RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	HOXA13	P31271	388 aa	Predicted RBP	18.97	■□□□□ 0.63
CIRBP-233	ENST00000591622	RTP1	P59025	263 aa		18.97	■□□□□ 0.63
CIRBP-233	ENST00000591622	DUSP28	Q4G0W2	176 aa		18.97	■□□□□ 0.63
CIRBP-233	ENST00000591622	ARHGEF16	Q5VV41	709 aa		18.97	■□□□□ 0.63
CIRBP-233	ENST00000591622	SCFD2	Q8WU76	684 aa		18.97	■□□□□ 0.63
CIRBP-233	ENST00000591622	AP5M1	Q9H0R1	490 aa		18.97	■□□□□ 0.63
CIRBP-233	ENST00000591622	RBM28	Q9NW13	759 aa	Known RBP	18.97	■□□□□ 0.63
CIRBP-233	ENST00000591622	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.97	■□□□□ 0.63
CIRBP-233	ENST00000591622	COLQ	Q9Y215	455 aa	Predicted RBP	18.97	■□□□□ 0.63
CIRBP-233	ENST00000591622	DNAH12	Q6ZR08	3092 aa		18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	GCOM1	H8Y6P7	765 aa	Predicted RBP	18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	DYNC1LI2	O43237	492 aa	Predicted RBP	18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	ASGR1	P07306	291 aa		18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	POLR2M	P0CAP2	368 aa		18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	SYN1	P17600	705 aa		18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	EIF2AK2	P19525	551 aa	Known RBP	18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	PTGS1	P23219	599 aa		18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	RCAN1	P53805	252 aa		18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	STXBP2	Q15833	593 aa		18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622		Q6ZUG5	572 aa		18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	FBXL16	Q8N461	479 aa		18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	CCDC82	Q8N4S0	544 aa		18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	PXMP2	Q9NR77	195 aa		18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	ATP11B	Q9Y2G3	1177 aa		18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	ALPK3	Q96L96	1907 aa		18.96	■□□□□ 0.63
CIRBP-233	ENST00000591622	MCM3AP	O60318	1980 aa		18.95	■□□□□ 0.62
CIRBP-233	ENST00000591622	CAST	P20810	708 aa	Known RBP	18.95	■□□□□ 0.62
CIRBP-233	ENST00000591622	BEX3	Q00994	111 aa		18.95	■□□□□ 0.62
CIRBP-233	ENST00000591622	FSCN1	Q16658	493 aa	Known RBP	18.95	■□□□□ 0.62
CIRBP-233	ENST00000591622	RTN1	Q16799	776 aa		18.95	■□□□□ 0.62
CIRBP-233	ENST00000591622	TRIM60	Q495X7	471 aa		18.95	■□□□□ 0.62
CIRBP-233	ENST00000591622	CHRDL2	Q6WN34	429 aa		18.95	■□□□□ 0.62
CIRBP-233	ENST00000591622	BRF1	Q92994	677 aa		18.95	■□□□□ 0.62
CIRBP-233	ENST00000591622	GLT1D1	Q96MS3	346 aa		18.95	■□□□□ 0.62
CIRBP-233	ENST00000591622	STARD7	Q9NQZ5	370 aa		18.95	■□□□□ 0.62
CIRBP-233	ENST00000591622	GOLGA8A	A7E2F4	631 aa		18.94	■□□□□ 0.62
CIRBP-233	ENST00000591622	GOLGA8B	A8MQT2	603 aa		18.94	■□□□□ 0.62
CIRBP-233	ENST00000591622	NR3C2	P08235	984 aa		18.94	■□□□□ 0.62
CIRBP-233	ENST00000591622	APOBR	Q0VD83	1088 aa		18.94	■□□□□ 0.62
CIRBP-233	ENST00000591622	PPP2R5B	Q15173	497 aa		18.94	■□□□□ 0.62
CIRBP-233	ENST00000591622	PDCD2L	Q9BRP1	358 aa		18.94	■□□□□ 0.62
CIRBP-233	ENST00000591622	AGXT2	Q9BYV1	514 aa		18.94	■□□□□ 0.62
CIRBP-233	ENST00000591622	ZSWIM6	Q9HCJ5	1215 aa		18.94	■□□□□ 0.62
CIRBP-233	ENST00000591622	ELP1	O95163	1332 aa		18.94	■□□□□ 0.62
CIRBP-233	ENST00000591622	hCG_1642624	A0A1W2PR95	340 aa		18.93	■□□□□ 0.62
CIRBP-233	ENST00000591622	NKRF	O15226	690 aa	Known RBP eCLIP	18.93	■□□□□ 0.62
CIRBP-233	ENST00000591622	EIF3J	O75822	258 aa	Known RBP	18.93	■□□□□ 0.62
CIRBP-233	ENST00000591622	TXN	P10599	105 aa	Known RBP	18.93	■□□□□ 0.62
CIRBP-233	ENST00000591622	FUT2	Q10981	343 aa		18.93	■□□□□ 0.62
CIRBP-233	ENST00000591622	TTLL4	Q14679	1199 aa		18.93	■□□□□ 0.62
CIRBP-233	ENST00000591622	RUFY3	Q7L099	469 aa		18.93	■□□□□ 0.62
CIRBP-233	ENST00000591622	FCHSD1	Q86WN1	690 aa		18.93	■□□□□ 0.62
CIRBP-233	ENST00000591622	PRO3102	Q9H379	93 aa		18.93	■□□□□ 0.62
CIRBP-233	ENST00000591622	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.93	■□□□□ 0.62
CIRBP-233	ENST00000591622	NAP1L2	Q9ULW6	460 aa	Predicted RBP	18.93	■□□□□ 0.62
CIRBP-233	ENST00000591622	ZEB2	O60315	1214 aa		18.92	■□□□□ 0.62
CIRBP-233	ENST00000591622	TLE2	Q04725	743 aa		18.92	■□□□□ 0.62
CIRBP-233	ENST00000591622	PGM5	Q15124	567 aa		18.92	■□□□□ 0.62
CIRBP-233	ENST00000591622	HABP4	Q5JVS0	413 aa	Known RBP	18.92	■□□□□ 0.62
CIRBP-233	ENST00000591622	CCDC62	Q6P9F0	684 aa		18.92	■□□□□ 0.62
CIRBP-233	ENST00000591622	SEPT14	Q6ZU15	432 aa		18.92	■□□□□ 0.62
CIRBP-233	ENST00000591622	VSIG10L	Q86VR7	867 aa		18.92	■□□□□ 0.62
CIRBP-233	ENST00000591622	VTI1A	Q96AJ9	217 aa		18.92	■□□□□ 0.62
CIRBP-233	ENST00000591622	TM6SF1	Q9BZW5	370 aa		18.92	■□□□□ 0.62
CIRBP-233	ENST00000591622	CYP46A1	Q9Y6A2	500 aa		18.92	■□□□□ 0.62
CIRBP-233	ENST00000591622	CNTNAP5	Q8WYK1	1306 aa		18.92	■□□□□ 0.62
CIRBP-233	ENST00000591622	MYH6	P13533	1939 aa		18.92	■□□□□ 0.62
CIRBP-233	ENST00000591622	CCDC196	A0A1B0GTZ2	297 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	PIK3CD	O00329	1044 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	CABYR	O75952	493 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	ARIH2	O95376	493 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	MYCL	P12524	364 aa	Predicted RBP	18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	CDC27	P30260	824 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	CPT1A	P50416	773 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	METAP2	P50579	478 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	CXCL17	Q6UXB2	119 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	ANKRD33	Q7Z3H0	272 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	HEATR3	Q7Z4Q2	680 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	OR6J1	Q8NGC5	347 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	CUL5	Q93034	780 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	GDF15	Q99988	308 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	PSTPIP2	Q9H939	334 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	RBM27	Q9P2N5	1060 aa	Known RBP	18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	PRKAG2	Q9UGJ0	569 aa		18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622		V9GY48	417 aa	Predicted RBP	18.91	■□□□□ 0.62
CIRBP-233	ENST00000591622	MEIS2	O14770	477 aa		18.9	■□□□□ 0.62
CIRBP-233	ENST00000591622	ADD1	P35611	737 aa	Known RBP	18.9	■□□□□ 0.62
CIRBP-233	ENST00000591622	MAGEA10	P43363	369 aa	Predicted RBP	18.9	■□□□□ 0.62
CIRBP-233	ENST00000591622	EVC	P57679	992 aa		18.9	■□□□□ 0.62
CIRBP-233	ENST00000591622	USP17L6P	Q6QN14	398 aa		18.9	■□□□□ 0.62
CIRBP-233	ENST00000591622	IL31RA	Q8NI17	732 aa		18.9	■□□□□ 0.62
CIRBP-233	ENST00000591622	SMARCC2	Q8TAQ2	1214 aa		18.9	■□□□□ 0.62
CIRBP-233	ENST00000591622	COPS5	Q92905	334 aa		18.9	■□□□□ 0.62
CIRBP-233	ENST00000591622	TOX2	Q96NM4	488 aa		18.9	■□□□□ 0.62
CIRBP-233	ENST00000591622		A0A0U1RQG5	324 aa	Predicted RBP	18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	PQBP1	O60828	265 aa	Known RBP	18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	EIF5B	O60841	1220 aa	Known RBP	18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	CCND2	P30279	289 aa		18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	BMP8B	P34820	402 aa		18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	CDK7	P50613	346 aa		18.89	■□□□□ 0.61

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