RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 H0YGN5 161 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 NR3C2P08235 984 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 COL6A1P12109 1028 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 HSD17B4P51659 736 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 RCAN1P53805 252 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 TTLL4Q14679 1199 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 KCNA10Q16322 511 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 TAPT1Q6NXT6 567 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 TLK2Q86UE8 772 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 MORC4Q8TE76 937 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 TSEN34Q9BSV6 310 aaKnown RBP11.61□□□□□ -0.55
BRCA1-227ENST00000591849 UPF3BQ9BZI7 483 aaKnown RBP11.61□□□□□ -0.55
BRCA1-227ENST00000591849 TM6SF1Q9BZW5 370 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 PSTPIP2Q9H939 334 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 PXMP2Q9NR77 195 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 PRKAG2Q9UGJ0 569 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 COLQQ9Y215 455 aaPredicted RBP11.61□□□□□ -0.55
BRCA1-227ENST00000591849 ATP11BQ9Y2G3 1177 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 LAMA3Q16787 3333 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 SYNRGQ9UMZ2 1314 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 ZNFX1Q9P2E3 1918 aaKnown RBP11.6□□□□□ -0.55
BRCA1-227ENST00000591849 MOXD2PA6NHM9 499 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 EIF3JO75822 258 aaKnown RBP11.6□□□□□ -0.55
BRCA1-227ENST00000591849 TXNP10599 105 aaKnown RBP11.6□□□□□ -0.55
BRCA1-227ENST00000591849 SMPD1P17405 629 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 CCND2P30279 289 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 ADD1P35611 737 aaKnown RBP11.6□□□□□ -0.55
BRCA1-227ENST00000591849 NAPAP54920 295 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 GJA9P57773 515 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 CCT2P78371 535 aaKnown RBP11.6□□□□□ -0.55
BRCA1-227ENST00000591849 LRRC26Q2I0M4 334 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 CPLX2Q6PUV4 134 aaKnown RBP11.6□□□□□ -0.55
BRCA1-227ENST00000591849 SLC39A5Q6ZMH5 540 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 OR6J1Q8NGC5 347 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 SCFD2Q8WU76 684 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 GLT1D1Q96MS3 346 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 KATNBL1Q9H079 304 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 STARD7Q9NQZ5 370 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 COL20A1Q9P218 1284 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 PHF24Q9UPV7 400 aa11.6□□□□□ -0.55
BRCA1-227ENST00000591849 CPLX1O14810 134 aa11.59□□□□□ -0.55
BRCA1-227ENST00000591849 OPLAHO14841 1288 aa11.59□□□□□ -0.55
BRCA1-227ENST00000591849 NKRFO15226 690 aaKnown RBP eCLIP11.59□□□□□ -0.55
BRCA1-227ENST00000591849 ADAMTS4O75173 837 aa11.59□□□□□ -0.55
BRCA1-227ENST00000591849 EDNRBP24530 442 aa11.59□□□□□ -0.55
BRCA1-227ENST00000591849 CDC27P30260 824 aa11.59□□□□□ -0.55
BRCA1-227ENST00000591849 ACLYP53396 1101 aa11.59□□□□□ -0.55
BRCA1-227ENST00000591849 RTP1P59025 263 aa11.59□□□□□ -0.55
BRCA1-227ENST00000591849 ANAPC15P60006 121 aa11.59□□□□□ -0.55
BRCA1-227ENST00000591849 BEX3Q00994 111 aa11.59□□□□□ -0.55
BRCA1-227ENST00000591849 FSCN1Q16658 493 aaKnown RBP11.59□□□□□ -0.55
BRCA1-227ENST00000591849 DUSP28Q4G0W2 176 aa11.59□□□□□ -0.55
BRCA1-227ENST00000591849 GPKOWQ92917 476 aaPredicted RBP eCLIP11.59□□□□□ -0.55
BRCA1-227ENST00000591849 LARP6Q9BRS8 491 aaKnown RBP11.59□□□□□ -0.55
BRCA1-227ENST00000591849 UPF3AQ9H1J1 476 aaKnown RBP11.59□□□□□ -0.55
BRCA1-227ENST00000591849 EHMT1Q9H9B1 1298 aa11.59□□□□□ -0.55
BRCA1-227ENST00000591849 RBM27Q9P2N5 1060 aaKnown RBP11.59□□□□□ -0.55
BRCA1-227ENST00000591849 ZMYND8Q9ULU4 1186 aaPredicted RBP11.59□□□□□ -0.55
BRCA1-227ENST00000591849 Q9Y3F1 56 aa11.59□□□□□ -0.55
BRCA1-227ENST00000591849 FRMPD3Q5JV73 1810 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 A0A1W2PQ45 241 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-227ENST00000591849 A0A1W2PQY0 241 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 RBM47A0AV96 593 aaKnown RBP11.58□□□□□ -0.56
BRCA1-227ENST00000591849 MYADML2A6NDP7 307 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 SPDYE3A6NKU9 549 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 ASGR1P07306 291 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 MYL3P08590 195 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 SYN1P17600 705 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 PDIA3P30101 505 aaKnown RBP11.58□□□□□ -0.56
BRCA1-227ENST00000591849 STK3Q13188 491 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 ANKRD1Q15327 319 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 GNPTABQ3T906 1256 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 USP17L6PQ6QN14 398 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 FBXL16Q8N461 479 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 KLHDC9Q8NEP7 349 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 PDCD2LQ9BRP1 358 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 PRDM5Q9NQX1 630 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-227ENST00000591849 GNEQ9Y223 722 aaKnown RBP11.58□□□□□ -0.56
BRCA1-227ENST00000591849 MRVI1Q9Y6F6 885 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 CNTNAP5Q8WYK1 1306 aa11.58□□□□□ -0.56
BRCA1-227ENST00000591849 DCDC2CA8MYV0 355 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 hCG_1984214I3L0E3 225 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 ADCY6O43306 1168 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 CABYRO75952 493 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 GH1P01241 217 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 CST5P28325 142 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-227ENST00000591849 CPT1AP50416 773 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 ADCY7P51828 1080 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 IRX5P78411 483 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-227ENST00000591849 GHRHRQ02643 423 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 SSRP1Q08945 709 aaKnown RBP11.57□□□□□ -0.56
BRCA1-227ENST00000591849 PGM5Q15124 567 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 LY6KQ17RY6 165 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 KCNV1Q6PIU1 500 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 TRIM22Q8IYM9 498 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 ZNF713Q8N859 430 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-227ENST00000591849 CCDC12Q8WUD4 166 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-227ENST00000591849 ZNF274Q96GC6 653 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-227ENST00000591849 ZFP91Q96JP5 570 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-227ENST00000591849 LBHD1Q9BQE6 289 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms