RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 USP17L19D6RCP7 530 aa9.51□□□□□ -0.89
LINC00343-204ENST00000596398 USP17L20D6RJB6 530 aa9.51□□□□□ -0.89
LINC00343-204ENST00000596398 FRAT2O75474 233 aaPredicted RBP9.51□□□□□ -0.89
LINC00343-204ENST00000596398 ZKSCAN1P17029 563 aaPredicted RBP9.51□□□□□ -0.89
LINC00343-204ENST00000596398 USP17L24Q0WX57 530 aa9.51□□□□□ -0.89
LINC00343-204ENST00000596398 PCSK7Q16549 785 aa9.51□□□□□ -0.89
LINC00343-204ENST00000596398 G2E3Q7L622 706 aa9.51□□□□□ -0.89
LINC00343-204ENST00000596398 ANKMY2Q8IV38 441 aa9.51□□□□□ -0.89
LINC00343-204ENST00000596398 TRIM43Q96BQ3 446 aaPredicted RBP9.51□□□□□ -0.89
LINC00343-204ENST00000596398 PPP1R12CQ9BZL4 782 aa9.51□□□□□ -0.89
LINC00343-204ENST00000596398 PRDM12Q9H4Q4 367 aa9.51□□□□□ -0.89
LINC00343-204ENST00000596398 DAGLAQ9Y4D2 1042 aa9.51□□□□□ -0.89
LINC00343-204ENST00000596398 FAM86C2PA6NEL3 165 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 FAM196BA6NMK8 535 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 ZNF853P0CG23 659 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 XRCC5P13010 732 aaKnown RBP9.5□□□□□ -0.89
LINC00343-204ENST00000596398 ITGB8P26012 769 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 GCLCP48506 637 aaPredicted RBP9.5□□□□□ -0.89
LINC00343-204ENST00000596398 UBE4AQ14139 1066 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 TAF7LQ5H9L4 462 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 EPHA10Q5JZY3 1008 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 CCDC30Q5VVM6 783 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 HHIPL2Q6UWX4 724 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 LMBR1LQ6UX01 489 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 KRT25Q7Z3Z0 450 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 FBXO33Q7Z6M2 555 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 VPS37DQ86XT2 251 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 TSPYL6Q8N831 410 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 TBC1D22AQ8WUA7 517 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 TP53INP1Q96A56 240 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 MRIQ9BWK5 157 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 PUS3Q9BZE2 481 aaKnown RBP9.5□□□□□ -0.89
LINC00343-204ENST00000596398 ASCC2Q9H1I8 757 aaPredicted RBP9.5□□□□□ -0.89
LINC00343-204ENST00000596398 FRRS1LQ9P0K9 344 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 ZFATQ9P243 1243 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 LOC285556D6RIA3 1793 aa9.5□□□□□ -0.89
LINC00343-204ENST00000596398 ARSDP51689 593 aa9.49□□□□□ -0.89
LINC00343-204ENST00000596398 TFF2Q03403 129 aa9.49□□□□□ -0.89
LINC00343-204ENST00000596398 TRIM60Q495X7 471 aa9.49□□□□□ -0.89
LINC00343-204ENST00000596398 TMEM31Q5JXX7 168 aa9.49□□□□□ -0.89
LINC00343-204ENST00000596398 DTWD1Q8N5C7 304 aa9.49□□□□□ -0.89
LINC00343-204ENST00000596398 USP6NLQ92738 828 aa9.49□□□□□ -0.89
LINC00343-204ENST00000596398 TIFAQ96CG3 184 aa9.49□□□□□ -0.89
LINC00343-204ENST00000596398 CALR3Q96L12 384 aaKnown RBP9.49□□□□□ -0.89
LINC00343-204ENST00000596398 LPIN3Q9BQK8 851 aa9.49□□□□□ -0.89
LINC00343-204ENST00000596398 SSBP4Q9BWG4 385 aaPredicted RBP9.49□□□□□ -0.89
LINC00343-204ENST00000596398 PDLIM7Q9NR12 457 aa9.49□□□□□ -0.89
LINC00343-204ENST00000596398 LRRFIP2Q9Y608 721 aaKnown RBP9.49□□□□□ -0.89
LINC00343-204ENST00000596398 TRIOO75962 3097 aa9.49□□□□□ -0.89
LINC00343-204ENST00000596398 PLXNA1Q9UIW2 1896 aa9.49□□□□□ -0.89
LINC00343-204ENST00000596398 ZBTB42B2RXF5 422 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 CNGA1P29973 690 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 MRE11P49959 708 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 KCNQ1P51787 676 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 HMGCS2P54868 508 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 SPP2Q13103 211 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 CCDC57Q2TAC2 916 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 PERM1Q5SV97 790 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 AKNAD1Q5T1N1 836 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 GJC2Q5T442 439 aaPredicted RBP9.48□□□□□ -0.89
LINC00343-204ENST00000596398 SLC39A5Q6ZMH5 540 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 DHX32Q7L7V1 743 aaKnown RBP9.48□□□□□ -0.89
LINC00343-204ENST00000596398 TXNRD2Q9NNW7 524 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 C11orf16Q9NQ32 467 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 USP40Q9NVE5 1235 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 MORF4L1Q9UBU8 362 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 MAST3O60307 1309 aa9.48□□□□□ -0.89
LINC00343-204ENST00000596398 C5orf42Q9H799 3197 aa9.47□□□□□ -0.89
LINC00343-204ENST00000596398 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.47□□□□□ -0.89
LINC00343-204ENST00000596398 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.47□□□□□ -0.89
LINC00343-204ENST00000596398 GRXCR1A8MXD5 290 aa9.47□□□□□ -0.89
LINC00343-204ENST00000596398 DNM1LO00429 736 aa9.47□□□□□ -0.89
LINC00343-204ENST00000596398 CTNND1O60716 968 aaKnown RBP9.47□□□□□ -0.89
LINC00343-204ENST00000596398 TARSP26639 723 aaKnown RBP9.47□□□□□ -0.89
LINC00343-204ENST00000596398 PLAURQ03405 335 aa9.47□□□□□ -0.89
LINC00343-204ENST00000596398 ELMSAN1Q6PJG2 1045 aa9.47□□□□□ -0.89
LINC00343-204ENST00000596398 FBXO11Q86XK2 927 aa9.47□□□□□ -0.89
LINC00343-204ENST00000596398 SOCS4Q8WXH5 440 aa9.47□□□□□ -0.89
LINC00343-204ENST00000596398 IFT43Q96FT9 208 aa9.47□□□□□ -0.89
LINC00343-204ENST00000596398 PORCNQ9H237 461 aa9.47□□□□□ -0.89
LINC00343-204ENST00000596398 MYH16Q9H6N6 1097 aa9.47□□□□□ -0.89
LINC00343-204ENST00000596398 VRTNQ9H8Y1 702 aa9.47□□□□□ -0.89
LINC00343-204ENST00000596398 FLRT1Q9NZU1 646 aa9.47□□□□□ -0.89
LINC00343-204ENST00000596398 DDX20Q9UHI6 824 aaKnown RBP9.47□□□□□ -0.89
LINC00343-204ENST00000596398 DDTLA6NHG4 134 aaPredicted RBP9.46□□□□□ -0.9
LINC00343-204ENST00000596398 SASH3O75995 380 aa9.46□□□□□ -0.9
LINC00343-204ENST00000596398 MICAL2O94851 1124 aa9.46□□□□□ -0.9
LINC00343-204ENST00000596398 RARAP10276 462 aa9.46□□□□□ -0.9
LINC00343-204ENST00000596398 RGS2P41220 211 aa9.46□□□□□ -0.9
LINC00343-204ENST00000596398 RGS3P49796 1198 aa9.46□□□□□ -0.9
LINC00343-204ENST00000596398 GPLD1P80108 840 aa9.46□□□□□ -0.9
LINC00343-204ENST00000596398 ANO1Q5XXA6 986 aa9.46□□□□□ -0.9
LINC00343-204ENST00000596398 WFDC8Q8IUA0 241 aa9.46□□□□□ -0.9
LINC00343-204ENST00000596398 ZSCAN29Q8IWY8 852 aaPredicted RBP9.46□□□□□ -0.9
LINC00343-204ENST00000596398 LPAR1Q92633 364 aa9.46□□□□□ -0.9
LINC00343-204ENST00000596398 FERMT2Q96AC1 680 aa9.46□□□□□ -0.9
LINC00343-204ENST00000596398 P2RX7Q99572 595 aaKnown RBP9.46□□□□□ -0.9
LINC00343-204ENST00000596398 KRTAP9-2Q9BYQ4 174 aa9.46□□□□□ -0.9
LINC00343-204ENST00000596398 ATAD5Q96QE3 1844 aa9.45□□□□□ -0.9
LINC00343-204ENST00000596398 MYH13Q9UKX3 1938 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms