RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 INTS13Q9NVM9 706 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 SCN11AQ9UI33 1791 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 ARFGEF2Q9Y6D5 1785 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 CEP104O60308 925 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 IL2RBP14784 551 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 RILPL1Q5EBL4 403 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 STRBPQ96SI9 672 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 CDC5LQ99459 802 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 OCEL1Q9H607 264 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 PCDHB6Q9Y5E3 794 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 TMEM221A6NGB7 291 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 DNAJC8O75937 253 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 PDE8BO95263 885 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 ADCY1Q08828 1119 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 HOOK3Q86VS8 718 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 IQCF2Q8IXL9 164 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 ATP11CQ8NB49 1132 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 NACAP1Q9BZK3 213 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 POLD4Q9HCU8 107 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 ATXN10Q9UBB4 475 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 SYNPO2Q9UMS6 1093 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 MMP1P03956 469 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 HLFQ16534 295 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 TEX9Q8N6V9 391 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 ARL8AQ96BM9 186 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.47□□□□□ -0.258e-9■■□□□ 13.9
SMARCA4-217ENST00000591595 UBAC1Q9BSL1 405 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 ASAP1Q9ULH1 1129 aa13.47□□□□□ -0.25
SMARCA4-217ENST00000591595 MINDY4BA8MYZ0 360 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 ZMYND10O75800 440 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 UQCRFS1P1P0C7P4 283 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 CTSWP56202 376 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 TTMPQ5BVD1 217 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 TC2NQ8N9U0 490 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 MIGA1Q8NAN2 632 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 AGAP11Q8TF27 550 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 CYFIP2Q96F07 1278 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 BRD8Q9H0E9 1235 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 FAM217BQ9NTX9 383 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 TUBGCP4Q9UGJ1 667 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 E7EVH7 732 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 PRKAB2O43741 272 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 CSF1RP07333 972 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 RIPK1Q13546 671 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 MTF1Q14872 753 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 USP49Q70CQ1 688 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 SGMS1Q86VZ5 419 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 RNPC3Q96LT9 517 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 KRT23Q9C075 422 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 CNNM2Q9H8M5 875 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 SWAP70Q9UH65 585 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 CEP131Q9UPN4 1083 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 SLC4A4Q9Y6R1 1079 aa13.46□□□□□ -0.25
SMARCA4-217ENST00000591595 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.46□□□□□ -0.26
SMARCA4-217ENST00000591595 CLTAP09496 248 aa13.46□□□□□ -0.26
SMARCA4-217ENST00000591595 IFNAR1P17181 557 aa13.46□□□□□ -0.26
SMARCA4-217ENST00000591595 PTPREP23469 700 aa13.46□□□□□ -0.26
SMARCA4-217ENST00000591595 NCAPH2Q6IBW4 605 aa13.46□□□□□ -0.26
SMARCA4-217ENST00000591595 PNMA8AQ86V59 439 aaPredicted RBP13.46□□□□□ -0.26
SMARCA4-217ENST00000591595 SLF2Q8IX21 1173 aa13.46□□□□□ -0.26
SMARCA4-217ENST00000591595 CCDC155Q8N6L0 562 aa13.46□□□□□ -0.26
SMARCA4-217ENST00000591595 EHBP1Q8NDI1 1231 aa13.46□□□□□ -0.26
SMARCA4-217ENST00000591595 ENOX1Q8TC92 643 aaKnown RBP13.46□□□□□ -0.26
SMARCA4-217ENST00000591595 MTA3Q9BTC8 594 aa13.46□□□□□ -0.26
SMARCA4-217ENST00000591595 hCG_1642624A0A1W2PR95 340 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 AKR1B15C9JRZ8 316 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 EPB41P11171 864 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 LIFRP42702 1097 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 SLC4A8Q2Y0W8 1093 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 SH2D3CQ8N5H7 860 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 GBP7Q8N8V2 638 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 SPIRE2Q8WWL2 714 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 NAPGQ99747 312 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 LMTK3Q96Q04 1460 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 SOWAHDA6NJG2 315 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 XBP1P17861 261 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 TOB1P50616 345 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 BTG3Q14201 252 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 LACTB2Q53H82 288 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 GIGYF2Q6Y7W6 1299 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 SLC35F6Q8N357 371 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 CNBD1Q8NA66 436 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 SPATA5Q8NB90 893 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 WHAMMQ8TF30 809 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 CSRNP2Q9H175 543 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 LRP2BPQ9P2M1 347 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 PAIP2BQ9ULR5 123 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 TMEM94Q12767 1356 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 WDR17Q8IZU2 1322 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 DEXIO95424 95 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 CASP1P29466 404 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 CBX3Q13185 183 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 TRIM28Q13263 835 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 KANK3Q6NY19 840 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 NLRP10Q86W26 655 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 OXER1Q8TDS5 423 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 EPB41L4AQ9HCS5 686 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 RHBDL2Q9NX52 303 aa13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 FBXO2Q9UK22 296 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-217ENST00000591595 IQSEC3Q9UPP2 1182 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms