ 0.53
LIG1-214ENST00000597146 RBL2Q08999 1139 aa18.34■□□□□ 0.53
LIG1-214ENST00000597146 TCF15Q12870 199 aa18.34■□□□□ 0.53
LIG1-214ENST00000597146 HERC4Q5GLZ8 1057 aaPredicted RBP18.34■□□□□ 0.53
LIG1-214ENST00000597146 ZSCAN25Q6NSZ9 544 aa18.34■□□□□ 0.53
LIG1-214ENST00000597146 GIMAP6Q6P9H5 292 aa18.34■□□□□ 0.53
LIG1-214ENST00000597146 TRAF7Q6Q0C0 670 aa18.34■□□□□ 0.53
LIG1-214ENST00000597146 SCFD2Q8WU76 684 aa18.34■□□□□ 0.53
LIG1-214ENST00000597146 WNT8BQ93098 351 aa18.34■□□□□ 0.53
LIG1-214ENST00000597146 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
LIG1-214ENST00000597146 DDX19BQ9UMR2 479 aa18.34■□□□□ 0.53
LIG1-214ENST00000597146 MTMR7Q9Y216 660 aa18.34■□□□□ 0.53
LIG1-214ENST00000597146 INSL6Q9Y581 213 aa18.34■□□□□ 0.53
LIG1-214ENST00000597146 COL4A6Q14031 1691 aa18.34■□□□□ 0.53
LIG1-214ENST00000597146 PLA2G6O60733 806 aa18.33■□□□□ 0.52
LIG1-214ENST00000597146 TXNP10599 105 aaKnown RBP18.33■□□□□ 0.52
LIG1-214ENST00000597146 LTBRP36941 435 aa18.33■□□□□ 0.52
LIG1-214ENST00000597146 HTRA4P83105 476 aaPredicted RBP18.33■□□□□ 0.52
LIG1-214ENST00000597146 PDE4DQ08499 809 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms