RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 SMCO2A6NFE2 343 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 B4DLN1 442 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 M0R2N6 131 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 SEPT4O43236 478 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 GJB1P08034 283 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 CCL5P13501 91 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
XRCC1-204ENST00000594511 CALML3P27482 149 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 NAPAP54920 295 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 LHX8Q68G74 356 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 MCTP2Q6DN12 878 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 GALNT17Q6IS24 598 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 TAPT1Q6NXT6 567 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 XRRA1Q6P2D8 792 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 USP17L6PQ6QN14 398 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 VSIG10LQ86VR7 867 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 DAGLBQ8NCG7 672 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 CRYGNQ8WXF5 182 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 CUL5Q93034 780 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 RMDN3Q96TC7 470 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 PDCD2LQ9BRP1 358 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 UNC93B1Q9H1C4 597 aa12.89□□□□□ -0.35
XRCC1-204ENST00000594511 HMX1Q9NP08 348 aaPredicted RBP12.89□□□□□ -0.35
XRCC1-204ENST00000594511 ORC3Q9UBD5 711 aaPredicted RBP12.89□□□□□ -0.35
XRCC1-204ENST00000594511 CENPFP49454 3210 aa12.88□□□□□ -0.35
XRCC1-204ENST00000594511 FOSP01100 380 aaPredicted RBP12.88□□□□□ -0.35
XRCC1-204ENST00000594511 NR3C2P08235 984 aa12.88□□□□□ -0.35
XRCC1-204ENST00000594511 GNA11P29992 359 aa12.88□□□□□ -0.35
XRCC1-204ENST00000594511 HOXA13P31271 388 aaPredicted RBP12.88□□□□□ -0.35
XRCC1-204ENST00000594511 ACVR2BQ13705 512 aa12.88□□□□□ -0.35
XRCC1-204ENST00000594511 NOL8Q76FK4 1167 aaKnown RBP12.88□□□□□ -0.35
XRCC1-204ENST00000594511 CCDC148Q8NFR7 591 aa12.88□□□□□ -0.35
XRCC1-204ENST00000594511 WASF1Q92558 559 aa12.88□□□□□ -0.35
XRCC1-204ENST00000594511 PHF20Q9BVI0 1012 aa12.88□□□□□ -0.35
XRCC1-204ENST00000594511 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.88□□□□□ -0.35
XRCC1-204ENST00000594511 VTA1Q9NP79 307 aa12.88□□□□□ -0.35
XRCC1-204ENST00000594511 ADAMTS3O15072 1205 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 MSCO60682 206 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 EIF3JO75822 258 aaKnown RBP12.87□□□□□ -0.35
XRCC1-204ENST00000594511 STAM2O75886 525 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 SGPL1O95470 568 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 CCND3P30281 292 aaPredicted RBP12.87□□□□□ -0.35
XRCC1-204ENST00000594511 GJA8P48165 433 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 ADCY7P51828 1080 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 HMGN5P82970 282 aaKnown RBP12.87□□□□□ -0.35
XRCC1-204ENST00000594511 AP3B2Q13367 1082 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 PGM5Q15124 567 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 PRAMEF19Q5SWL8 479 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 IQSEC1Q6DN90 963 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 CCDC83Q8IWF9 413 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 AIFM3Q96NN9 605 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 C6orf50Q9HD87 102 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 VPS54Q9P1Q0 977 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 BIN2Q9UBW5 565 aaPredicted RBP12.87□□□□□ -0.35
XRCC1-204ENST00000594511 CNPY2Q9Y2B0 182 aa12.87□□□□□ -0.35
XRCC1-204ENST00000594511 KIAA1217Q5T5P2 1943 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 EDIL3O43854 480 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 JAK2O60674 1132 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 PPFIA3O75145 1194 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 RGS20O76081 388 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 MRPS9P82933 396 aaKnown RBP12.86□□□□□ -0.35
XRCC1-204ENST00000594511 STXBP2Q15833 593 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 ARHGEF16Q5VV41 709 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 PCNX4Q63HM2 1172 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 CCDC62Q6P9F0 684 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 BICD2Q8TD16 824 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 MPHOSPH6Q99547 160 aaKnown RBP12.86□□□□□ -0.35
XRCC1-204ENST00000594511 RNF208Q9H0X6 261 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
XRCC1-204ENST00000594511 OGDHLQ9ULD0 1010 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 PCDHA6Q9UN73 950 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 PCDHA4Q9UN74 947 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 Q9Y3F1 56 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 PCDHA8Q9Y5H6 950 aa12.86□□□□□ -0.35
XRCC1-204ENST00000594511 DUSP11O75319 330 aaKnown RBP12.85□□□□□ -0.35
XRCC1-204ENST00000594511 CYP3A4P08684 503 aa12.85□□□□□ -0.35
XRCC1-204ENST00000594511 TGFB3P10600 412 aa12.85□□□□□ -0.35
XRCC1-204ENST00000594511 AKR1A1P14550 325 aa12.85□□□□□ -0.35
XRCC1-204ENST00000594511 ICAM3P32942 547 aa12.85□□□□□ -0.35
XRCC1-204ENST00000594511 SREBF1P36956 1147 aa12.85□□□□□ -0.35
XRCC1-204ENST00000594511 PDE4DQ08499 809 aa12.85□□□□□ -0.35
XRCC1-204ENST00000594511 UBE2SQ16763 222 aa12.85□□□□□ -0.35
XRCC1-204ENST00000594511 UBE2Q1Q7Z7E8 422 aa12.85□□□□□ -0.35
XRCC1-204ENST00000594511 IL31RAQ8NI17 732 aa12.85□□□□□ -0.35
XRCC1-204ENST00000594511 INTS4Q96HW7 963 aaKnown RBP12.85□□□□□ -0.35
XRCC1-204ENST00000594511 INPP4AQ96PE3 977 aaPredicted RBP12.85□□□□□ -0.35
XRCC1-204ENST00000594511 ALG1Q9BT22 464 aa12.85□□□□□ -0.35
XRCC1-204ENST00000594511 UPF3AQ9H1J1 476 aaKnown RBP12.85□□□□□ -0.35
XRCC1-204ENST00000594511 FAM184BQ9ULE4 1060 aa12.85□□□□□ -0.35
XRCC1-204ENST00000594511 GNEQ9Y223 722 aaKnown RBP12.85□□□□□ -0.35
XRCC1-204ENST00000594511 DDX49Q9Y6V7 483 aaKnown RBP12.85□□□□□ -0.35
XRCC1-204ENST00000594511 KIAA0100Q14667 2235 aaKnown RBP12.85□□□□□ -0.35
XRCC1-204ENST00000594511 FRMPD3Q5JV73 1810 aa12.84□□□□□ -0.35
XRCC1-204ENST00000594511 POTEFA5A3E0 1075 aa12.84□□□□□ -0.35
XRCC1-204ENST00000594511 ADCY6O43306 1168 aa12.84□□□□□ -0.35
XRCC1-204ENST00000594511 XBP1P17861 261 aa12.84□□□□□ -0.35
XRCC1-204ENST00000594511 EIF2AK2P19525 551 aaKnown RBP12.84□□□□□ -0.35
XRCC1-204ENST00000594511 MNX1P50219 401 aaPredicted RBP12.84□□□□□ -0.35
XRCC1-204ENST00000594511 CCDC144BQ3MJ40 725 aa12.84□□□□□ -0.35
XRCC1-204ENST00000594511 DUSP28Q4G0W2 176 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms