RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 MYH6P13533 1939 aa21.03■□□□□ 0.96
ZNF558-204ENST00000596172 TNRC18O15417 2968 aaPredicted RBP21.02■□□□□ 0.96
ZNF558-204ENST00000596172 MEIS2O14770 477 aa21.02■□□□□ 0.96
ZNF558-204ENST00000596172 ADAMTS4O75173 837 aa21.02■□□□□ 0.96
ZNF558-204ENST00000596172 NR3C2P08235 984 aa21.02■□□□□ 0.96
ZNF558-204ENST00000596172 RBM25P49756 843 aaKnown RBP21.02■□□□□ 0.96
ZNF558-204ENST00000596172 CCT2P78371 535 aaKnown RBP21.02■□□□□ 0.96
ZNF558-204ENST00000596172 STXBP2Q15833 593 aa21.02■□□□□ 0.96
ZNF558-204ENST00000596172 PFKFB3Q16875 520 aaPredicted RBP21.02■□□□□ 0.96
ZNF558-204ENST00000596172 WWC2Q6AWC2 1192 aa21.02■□□□□ 0.96
ZNF558-204ENST00000596172 EEPD1Q7L9B9 569 aa21.02■□□□□ 0.96
ZNF558-204ENST00000596172 RNF180Q86T96 592 aa21.02■□□□□ 0.96
ZNF558-204ENST00000596172 CUL5Q93034 780 aa21.02■□□□□ 0.96
ZNF558-204ENST00000596172 HTATIP2Q9BUP3 242 aa21.02■□□□□ 0.96
ZNF558-204ENST00000596172 RNF26Q9BY78 433 aaPredicted RBP21.02■□□□□ 0.96
ZNF558-204ENST00000596172 C22orf23Q9BZE7 217 aa21.02■□□□□ 0.96
ZNF558-204ENST00000596172 UPF3AQ9H1J1 476 aaKnown RBP21.02■□□□□ 0.96
ZNF558-204ENST00000596172 C11orf49Q9H6J7 331 aa21.02■□□□□ 0.96
ZNF558-204ENST00000596172 PDGFCQ9NRA1 345 aa21.02■□□□□ 0.96
ZNF558-204ENST00000596172 BARHL2Q9NY43 387 aa21.02■□□□□ 0.96
ZNF558-204ENST00000596172 GNEQ9Y223 722 aaKnown RBP21.02■□□□□ 0.96
ZNF558-204ENST00000596172 ADCY6O43306 1168 aa21.01■□□□□ 0.95
ZNF558-204ENST00000596172 EIF3JO75822 258 aaKnown RBP21.01■□□□□ 0.95
ZNF558-204ENST00000596172 EIF2AK2P19525 551 aaKnown RBP21.01■□□□□ 0.95
ZNF558-204ENST00000596172 ADCYAP1R1P41586 468 aa21.01■□□□□ 0.95
ZNF558-204ENST00000596172 NEK4P51957 841 aa21.01■□□□□ 0.95
ZNF558-204ENST00000596172 AK2P54819 239 aa21.01■□□□□ 0.95
ZNF558-204ENST00000596172 GJA9P57773 515 aa21.01■□□□□ 0.95
ZNF558-204ENST00000596172 KLHDC9Q8NEP7 349 aa21.01■□□□□ 0.95
ZNF558-204ENST00000596172 GPKOWQ92917 476 aaPredicted RBP eCLIP21.01■□□□□ 0.95
ZNF558-204ENST00000596172 PDCD2LQ9BRP1 358 aa21.01■□□□□ 0.95
ZNF558-204ENST00000596172 LARP6Q9BRS8 491 aaKnown RBP21.01■□□□□ 0.95
ZNF558-204ENST00000596172 NCOA5Q9HCD5 579 aaKnown RBP21.01■□□□□ 0.95
ZNF558-204ENST00000596172 TPCN1Q9ULQ1 816 aa21.01■□□□□ 0.95
ZNF558-204ENST00000596172 FRMPD4Q14CM0 1322 aa21.01■□□□□ 0.95
ZNF558-204ENST00000596172 KBTBD13C9JR72 458 aa21■□□□□ 0.95
ZNF558-204ENST00000596172 STXBP3O00186 592 aa21■□□□□ 0.95
ZNF558-204ENST00000596172 PGK1P00558 417 aa21■□□□□ 0.95
ZNF558-204ENST00000596172 SCG2P13521 617 aa21■□□□□ 0.95
ZNF558-204ENST00000596172 SMPD1P17405 629 aa21■□□□□ 0.95
ZNF558-204ENST00000596172 CST5P28325 142 aaPredicted RBP21■□□□□ 0.95
ZNF558-204ENST00000596172 DUSP28Q4G0W2 176 aa21■□□□□ 0.95
ZNF558-204ENST00000596172 GJC2Q5T442 439 aaPredicted RBP21■□□□□ 0.95
ZNF558-204ENST00000596172 VSIG10LQ86VR7 867 aa21■□□□□ 0.95
ZNF558-204ENST00000596172 FCHSD1Q86WN1 690 aa21■□□□□ 0.95
ZNF558-204ENST00000596172 SCFD2Q8WU76 684 aa21■□□□□ 0.95
ZNF558-204ENST00000596172 TSEN34Q9BSV6 310 aaKnown RBP21■□□□□ 0.95
ZNF558-204ENST00000596172 WDR11Q9BZH6 1224 aa21■□□□□ 0.95
ZNF558-204ENST00000596172 GLT8D2Q9H1C3 349 aa21■□□□□ 0.95
ZNF558-204ENST00000596172 SPC25Q9HBM1 224 aa21■□□□□ 0.95
ZNF558-204ENST00000596172 SYNRGQ9UMZ2 1314 aa21■□□□□ 0.95
ZNF558-204ENST00000596172 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.99■□□□□ 0.95
ZNF558-204ENST00000596172 PFKFB2O60825 505 aa20.99■□□□□ 0.95
ZNF558-204ENST00000596172 AKAP17AQ02040 695 aaKnown RBP20.99■□□□□ 0.95
ZNF558-204ENST00000596172 PGM5Q15124 567 aa20.99■□□□□ 0.95
ZNF558-204ENST00000596172 PKN1Q16512 942 aa20.99■□□□□ 0.95
ZNF558-204ENST00000596172 TYW1BQ6NUM6 668 aa20.99■□□□□ 0.95
ZNF558-204ENST00000596172 CPLX2Q6PUV4 134 aaKnown RBP20.99■□□□□ 0.95
ZNF558-204ENST00000596172 USP17L6PQ6QN14 398 aa20.99■□□□□ 0.95
ZNF558-204ENST00000596172 IL27Q8NEV9 243 aa20.99■□□□□ 0.95
ZNF558-204ENST00000596172 SMARCC2Q8TAQ2 1214 aa20.99■□□□□ 0.95
ZNF558-204ENST00000596172 PHKBQ93100 1093 aa20.99■□□□□ 0.95
ZNF558-204ENST00000596172 LENG1Q96BZ8 264 aaPredicted RBP20.99■□□□□ 0.95
ZNF558-204ENST00000596172 KIF2CQ99661 725 aa20.99■□□□□ 0.95
ZNF558-204ENST00000596172 UPF2Q9HAU5 1272 aaKnown RBP20.99■□□□□ 0.95
ZNF558-204ENST00000596172 RIC8AQ9NPQ8 531 aa20.99■□□□□ 0.95
ZNF558-204ENST00000596172 MCM3APO60318 1980 aa20.98■□□□□ 0.95
ZNF558-204ENST00000596172 CPLX1O14810 134 aa20.98■□□□□ 0.95
ZNF558-204ENST00000596172 NKRFO15226 690 aaKnown RBP eCLIP20.98■□□□□ 0.95
ZNF558-204ENST00000596172 NAPAP54920 295 aa20.98■□□□□ 0.95
ZNF558-204ENST00000596172 CCSAPQ6IQ19 270 aaPredicted RBP20.98■□□□□ 0.95
ZNF558-204ENST00000596172 XRRA1Q6P2D8 792 aa20.98■□□□□ 0.95
ZNF558-204ENST00000596172 SLKQ9H2G2 1235 aaPredicted RBP20.98■□□□□ 0.95
ZNF558-204ENST00000596172 PHF24Q9UPV7 400 aa20.98■□□□□ 0.95
ZNF558-204ENST00000596172 ESYT2A0FGR8 921 aa20.97■□□□□ 0.95
ZNF558-204ENST00000596172 STAM2O75886 525 aa20.97■□□□□ 0.95
ZNF558-204ENST00000596172 CCND2P30279 289 aa20.97■□□□□ 0.95
ZNF558-204ENST00000596172 STK3Q13188 491 aa20.97■□□□□ 0.95
ZNF558-204ENST00000596172 TTLL4Q14679 1199 aa20.97■□□□□ 0.95
ZNF558-204ENST00000596172 CCDC62Q6P9F0 684 aa20.97■□□□□ 0.95
ZNF558-204ENST00000596172 NOL8Q76FK4 1167 aaKnown RBP20.97■□□□□ 0.95
ZNF558-204ENST00000596172 TRIM22Q8IYM9 498 aa20.97■□□□□ 0.95
ZNF558-204ENST00000596172 PCSK9Q8NBP7 692 aaKnown RBP20.97■□□□□ 0.95
ZNF558-204ENST00000596172 CCDC12Q8WUD4 166 aaPredicted RBP20.97■□□□□ 0.95
ZNF558-204ENST00000596172 SLC26A6Q9BXS9 759 aa20.97■□□□□ 0.95
ZNF558-204ENST00000596172 AP5M1Q9H0R1 490 aa20.97■□□□□ 0.95
ZNF558-204ENST00000596172 SMCO2A6NFE2 343 aa20.96■□□□□ 0.95
ZNF558-204ENST00000596172 MOXD2PA6NHM9 499 aa20.96■□□□□ 0.95
ZNF558-204ENST00000596172 CTAGE5O15320 804 aa20.96■□□□□ 0.95
ZNF558-204ENST00000596172 CDKL5O76039 1030 aa20.96■□□□□ 0.95
ZNF558-204ENST00000596172 ADCY7P51828 1080 aa20.96■□□□□ 0.95
ZNF558-204ENST00000596172 SSRP1Q08945 709 aaKnown RBP20.96■□□□□ 0.95
ZNF558-204ENST00000596172 SCRN1Q12765 414 aa20.96■□□□□ 0.95
ZNF558-204ENST00000596172 TLK2Q86UE8 772 aa20.96■□□□□ 0.95
ZNF558-204ENST00000596172 SENP6Q9GZR1 1112 aaPredicted RBP20.96■□□□□ 0.95
ZNF558-204ENST00000596172 LRRC37A2A6NM11 1700 aa20.95■□□□□ 0.94
ZNF558-204ENST00000596172 FRMPD3Q5JV73 1810 aa20.95■□□□□ 0.94
ZNF558-204ENST00000596172 DYNC1LI2O43237 492 aaPredicted RBP20.95■□□□□ 0.94
ZNF558-204ENST00000596172 FOSP01100 380 aaPredicted RBP20.95■□□□□ 0.94
ZNF558-204ENST00000596172 C6orf222P0C671 652 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms