RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 STXBP3O00186 592 aa17.08■□□□□ 0.33
ZNF541-205ENST00000595558 KRT86O43790 486 aa17.08■□□□□ 0.33
ZNF541-205ENST00000595558 IDEP14735 1019 aa17.08■□□□□ 0.33
ZNF541-205ENST00000595558 GGCXP38435 758 aa17.08■□□□□ 0.33
ZNF541-205ENST00000595558 GRM4Q14833 912 aa17.08■□□□□ 0.33
ZNF541-205ENST00000595558 CRY2Q49AN0 593 aa17.08■□□□□ 0.33
ZNF541-205ENST00000595558 ZFPM1Q8IX07 1006 aa17.08■□□□□ 0.33
ZNF541-205ENST00000595558 P2RX5Q93086 422 aa17.08■□□□□ 0.33
ZNF541-205ENST00000595558 KRT83P78385 493 aa17.08■□□□□ 0.32
ZNF541-205ENST00000595558 STIM1Q13586 685 aa17.08■□□□□ 0.32
ZNF541-205ENST00000595558 TRIM9Q9C026 710 aa17.08■□□□□ 0.32
ZNF541-205ENST00000595558 MLXIPQ9HAP2 919 aa17.08■□□□□ 0.32
ZNF541-205ENST00000595558 EHD2Q9NZN4 543 aa17.08■□□□□ 0.32
ZNF541-205ENST00000595558 CAPN6Q9Y6Q1 641 aa17.08■□□□□ 0.32
ZNF541-205ENST00000595558 AGPSO00116 658 aa17.07■□□□□ 0.32
ZNF541-205ENST00000595558 POLRMTO00411 1230 aaKnown RBP17.07■□□□□ 0.32
ZNF541-205ENST00000595558 MTIF2P46199 727 aaKnown RBP17.07■□□□□ 0.32
ZNF541-205ENST00000595558 CABP7Q86V35 215 aa17.07■□□□□ 0.32
ZNF541-205ENST00000595558 COG1Q8WTW3 980 aa17.07■□□□□ 0.32
ZNF541-205ENST00000595558 NOC4LQ9BVI4 516 aaKnown RBP17.07■□□□□ 0.32
ZNF541-205ENST00000595558 CCSER1Q9C0I3 900 aa17.07■□□□□ 0.32
ZNF541-205ENST00000595558 GPCPD1Q9NPB8 672 aa17.07■□□□□ 0.32
ZNF541-205ENST00000595558 RSPH14Q9UHP6 348 aa17.07■□□□□ 0.32
ZNF541-205ENST00000595558 DAGLAQ9Y4D2 1042 aa17.07■□□□□ 0.32
ZNF541-205ENST00000595558 GPR75-ASB3A0A0A6YYF3 556 aa17.07■□□□□ 0.32
ZNF541-205ENST00000595558 SLC16A2P36021 539 aa17.07■□□□□ 0.32
ZNF541-205ENST00000595558 TECP42680 631 aa17.07■□□□□ 0.32
ZNF541-205ENST00000595558 ASIC1P78348 528 aa17.07■□□□□ 0.32
ZNF541-205ENST00000595558 SLC39A2Q9NP94 309 aa17.07■□□□□ 0.32
ZNF541-205ENST00000595558 MED4Q9NPJ6 270 aa17.07■□□□□ 0.32
ZNF541-205ENST00000595558 PALM3A6NDB9 673 aaPredicted RBP17.06■□□□□ 0.32
ZNF541-205ENST00000595558 CCNT1O60563 726 aaKnown RBP17.06■□□□□ 0.32
ZNF541-205ENST00000595558 AKR1B1P15121 316 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 CCNE1P24864 410 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 CXCR5P32302 372 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 CYLC1P35663 651 aaPredicted RBP17.06■□□□□ 0.32
ZNF541-205ENST00000595558 NAPAP54920 295 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 PPP4CP60510 307 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 ZBED6P86452 979 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 KIAA0895Q8NCT3 520 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 SELENOOQ9BVL4 669 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 RASSF4Q9H2L5 321 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 SEMA6BQ9H3T3 888 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 SH3GLB2Q9NR46 395 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 EIF3CLB5ME19 914 aaKnown RBP17.06■□□□□ 0.32
ZNF541-205ENST00000595558 AARSP49588 968 aaKnown RBP eCLIP17.06■□□□□ 0.32
ZNF541-205ENST00000595558 TCP10Q12799 353 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 NFIAQ12857 509 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 TTBK2Q6IQ55 1244 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 DHTKD1Q96HY7 919 aaPredicted RBP17.06■□□□□ 0.32
ZNF541-205ENST00000595558 RBM17Q96I25 401 aaKnown RBP17.06■□□□□ 0.32
ZNF541-205ENST00000595558 EIF3CQ99613 913 aaKnown RBP17.06■□□□□ 0.32
ZNF541-205ENST00000595558 FAM207AQ9NSI2 230 aaPredicted RBP17.06■□□□□ 0.32
ZNF541-205ENST00000595558 BARHL2Q9NY43 387 aa17.06■□□□□ 0.32
ZNF541-205ENST00000595558 SMCO2A6NFE2 343 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 TUBBP07437 444 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 TAL1P17542 331 aaPredicted RBP17.05■□□□□ 0.32
ZNF541-205ENST00000595558 MATR3P43243 847 aaKnown RBP eCLIP17.05■□□□□ 0.32
ZNF541-205ENST00000595558 CCDC96Q2M329 555 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 FKBP15Q5T1M5 1219 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 CCNI2Q6ZMN8 369 aaPredicted RBP17.05■□□□□ 0.32
ZNF541-205ENST00000595558 RRP36Q96EU6 259 aaKnown RBP17.05■□□□□ 0.32
ZNF541-205ENST00000595558 PURBQ96QR8 312 aaKnown RBP17.05■□□□□ 0.32
ZNF541-205ENST00000595558 DBNDD1Q9H9R9 158 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 ZNHIT6Q9NWK9 470 aaKnown RBP17.05■□□□□ 0.32
ZNF541-205ENST00000595558 ARHGAP20Q9P2F6 1191 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 SBF2Q86WG5 1849 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 MOCS3O95396 460 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 IL1R1P14778 569 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 SLC7A5Q01650 507 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 SLC20A2Q08357 652 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 DPP8Q6V1X1 898 aaPredicted RBP17.05■□□□□ 0.32
ZNF541-205ENST00000595558 CREG2Q8IUH2 290 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 ANKRD13CQ8N6S4 541 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 AFAP1L1Q8TED9 768 aa17.05■□□□□ 0.32
ZNF541-205ENST00000595558 MMTAG2Q9BU76 263 aaKnown RBP17.05■□□□□ 0.32
ZNF541-205ENST00000595558 DMGDHQ9UI17 866 aaKnown RBP17.05■□□□□ 0.32
ZNF541-205ENST00000595558 SNED1Q8TER0 1413 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 GSTO1P78417 241 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 C2CD5Q86YS7 1000 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 AMOTL1Q8IY63 956 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 LRRC1Q9BTT6 524 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 VIPAS39Q9H9C1 493 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 RPS6KA5O75582 802 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 KIF5AQ12840 1032 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 C16orf86Q6ZW13 317 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 CCDC155Q8N6L0 562 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 SECISBP2LQ93073 1101 aaKnown RBP17.04■□□□□ 0.32
ZNF541-205ENST00000595558 CCDC42Q96M95 316 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 EHD4Q9H223 541 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 RABEP2Q9H5N1 569 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 SALL4Q9UJQ4 1053 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 COL24A1Q17RW2 1714 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 CCDC88AQ3V6T2 1871 aa17.04■□□□□ 0.32
ZNF541-205ENST00000595558 TAF1LQ8IZX4 1826 aa17.03■□□□□ 0.32
ZNF541-205ENST00000595558 NCK2O43639 380 aa17.03■□□□□ 0.32
ZNF541-205ENST00000595558 IPO7O95373 1038 aaKnown RBP17.03■□□□□ 0.32
ZNF541-205ENST00000595558 IVLP07476 585 aa17.03■□□□□ 0.32
ZNF541-205ENST00000595558 VAV2P52735 878 aa17.03■□□□□ 0.32
ZNF541-205ENST00000595558 NFRKBQ6P4R8 1299 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms