RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 SLC35G1Q2M3R5 365 aa12.52□□□□□ -0.41
USE1-203ENST00000593597 NBPF20Q3BBV1 942 aa12.52□□□□□ -0.41
USE1-203ENST00000593597 CCDC62Q6P9F0 684 aa12.52□□□□□ -0.41
USE1-203ENST00000593597 CHD1LQ86WJ1 897 aa12.52□□□□□ -0.41
USE1-203ENST00000593597 B4E1Z4 1266 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 PCP11498 1178 aaKnown RBP12.51□□□□□ -0.41
USE1-203ENST00000593597 PDE4DQ08499 809 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 GPNMBQ14956 572 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 PPP2R5BQ15173 497 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 CWC27Q6UX04 472 aaKnown RBP12.51□□□□□ -0.41
USE1-203ENST00000593597 DGKHQ86XP1 1220 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 ADGRF4Q8IZF3 695 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 ENAHQ8N8S7 591 aaPredicted RBP12.51□□□□□ -0.41
USE1-203ENST00000593597 PNMA1Q8ND90 353 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 DNERQ8NFT8 737 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 EXOC6Q8TAG9 804 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 SYTL5Q8TDW5 730 aaPredicted RBP12.51□□□□□ -0.41
USE1-203ENST00000593597 PPM1EQ8WY54 764 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 ANKS1AQ92625 1134 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 ESR2Q92731 530 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 TAAR1Q96RJ0 339 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 MTG1Q9BT17 334 aaPredicted RBP12.51□□□□□ -0.41
USE1-203ENST00000593597 SEZ6LQ9BYH1 1024 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 POLR3EQ9NVU0 708 aa12.51□□□□□ -0.41
USE1-203ENST00000593597 ZBTB47Q9UFB7 747 aaPredicted RBP12.51□□□□□ -0.41
USE1-203ENST00000593597 EPOPA6NHQ4 379 aa12.5□□□□□ -0.41
USE1-203ENST00000593597 PPP1R11O60927 126 aaPredicted RBP12.5□□□□□ -0.41
USE1-203ENST00000593597 TXNP10599 105 aaKnown RBP12.5□□□□□ -0.41
USE1-203ENST00000593597 CPT1AP50416 773 aa12.5□□□□□ -0.41
USE1-203ENST00000593597 ARHGAP1Q07960 439 aa12.5□□□□□ -0.41
USE1-203ENST00000593597 RAB30Q15771 203 aa12.5□□□□□ -0.41
USE1-203ENST00000593597 LY6KQ17RY6 165 aa12.5□□□□□ -0.41
USE1-203ENST00000593597 TCTN1Q2MV58 587 aa12.5□□□□□ -0.41
USE1-203ENST00000593597 QRICH1Q2TAL8 776 aa12.5□□□□□ -0.41
USE1-203ENST00000593597 GPATCH4Q5T3I0 446 aaKnown RBP12.5□□□□□ -0.41
USE1-203ENST00000593597 SPRED2Q7Z698 418 aa12.5□□□□□ -0.41
USE1-203ENST00000593597 DEFB128Q7Z7B8 93 aa12.5□□□□□ -0.41
USE1-203ENST00000593597 RGS22Q8NE09 1264 aa12.5□□□□□ -0.41
USE1-203ENST00000593597 SCFD2Q8WU76 684 aa12.5□□□□□ -0.41
USE1-203ENST00000593597 DHX38Q92620 1227 aaKnown RBP12.5□□□□□ -0.41
USE1-203ENST00000593597 KAT2BQ92831 832 aa12.5□□□□□ -0.41
USE1-203ENST00000593597 GAS2L1Q99501 681 aaPredicted RBP12.5□□□□□ -0.41
USE1-203ENST00000593597 ZSWIM5Q9P217 1185 aa12.5□□□□□ -0.41
USE1-203ENST00000593597 MICAL3Q7RTP6 2002 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 SIP14410 1827 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 ABCB11O95342 1321 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 RFXAPO00287 272 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 ZNF213O14771 459 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 NKRFO15226 690 aaKnown RBP eCLIP12.49□□□□□ -0.41
USE1-203ENST00000593597 MMP3P08254 477 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 PDE4AP27815 886 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 SEC23AQ15436 765 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 CCDC85BQ15834 202 aaPredicted RBP12.49□□□□□ -0.41
USE1-203ENST00000593597 TJAP1Q5JTD0 557 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 STAG2Q8N3U4 1231 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 AFG1LQ8WV93 481 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 ZSCAN10Q96SZ4 725 aaPredicted RBP12.49□□□□□ -0.41
USE1-203ENST00000593597 RNF41Q9H4P4 317 aaPredicted RBP12.49□□□□□ -0.41
USE1-203ENST00000593597 JMJD4Q9H9V9 463 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 MSRAQ9UJ68 235 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 TAF6LQ9Y6J9 622 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 SLC4A7Q9Y6M7 1214 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 BRWD1Q9NSI6 2320 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 ATG2AQ2TAZ0 1938 aa12.49□□□□□ -0.41
USE1-203ENST00000593597 ZBBXA8MT70 800 aa12.48□□□□□ -0.41
USE1-203ENST00000593597 RGS20O76081 388 aa12.48□□□□□ -0.41
USE1-203ENST00000593597 IQCF3P0C7M6 154 aa12.48□□□□□ -0.41
USE1-203ENST00000593597 GSPT1P15170 499 aaKnown RBP12.48□□□□□ -0.41
USE1-203ENST00000593597 ATP2A2P16615 1042 aaKnown RBP12.48□□□□□ -0.41
USE1-203ENST00000593597 HIC1Q14526 733 aa12.48□□□□□ -0.41
USE1-203ENST00000593597 FAM47CQ5HY64 1035 aa12.48□□□□□ -0.41
USE1-203ENST00000593597 GDF6Q6KF10 455 aaPredicted RBP12.48□□□□□ -0.41
USE1-203ENST00000593597 NFRKBQ6P4R8 1299 aa12.48□□□□□ -0.41
USE1-203ENST00000593597 CYB5R4Q7L1T6 521 aa12.48□□□□□ -0.41
USE1-203ENST00000593597 WNT8BQ93098 351 aa12.48□□□□□ -0.41
USE1-203ENST00000593597 DSCC1Q9BVC3 393 aa12.48□□□□□ -0.41
USE1-203ENST00000593597 SLC28A3Q9HAS3 691 aa12.48□□□□□ -0.41
USE1-203ENST00000593597 PCDHA11Q9Y5I1 949 aa12.48□□□□□ -0.41
USE1-203ENST00000593597 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 CA3P07451 260 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 SUPT20HL2P0C7V6 817 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 EIF2AK2P19525 551 aaKnown RBP12.47□□□□□ -0.41
USE1-203ENST00000593597 IGFBP4P22692 258 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 GHRHRQ02643 423 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 ASPRV1Q53RT3 343 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 PPP2R2DQ66LE6 453 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 KRT40Q6A162 431 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 TRAF7Q6Q0C0 670 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 SEPT14Q6ZU15 432 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 TMCO2Q7Z6W1 182 aaPredicted RBP12.47□□□□□ -0.41
USE1-203ENST00000593597 RPUSD2Q8IZ73 545 aaKnown RBP12.47□□□□□ -0.41
USE1-203ENST00000593597 IL31RAQ8NI17 732 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 MTMR8Q96EF0 704 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 MTIF3Q9H2K0 278 aaKnown RBP12.47□□□□□ -0.41
USE1-203ENST00000593597 RWDD1Q9H446 243 aaPredicted RBP12.47□□□□□ -0.41
USE1-203ENST00000593597 KAT14Q9H8E8 782 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 SENP2Q9HC62 589 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 DIAPH3Q9NSV4 1193 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 THEGQ9P2T0 379 aa12.47□□□□□ -0.41
USE1-203ENST00000593597 PNMA2Q9UL42 364 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms