RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CALRP27797 417 aaKnown RBP17.2■□□□□ 0.34
PNKP-204ENST00000594661 RRP1BQ14684 758 aaKnown RBP17.2■□□□□ 0.34
PNKP-204ENST00000594661 MAP9Q49MG5 647 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 KCTD1Q719H9 257 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 TMC6Q7Z403 805 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 SIAH1Q8IUQ4 282 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 FAM177A1Q8N128 213 aaPredicted RBP17.2■□□□□ 0.34
PNKP-204ENST00000594661 SMCO2A6NFE2 343 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 CCDC96Q2M329 555 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 SPDYE2Q495Y8 402 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 AGBL3Q8NEM8 1001 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 CCDC12Q8WUD4 166 aaPredicted RBP17.2■□□□□ 0.34
PNKP-204ENST00000594661 FERMT2Q96AC1 680 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 EPSTI1Q96J88 318 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 SGIP1Q9BQI5 828 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 KANSL2Q9H9L4 492 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 JMJD4Q9H9V9 463 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 IFNKQ9P0W0 207 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 NYAP2Q9P242 653 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 CNTNAP1P78357 1384 aa17.19■□□□□ 0.34
PNKP-204ENST00000594661 LMOD1P29536 600 aaPredicted RBP17.19■□□□□ 0.34
PNKP-204ENST00000594661 SLC16A2P36021 539 aa17.19■□□□□ 0.34
PNKP-204ENST00000594661 ICA1Q05084 483 aa17.19■□□□□ 0.34
PNKP-204ENST00000594661 INF2Q27J81 1249 aa17.19■□□□□ 0.34
PNKP-204ENST00000594661 ABCB5Q2M3G0 1257 aa17.19■□□□□ 0.34
PNKP-204ENST00000594661 TMEM179Q6ZVK1 233 aa17.19■□□□□ 0.34
PNKP-204ENST00000594661 ADGRF4Q8IZF3 695 aa17.19■□□□□ 0.34
PNKP-204ENST00000594661 MKL1Q969V6 931 aa17.19■□□□□ 0.34
PNKP-204ENST00000594661 XPO4Q9C0E2 1151 aaKnown RBP17.19■□□□□ 0.34
PNKP-204ENST00000594661 RAB21Q9UL25 225 aa17.19■□□□□ 0.34
PNKP-204ENST00000594661 A0A087X0B3 334 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 VWA3AA6NCI4 1184 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 ACTN4O43707 911 aaKnown RBP17.18■□□□□ 0.34
PNKP-204ENST00000594661 MYL5Q02045 173 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 IL17AQ16552 155 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 GPATCH4Q5T3I0 446 aaKnown RBP17.18■□□□□ 0.34
PNKP-204ENST00000594661 SYMPKQ92797 1274 aaKnown RBP17.18■□□□□ 0.34
PNKP-204ENST00000594661 COA7Q96BR5 231 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 SHTN1A0MZ66 631 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 RAD21O60216 631 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 KANK3Q6NY19 840 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 GRAMD1CQ8IYS0 662 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 C4orf32Q8N8J7 132 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 FAM151AQ8WW52 585 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 VEZTQ9HBM0 779 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 C6orf50Q9HD87 102 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 MAN1B1Q9UKM7 699 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 L1RE1Q9UN81 338 aa17.18■□□□□ 0.34
PNKP-204ENST00000594661 POTEB2H3BUK9 544 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 ZSCAN12O43309 604 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 PPP1R11O60927 126 aaPredicted RBP17.17■□□□□ 0.34
PNKP-204ENST00000594661 N4BP1O75113 896 aaKnown RBP17.17■□□□□ 0.34
PNKP-204ENST00000594661 GH2P01242 217 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 CIAPIN1Q6FI81 312 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.17■□□□□ 0.34
PNKP-204ENST00000594661 CDAN1Q8IWY9 1227 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 DHX58Q96C10 678 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 UTRNP46939 3433 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 USP17L10C9JJH3 530 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 hCG_1984214I3L0E3 225 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 BMP6P22004 513 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 GNA11P29992 359 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 PPP2R5AQ15172 486 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 ZNF713Q8N859 430 aaPredicted RBP17.17■□□□□ 0.34
PNKP-204ENST00000594661 MTMR14Q8NCE2 650 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 JDP2Q8WYK2 163 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 HSD3B7Q9H2F3 369 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.17■□□□□ 0.34
PNKP-204ENST00000594661 BCS1LQ9Y276 419 aa17.17■□□□□ 0.34
PNKP-204ENST00000594661 ESYT2A0FGR8 921 aa17.16■□□□□ 0.34
PNKP-204ENST00000594661 ATP1A3P13637 1013 aa17.16■□□□□ 0.34
PNKP-204ENST00000594661 FANCCQ00597 558 aa17.16■□□□□ 0.34
PNKP-204ENST00000594661 MCM6Q14566 821 aa17.16■□□□□ 0.34
PNKP-204ENST00000594661 RBM26Q5T8P6 1007 aaKnown RBP17.16■□□□□ 0.34
PNKP-204ENST00000594661 NT5DC1Q5TFE4 455 aa17.16■□□□□ 0.34
PNKP-204ENST00000594661 SLFN13Q68D06 897 aa17.16■□□□□ 0.34
PNKP-204ENST00000594661 MSANTD4Q8NCY6 345 aa17.16■□□□□ 0.34
PNKP-204ENST00000594661 ZBED3Q96IU2 234 aaPredicted RBP17.16■□□□□ 0.34
PNKP-204ENST00000594661 HERC5Q9UII4 1024 aaKnown RBP17.16■□□□□ 0.34
PNKP-204ENST00000594661 ARFGEF1Q9Y6D6 1849 aa17.16■□□□□ 0.34
PNKP-204ENST00000594661 PNMA6FA0A0J9YX94 578 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 GOLGA6L9A6NEM1 432 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 ERLIN1O75477 346 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 SLC1A4P43007 532 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 KRT25Q7Z3Z0 450 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 DCAF4Q8WV16 495 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 MIEF2Q96C03 454 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 TMEM39BQ9GZU3 492 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 TMEM60Q9H2L4 133 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 TMEM260Q9NX78 707 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 BIN2Q9UBW5 565 aaPredicted RBP17.15■□□□□ 0.34
PNKP-204ENST00000594661 CD2APQ9Y5K6 639 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 IRF6O14896 467 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 SARSP49591 514 aaKnown RBP17.15■□□□□ 0.34
PNKP-204ENST00000594661 NBPF9Q3BBW0 867 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 REXO1Q8N1G1 1221 aaKnown RBP17.15■□□□□ 0.34
PNKP-204ENST00000594661 MTMR8Q96EF0 704 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 FAXDC2Q96IV6 333 aa17.15■□□□□ 0.34
PNKP-204ENST00000594661 WNT10BO00744 389 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 PTGER2P43116 358 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms