RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 NHEJ1Q9H9Q4 299 aaPredicted RBP12.09□□□□□ -0.47
VPS4B-206ENST00000591475 KBTBD4Q9NVX7 518 aa12.09□□□□□ -0.47
VPS4B-206ENST00000591475 TFR2Q9UP52 801 aa12.09□□□□□ -0.47
VPS4B-206ENST00000591475 FAM205AQ6ZU69 1335 aa12.09□□□□□ -0.47
VPS4B-206ENST00000591475 BICDL2A1A5D9 508 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 TSPY2A6NKD2 308 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 CSGALNACT2Q8N6G5 542 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 TBC1D22AQ8WUA7 517 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 PCMTD1Q96MG8 357 aaPredicted RBP12.08□□□□□ -0.48
VPS4B-206ENST00000591475 CUEDC2Q9H467 287 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 KAT14Q9H8E8 782 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 MAGEF1Q9HAY2 307 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 DCP1AQ9NPI6 582 aaPredicted RBP12.08□□□□□ -0.48
VPS4B-206ENST00000591475 ATP8A2Q9NTI2 1148 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 ARPP21Q9UBL0 812 aaPredicted RBP12.08□□□□□ -0.48
VPS4B-206ENST00000591475 PP2D1A8MPX8 630 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 VGLL3A8MV65 326 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 LAD1O00515 517 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 IDEP14735 1019 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 CCNE1P24864 410 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 PPP1R2P41236 205 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 CDK17Q00537 523 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 TBC1D8BQ0IIM8 1120 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 KIF5AQ12840 1032 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 SBK1Q52WX2 424 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 FOXR1Q6PIV2 292 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 GPKOWQ92917 476 aaPredicted RBP eCLIP12.08□□□□□ -0.48
VPS4B-206ENST00000591475 P2RX5Q93086 422 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 NSUN4Q96CB9 384 aaKnown RBP12.08□□□□□ -0.48
VPS4B-206ENST00000591475 PURBQ96QR8 312 aaKnown RBP12.08□□□□□ -0.48
VPS4B-206ENST00000591475 DUSP9Q99956 384 aaKnown RBP12.08□□□□□ -0.48
VPS4B-206ENST00000591475 VPS33BQ9H267 617 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 AGPAT5Q9NUQ2 364 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 RSPH14Q9UHP6 348 aa12.08□□□□□ -0.48
VPS4B-206ENST00000591475 A0A1W2PQJ5 194 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 RCCD1A6NED2 376 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 PPFIA4O75335 1185 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 PRDX5P30044 214 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 PRPHP41219 470 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 MTIF2P46199 727 aaKnown RBP12.07□□□□□ -0.48
VPS4B-206ENST00000591475 VAV2P52735 878 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 EVX2Q03828 476 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 FIGNQ5HY92 759 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 GALNT17Q6IS24 598 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 RCSD1Q6JBY9 416 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 CCNI2Q6ZMN8 369 aaPredicted RBP12.07□□□□□ -0.48
VPS4B-206ENST00000591475 RASGRP4Q8TDF6 673 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 SECISBP2LQ93073 1101 aaKnown RBP12.07□□□□□ -0.48
VPS4B-206ENST00000591475 IQCDQ96DY2 449 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 CNOT6LQ96LI5 555 aaKnown RBP12.07□□□□□ -0.48
VPS4B-206ENST00000591475 LACRTQ9GZZ8 138 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 TMEM60Q9H2L4 133 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 JADE2Q9NQC1 790 aa12.07□□□□□ -0.48
VPS4B-206ENST00000591475 ZC3H4Q9UPT8 1303 aaKnown RBP12.07□□□□□ -0.48
VPS4B-206ENST00000591475 RASSF10A6NK89 507 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 M0R2N6 131 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 LDHBP07195 334 aaKnown RBP12.06□□□□□ -0.48
VPS4B-206ENST00000591475 MAGEA9P43362 315 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 GNAQP50148 359 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 MECOMQ03112 1051 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 SPA17Q15506 151 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 AOC3Q16853 763 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 DOK7Q18PE1 504 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 DAGLBQ8NCG7 672 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 RUBCNQ92622 972 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
VPS4B-206ENST00000591475 PLIN2Q99541 437 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 SELENOOQ9BVL4 669 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 PCDHA6Q9UN73 950 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 JAG2Q9Y219 1238 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 PCDHA8Q9Y5H6 950 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 MACROD2A1Z1Q3 448 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 ZNF185O15231 689 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 USO1O60763 962 aaKnown RBP12.06□□□□□ -0.48
VPS4B-206ENST00000591475 CYP2D6P10635 497 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 GGCXP38435 758 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 GTF2IP78347 998 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 PDE4DQ08499 809 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 C2orf54Q08AI8 447 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 GRM4Q14833 912 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 MFSD14BQ5SR56 506 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 FKBP15Q5T1M5 1219 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 TRIM58Q8NG06 486 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 AK8Q96MA6 479 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 ERGIC2Q96RQ1 377 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 NOC4LQ9BVI4 516 aaKnown RBP12.06□□□□□ -0.48
VPS4B-206ENST00000591475 EFCC1Q9HA90 598 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 BCS1LQ9Y276 419 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 UTRNP46939 3433 aa12.06□□□□□ -0.48
VPS4B-206ENST00000591475 PDE2AO00408 941 aaPredicted RBP12.05□□□□□ -0.48
VPS4B-206ENST00000591475 PPIP5K2O43314 1243 aa12.05□□□□□ -0.48
VPS4B-206ENST00000591475 TACC1O75410 805 aa12.05□□□□□ -0.48
VPS4B-206ENST00000591475 ZMYND10O75800 440 aa12.05□□□□□ -0.48
VPS4B-206ENST00000591475 KLK7P49862 253 aa12.05□□□□□ -0.48
VPS4B-206ENST00000591475 NT5C2P49902 561 aa12.05□□□□□ -0.48
VPS4B-206ENST00000591475 INF2Q27J81 1249 aa12.05□□□□□ -0.48
VPS4B-206ENST00000591475 ANKRD40Q6AI12 368 aa12.05□□□□□ -0.48
VPS4B-206ENST00000591475 CABP7Q86V35 215 aa12.05□□□□□ -0.48
VPS4B-206ENST00000591475 DGKHQ86XP1 1220 aa12.05□□□□□ -0.48
VPS4B-206ENST00000591475 DZIP1Q86YF9 867 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms