RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 MTMR8Q96EF0 704 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 AGBL1Q96MI9 1066 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 PIGSQ96S52 555 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 MROH8Q9H579 483 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 SEC63Q9UGP8 760 aaKnown RBP13.69□□□□□ -0.22
DDX39A-219ENST00000592927 DOCK3Q8IZD9 2030 aa13.69□□□□□ -0.22
DDX39A-219ENST00000592927 ZNF536O15090 1300 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 PNMA6FA0A0J9YX94 578 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 TRIM43BA6NCK2 446 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 STX6O43752 255 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 CTDNEP1O95476 244 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 BRD1O95696 1058 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 ALAS1P13196 640 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 ERCC3P19447 782 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 TRAF1Q13077 416 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 TKFCQ3LXA3 575 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 LARP1BQ659C4 914 aaKnown RBP13.68□□□□□ -0.22
DDX39A-219ENST00000592927 SLC39A5Q6ZMH5 540 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 SH3RF1Q7Z6J0 888 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 FBXO11Q86XK2 927 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 TRIM43Q96BQ3 446 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-219ENST00000592927 PORCNQ9H237 461 aa13.68□□□□□ -0.22
DDX39A-219ENST00000592927 A0A0G2JMZ2 1700 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 CNTNAP5Q8WYK1 1306 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 STK36Q9NRP7 1315 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-219ENST00000592927 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-219ENST00000592927 DNM1LO00429 736 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 JAK2O60674 1132 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 IFNAR1P17181 557 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 SYT1P21579 422 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 EPHB4P54760 987 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 AKAP17AQ02040 695 aaKnown RBP13.67□□□□□ -0.22
DDX39A-219ENST00000592927 FUT2Q10981 343 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 USH1GQ495M9 461 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 TMEM31Q5JXX7 168 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 CLEC17AQ6ZS10 378 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 PLEKHH3Q7Z736 793 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 CHST13Q8NET6 341 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 USP6NLQ92738 828 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 TIFAQ96CG3 184 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 TRERF1Q96PN7 1200 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 AMNQ9BXJ7 453 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 PRDM12Q9H4Q4 367 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 PDLIM7Q9NR12 457 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 HOMER2Q9NSB8 354 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 FBXO40Q9UH90 709 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 RIPK3Q9Y572 518 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 IVNS1ABPQ9Y6Y0 642 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 V9GY48 417 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-219ENST00000592927 PARP14Q460N5 1801 aa13.67□□□□□ -0.22
DDX39A-219ENST00000592927 BDP1A6H8Y1 2624 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 hCG_1642624A0A1W2PR95 340 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 ZSCAN22P10073 491 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-219ENST00000592927 BMP1P13497 986 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 RGS2P41220 211 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 SSRP1Q08945 709 aaKnown RBP13.66□□□□□ -0.22
DDX39A-219ENST00000592927 NTRK3Q16288 839 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 TRIM60Q495X7 471 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 GPR142Q7Z601 462 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 TRIM22Q8IYM9 498 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 WASF1Q92558 559 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 TNPO1Q92973 898 aaKnown RBP13.66□□□□□ -0.22
DDX39A-219ENST00000592927 PHKBQ93100 1093 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 GBP4Q96PP9 640 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 SLC26A6Q9BXS9 759 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 RNF146Q9NTX7 359 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 DDX20Q9UHI6 824 aaKnown RBP13.66□□□□□ -0.22
DDX39A-219ENST00000592927 PCDHA1Q9Y5I3 950 aa13.66□□□□□ -0.22
DDX39A-219ENST00000592927 ABCB11O95342 1321 aa13.65□□□□□ -0.22
DDX39A-219ENST00000592927 LTBP2Q14767 1821 aa13.65□□□□□ -0.22
DDX39A-219ENST00000592927 PRPF3O43395 683 aaKnown RBP13.65□□□□□ -0.22
DDX39A-219ENST00000592927 STRNO43815 780 aa13.65□□□□□ -0.22
DDX39A-219ENST00000592927 PPP1R11O60927 126 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-219ENST00000592927 FCER1AP12319 257 aa13.65□□□□□ -0.22
DDX39A-219ENST00000592927 TAL1P17542 331 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-219ENST00000592927 CNGA1P29973 690 aa13.65□□□□□ -0.22
DDX39A-219ENST00000592927 GJC2Q5T442 439 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-219ENST00000592927 MMP19Q99542 508 aa13.65□□□□□ -0.22
DDX39A-219ENST00000592927 RNF26Q9BY78 433 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-219ENST00000592927 ACAD9Q9H845 621 aa13.65□□□□□ -0.22
DDX39A-219ENST00000592927 ORC3Q9UBD5 711 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-219ENST00000592927 ZDHHC9Q9Y397 364 aa13.65□□□□□ -0.22
DDX39A-219ENST00000592927 MRPL11Q9Y3B7 192 aaKnown RBP13.65□□□□□ -0.22
DDX39A-219ENST00000592927 ATP6V1DQ9Y5K8 247 aa13.65□□□□□ -0.22
DDX39A-219ENST00000592927 SLC15A5A6NIM6 579 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 PPFIA3O75145 1194 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 IGFBP4P22692 258 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 PTPREP23469 700 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 ITGB8P26012 769 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 PKP1Q13835 747 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 KCTD2Q14681 263 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 MUM1L1Q5H9M0 696 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 MORN1Q5T089 497 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 HEATR3Q7Z4Q2 680 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 ABRAQ8N0Z2 381 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 ANKRD35Q8N283 1001 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 DDX11Q96FC9 970 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 MTMR6Q9Y217 621 aa13.64□□□□□ -0.23
DDX39A-219ENST00000592927 PLXNB2O15031 1838 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms