RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 PRPF3O43395 683 aaKnown RBP17.67■□□□□ 0.42
TRIM47-206ENST00000592942 ADAMTS4O75173 837 aa17.67■□□□□ 0.42
TRIM47-206ENST00000592942 DUSP11O75319 330 aaKnown RBP17.67■□□□□ 0.42
TRIM47-206ENST00000592942 ADCYAP1R1P41586 468 aa17.67■□□□□ 0.42
TRIM47-206ENST00000592942 RBM25P49756 843 aaKnown RBP17.67■□□□□ 0.42
TRIM47-206ENST00000592942 LRRC41Q15345 812 aa17.67■□□□□ 0.42
TRIM47-206ENST00000592942 GJC2Q5T442 439 aaPredicted RBP17.67■□□□□ 0.42
TRIM47-206ENST00000592942 WWC2Q6AWC2 1192 aa17.67■□□□□ 0.42
TRIM47-206ENST00000592942 IQSEC1Q6DN90 963 aa17.67■□□□□ 0.42
TRIM47-206ENST00000592942 USP17L6PQ6QN14 398 aa17.67■□□□□ 0.42
TRIM47-206ENST00000592942 IWS1Q96ST2 819 aa17.67■□□□□ 0.42
TRIM47-206ENST00000592942 VTA1Q9NP79 307 aa17.67■□□□□ 0.42
TRIM47-206ENST00000592942 STXBP3O00186 592 aa17.66■□□□□ 0.42
TRIM47-206ENST00000592942 PPFIA3O75145 1194 aa17.66■□□□□ 0.42
TRIM47-206ENST00000592942 PGK1P00558 417 aa17.66■□□□□ 0.42
TRIM47-206ENST00000592942 RARBP10826 455 aa17.66■□□□□ 0.42
TRIM47-206ENST00000592942 IFNAR1P17181 557 aa17.66■□□□□ 0.42
TRIM47-206ENST00000592942 SMPD1P17405 629 aa17.66■□□□□ 0.42
TRIM47-206ENST00000592942 NEK4P51957 841 aa17.66■□□□□ 0.42
TRIM47-206ENST00000592942 NKX3-2P78367 333 aa17.66■□□□□ 0.42
TRIM47-206ENST00000592942 CCSAPQ6IQ19 270 aaPredicted RBP17.66■□□□□ 0.42
TRIM47-206ENST00000592942 ARRDC4Q8NCT1 418 aa17.66■□□□□ 0.42
TRIM47-206ENST00000592942 KLHDC9Q8NEP7 349 aa17.66■□□□□ 0.42
TRIM47-206ENST00000592942 PHKBQ93100 1093 aa17.66■□□□□ 0.42
TRIM47-206ENST00000592942 PDCD2LQ9BRP1 358 aa17.66■□□□□ 0.42
TRIM47-206ENST00000592942 C22orf23Q9BZE7 217 aa17.66■□□□□ 0.42
TRIM47-206ENST00000592942 MYADML2A6NDP7 307 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 DNM1LO00429 736 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 NR3C2P08235 984 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 EIF2AK2P19525 551 aaKnown RBP17.65■□□□□ 0.42
TRIM47-206ENST00000592942 TNFAIP2Q03169 654 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 PDE4DQ08499 809 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 SCRN1Q12765 414 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 STK3Q13188 491 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 PFKFB3Q16875 520 aaPredicted RBP17.65■□□□□ 0.42
TRIM47-206ENST00000592942 ARHGEF16Q5VV41 709 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 HEATR3Q7Z4Q2 680 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 NECAB2Q7Z6G3 386 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 FCHSD1Q86WN1 690 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 IL31RAQ8NI17 732 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 UPF3AQ9H1J1 476 aaKnown RBP17.65■□□□□ 0.42
TRIM47-206ENST00000592942 PSTPIP2Q9H939 334 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 XPNPEP3Q9NQH7 507 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 BARHL2Q9NY43 387 aa17.65■□□□□ 0.42
TRIM47-206ENST00000592942 LRRC37A2A6NM11 1700 aa17.64■□□□□ 0.41
TRIM47-206ENST00000592942 ADAMTS3O15072 1205 aa17.64■□□□□ 0.41
TRIM47-206ENST00000592942 PFKFB2O60825 505 aa17.64■□□□□ 0.41
TRIM47-206ENST00000592942 RGS20O76081 388 aa17.64■□□□□ 0.41
TRIM47-206ENST00000592942 GJA9P57773 515 aa17.64■□□□□ 0.41
TRIM47-206ENST00000592942 PGM5Q15124 567 aa17.64■□□□□ 0.41
TRIM47-206ENST00000592942 CCDC62Q6P9F0 684 aa17.64■□□□□ 0.41
TRIM47-206ENST00000592942 VSIG10LQ86VR7 867 aa17.64■□□□□ 0.41
TRIM47-206ENST00000592942 RNF26Q9BY78 433 aaPredicted RBP17.64■□□□□ 0.41
TRIM47-206ENST00000592942 C11orf49Q9H6J7 331 aa17.64■□□□□ 0.41
TRIM47-206ENST00000592942 FRMPD4Q14CM0 1322 aa17.64■□□□□ 0.41
TRIM47-206ENST00000592942 SYNRGQ9UMZ2 1314 aa17.64■□□□□ 0.41
TRIM47-206ENST00000592942 EIF3JO75822 258 aaKnown RBP17.63■□□□□ 0.41
TRIM47-206ENST00000592942 ARIH2O95376 493 aa17.63■□□□□ 0.41
TRIM47-206ENST00000592942 LARGE1O95461 756 aa17.63■□□□□ 0.41
TRIM47-206ENST00000592942 SCG2P13521 617 aa17.63■□□□□ 0.41
TRIM47-206ENST00000592942 MRPS9P82933 396 aaKnown RBP17.63■□□□□ 0.41
TRIM47-206ENST00000592942 STXBP2Q15833 593 aa17.63■□□□□ 0.41
TRIM47-206ENST00000592942 ME3Q16798 604 aa17.63■□□□□ 0.41
TRIM47-206ENST00000592942 DUSP28Q4G0W2 176 aa17.63■□□□□ 0.41
TRIM47-206ENST00000592942 WDR11Q9BZH6 1224 aa17.63■□□□□ 0.41
TRIM47-206ENST00000592942 B4DLN1 442 aa17.62■□□□□ 0.41
TRIM47-206ENST00000592942 CTDNEP1O95476 244 aa17.62■□□□□ 0.41
TRIM47-206ENST00000592942 MRPL12P52815 198 aaKnown RBP17.62■□□□□ 0.41
TRIM47-206ENST00000592942 ANKRD1Q15327 319 aa17.62■□□□□ 0.41
TRIM47-206ENST00000592942 UBE2SQ16763 222 aa17.62■□□□□ 0.41
TRIM47-206ENST00000592942 ZFP91Q96JP5 570 aaPredicted RBP17.62■□□□□ 0.41
TRIM47-206ENST00000592942 MPHOSPH6Q99547 160 aaKnown RBP17.62■□□□□ 0.41
TRIM47-206ENST00000592942 SLC26A6Q9BXS9 759 aa17.62■□□□□ 0.41
TRIM47-206ENST00000592942 SENP6Q9GZR1 1112 aaPredicted RBP17.62■□□□□ 0.41
TRIM47-206ENST00000592942 RIC8AQ9NPQ8 531 aa17.62■□□□□ 0.41
TRIM47-206ENST00000592942 Q9Y3F1 56 aa17.62■□□□□ 0.41
TRIM47-206ENST00000592942 DNAH12Q6ZR08 3092 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 SMCO2A6NFE2 343 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 hCG_1984214I3L0E3 225 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 DYNC1LI2O43237 492 aaPredicted RBP17.61■□□□□ 0.41
TRIM47-206ENST00000592942 DTNBO60941 627 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 MYCLP12524 364 aaPredicted RBP17.61■□□□□ 0.41
TRIM47-206ENST00000592942 CST5P28325 142 aaPredicted RBP17.61■□□□□ 0.41
TRIM47-206ENST00000592942 CLK2P49760 499 aaKnown RBP17.61■□□□□ 0.41
TRIM47-206ENST00000592942 NAPAP54920 295 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 HABP4Q5JVS0 413 aaKnown RBP17.61■□□□□ 0.41
TRIM47-206ENST00000592942 PPP1R18Q6NYC8 613 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 SEPT14Q6ZU15 432 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 RNF180Q86T96 592 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 ZNF713Q8N859 430 aaPredicted RBP17.61■□□□□ 0.41
TRIM47-206ENST00000592942 SMARCC2Q8TAQ2 1214 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 SCFD2Q8WU76 684 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 COPS5Q92905 334 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 CUL5Q93034 780 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 BACH2Q9BYV9 841 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 SLKQ9H2G2 1235 aaPredicted RBP17.61■□□□□ 0.41
TRIM47-206ENST00000592942 PHF24Q9UPV7 400 aa17.61■□□□□ 0.41
TRIM47-206ENST00000592942 ST3GAL1Q11201 340 aa17.6■□□□□ 0.41
TRIM47-206ENST00000592942 KCNA10Q16322 511 aa17.6■□□□□ 0.41
TRIM47-206ENST00000592942 LRRC26Q2I0M4 334 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms