RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 CCDC102AQ96A19 550 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 NAP1L4Q99733 375 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 BTBD7Q9P203 1132 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 PNMA3Q9UL41 463 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 FRMPD4Q14CM0 1322 aa13.12□□□□□ -0.31
CACNA1A-213ENST00000593267 GOLGA6L4A6NEF3 574 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 LAD1O00515 517 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 CCNT1O60563 726 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 CUTAO60888 179 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 SLC10A3P09131 477 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 GCFC2P16383 781 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 PRPHP41219 470 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 USP11P51784 963 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 PTGDRQ13258 359 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 ARL6IP4Q66PJ3 421 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 PPP4R3AQ6IN85 833 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 FERMT2Q96AC1 680 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 MBOAT7Q96N66 472 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 HOMER2Q9NSB8 354 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 RABGAP1Q9Y3P9 1069 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 SRPRBQ9Y5M8 271 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 MRVI1Q9Y6F6 885 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 RPTORQ8N122 1335 aa13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 TNRC18O15417 2968 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-213ENST00000593267 CYP3A7-CYP3A51PA0A087WV96 503 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 PDHXO00330 501 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 NEMFO60524 1076 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 TDP2O95551 362 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 CYP3A4P08684 503 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 CYP3A7P24462 503 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 ARHGAP4P98171 946 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 CHST13Q8NET6 341 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 MRPS27Q92552 414 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 SPATC1LQ9H0A9 340 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 TMEM60Q9H2L4 133 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 GOLPH3LQ9H4A5 285 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 ACAD9Q9H845 621 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 EHMT1Q9H9B1 1298 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 SAGE1Q9NXZ1 904 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 COL20A1Q9P218 1284 aa13.1□□□□□ -0.31
CACNA1A-213ENST00000593267 FAM237AA0A1B0GTK4 181 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 MANSC4A6NHS7 340 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 LRRC37A2A6NM11 1700 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 FAM155AB1AL88 458 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 SLC37A4O43826 429 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 TRPA1O75762 1119 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 OR52Z1P0C646 297 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 LIG1P18858 919 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 CMA1P23946 247 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 CIITAP33076 1130 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 COPB2P35606 906 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 RPS6P62753 249 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 PLS1Q14651 629 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 RESP18Q5W5W9 173 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 SHC4Q6S5L8 630 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 SLC30A10Q6XR72 485 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 RNF207Q6ZRF8 634 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 FCHSD1Q86WN1 690 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 CCAR1Q8IX12 1150 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 SYTL5Q8TDW5 730 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 PTPN18Q99952 460 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 TXNRD2Q9NNW7 524 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 ZCCHC17Q9NP64 241 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 RBPJLQ9UBG7 517 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 FBXO40Q9UH90 709 aa13.09□□□□□ -0.31
CACNA1A-213ENST00000593267 SLC25A27O95847 323 aa13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 CYP2C8P10632 490 aa13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 GRIN1Q05586 938 aa13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 IL17AQ16552 155 aa13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 Q4G0T1 1027 aa13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 NSMFQ6X4W1 530 aa13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 POTEDQ86YR6 584 aa13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 FSIP1Q8NA03 581 aa13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 ENGASEQ8NFI3 743 aa13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 CLIC6Q96NY7 704 aa13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 MTMR9Q96QG7 549 aa13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 PAGR1Q9BTK6 254 aa13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 MOV10L1Q9BXT6 1211 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 A1CFQ9NQ94 594 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 DDX25Q9UHL0 483 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 HPSEQ9Y251 543 aa13.08□□□□□ -0.32
CACNA1A-213ENST00000593267 PLXNB2O15031 1838 aa13.07□□□□□ -0.32
CACNA1A-213ENST00000593267 PEX10O60683 326 aa13.07□□□□□ -0.32
CACNA1A-213ENST00000593267 GCLCP48506 637 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-213ENST00000593267 ERVK-9P63128 1117 aa13.07□□□□□ -0.32
CACNA1A-213ENST00000593267 ERVK-24P63145 666 aa13.07□□□□□ -0.32
CACNA1A-213ENST00000593267 FAM160A1Q05DH4 1040 aa13.07□□□□□ -0.32
CACNA1A-213ENST00000593267 SNW1Q13573 536 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-213ENST00000593267 BAATQ14032 418 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-213ENST00000593267 CALCRLQ16602 461 aa13.07□□□□□ -0.32
CACNA1A-213ENST00000593267 TPRNQ4KMQ1 711 aa13.07□□□□□ -0.32
CACNA1A-213ENST00000593267 CAVIN1Q6NZI2 390 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-213ENST00000593267 CCDC73Q6ZRK6 1079 aa13.07□□□□□ -0.32
CACNA1A-213ENST00000593267 SHCBP1Q8NEM2 672 aa13.07□□□□□ -0.32
CACNA1A-213ENST00000593267 LENG9Q96B70 501 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms