RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 NBPF20Q3BBV1 942 aa18.43■□□□□ 0.54
CIRBP-230ENST00000591055 FAM47CQ5HY64 1035 aa18.43■□□□□ 0.54
CIRBP-230ENST00000591055 COPS5Q92905 334 aa18.43■□□□□ 0.54
CIRBP-230ENST00000591055 NKX2-4Q9H2Z4 354 aa18.43■□□□□ 0.54
CIRBP-230ENST00000591055 SLC4A7Q9Y6M7 1214 aa18.43■□□□□ 0.54
CIRBP-230ENST00000591055 SCN10AQ9Y5Y9 1956 aa18.42■□□□□ 0.54
CIRBP-230ENST00000591055 LAMA4Q16363 1823 aa18.42■□□□□ 0.54
CIRBP-230ENST00000591055 ZBBXA8MT70 800 aa18.42■□□□□ 0.54
CIRBP-230ENST00000591055 IGHDP01880 384 aa18.42■□□□□ 0.54
CIRBP-230ENST00000591055 TXNP10599 105 aaKnown RBP18.42■□□□□ 0.54
CIRBP-230ENST00000591055 TTLL4Q14679 1199 aa18.42■□□□□ 0.54
CIRBP-230ENST00000591055 CDC37Q16543 378 aaPredicted RBP18.42■□□□□ 0.54
CIRBP-230ENST00000591055 PPM1EQ8WY54 764 aa18.42■□□□□ 0.54
CIRBP-230ENST00000591055 ANKS1AQ92625 1134 aa18.42■□□□□ 0.54
CIRBP-230ENST00000591055 SYMPKQ92797 1274 aaKnown RBP18.42■□□□□ 0.54
CIRBP-230ENST00000591055 MAF1Q9H063 256 aa18.42■□□□□ 0.54
CIRBP-230ENST00000591055 SLC28A3Q9HAS3 691 aa18.42■□□□□ 0.54
CIRBP-230ENST00000591055 ABCB11O95342 1321 aa18.42■□□□□ 0.54
CIRBP-230ENST00000591055 GBF1Q92538 1859 aa18.41■□□□□ 0.54
CIRBP-230ENST00000591055 A6NJR5 290 aa18.41■□□□□ 0.54
CIRBP-230ENST00000591055 B4E1Z4 1266 aa18.41■□□□□ 0.54
CIRBP-230ENST00000591055 PFKMP08237 780 aa18.41■□□□□ 0.54
CIRBP-230ENST00000591055 ASPRV1Q53RT3 343 aa18.41■□□□□ 0.54
CIRBP-230ENST00000591055 NFRKBQ6P4R8 1299 aa18.41■□□□□ 0.54
CIRBP-230ENST00000591055 ADGRF4Q8IZF3 695 aa18.41■□□□□ 0.54
CIRBP-230ENST00000591055 VWCEQ96DN2 955 aa18.41■□□□□ 0.54
CIRBP-230ENST00000591055 ZSCAN10Q96SZ4 725 aaPredicted RBP18.41■□□□□ 0.54
CIRBP-230ENST00000591055 DSCC1Q9BVC3 393 aa18.41■□□□□ 0.54
CIRBP-230ENST00000591055 YBX2Q9Y2T7 364 aaKnown RBP18.41■□□□□ 0.54
CIRBP-230ENST00000591055 ARIH2O95376 493 aa18.4■□□□□ 0.54
CIRBP-230ENST00000591055 RABGGTBP53611 331 aa18.4■□□□□ 0.54
CIRBP-230ENST00000591055 IMMTQ16891 758 aaKnown RBP18.4■□□□□ 0.54
CIRBP-230ENST00000591055 DEFB128Q7Z7B8 93 aa18.4■□□□□ 0.54
CIRBP-230ENST00000591055 ENAHQ8N8S7 591 aaPredicted RBP18.4■□□□□ 0.54
CIRBP-230ENST00000591055 PPP1R13LQ8WUF5 828 aa18.4■□□□□ 0.54
CIRBP-230ENST00000591055 TBC1D5Q92609 795 aa18.4■□□□□ 0.54
CIRBP-230ENST00000591055 CTNNA3Q9UI47 895 aa18.4■□□□□ 0.54
CIRBP-230ENST00000591055 DHX16O60231 1041 aaKnown RBP18.39■□□□□ 0.53
CIRBP-230ENST00000591055 PARP1P09874 1014 aaKnown RBP18.39■□□□□ 0.53
CIRBP-230ENST00000591055 IGFBP4P22692 258 aa18.39■□□□□ 0.53
CIRBP-230ENST00000591055 PTPN11Q06124 597 aaPredicted RBP18.39■□□□□ 0.53
CIRBP-230ENST00000591055 ADGRE1Q14246 886 aa18.39■□□□□ 0.53
CIRBP-230ENST00000591055 QRICH1Q2TAL8 776 aa18.39■□□□□ 0.53
CIRBP-230ENST00000591055 TJAP1Q5JTD0 557 aa18.39■□□□□ 0.53
CIRBP-230ENST00000591055 MCF2L2Q86YR7 1114 aa18.39■□□□□ 0.53
CIRBP-230ENST00000591055 SYTL5Q8TDW5 730 aaPredicted RBP18.39■□□□□ 0.53
CIRBP-230ENST00000591055 NSUN6Q8TEA1 469 aaKnown RBP18.39■□□□□ 0.53
CIRBP-230ENST00000591055 YTHDC1Q96MU7 727 aaKnown RBP18.39■□□□□ 0.53
CIRBP-230ENST00000591055 TAAR1Q96RJ0 339 aa18.39■□□□□ 0.53
CIRBP-230ENST00000591055 KRT23Q9C075 422 aa18.39■□□□□ 0.53
CIRBP-230ENST00000591055 PRDM6Q9NQX0 595 aa18.39■□□□□ 0.53
CIRBP-230ENST00000591055 ZSWIM5Q9P217 1185 aa18.39■□□□□ 0.53
CIRBP-230ENST00000591055 PCDHA11Q9Y5I1 949 aa18.39■□□□□ 0.53
CIRBP-230ENST00000591055 SCN5AQ14524 2016 aa18.39■□□□□ 0.53
CIRBP-230ENST00000591055 ATP2A2P16615 1042 aaKnown RBP18.38■□□□□ 0.53
CIRBP-230ENST00000591055 RFC2P35250 354 aa18.38■□□□□ 0.53
CIRBP-230ENST00000591055 CHMP4BP1P59074 171 aa18.38■□□□□ 0.53
CIRBP-230ENST00000591055 CCDC62Q6P9F0 684 aa18.38■□□□□ 0.53
CIRBP-230ENST00000591055 SEPT14Q6ZU15 432 aa18.38■□□□□ 0.53
CIRBP-230ENST00000591055 FBXO11Q86XK2 927 aa18.38■□□□□ 0.53
CIRBP-230ENST00000591055 RETREG2Q8NC44 543 aa18.38■□□□□ 0.53
CIRBP-230ENST00000591055 EXOC6Q8TAG9 804 aa18.38■□□□□ 0.53
CIRBP-230ENST00000591055 IWS1Q96ST2 819 aa18.38■□□□□ 0.53
CIRBP-230ENST00000591055 UBAC1Q9BSL1 405 aa18.38■□□□□ 0.53
CIRBP-230ENST00000591055 VAT1LQ9HCJ6 419 aa18.38■□□□□ 0.53
CIRBP-230ENST00000591055 NOD1Q9Y239 953 aa18.38■□□□□ 0.53
CIRBP-230ENST00000591055 MRPL11Q9Y3B7 192 aaKnown RBP18.38■□□□□ 0.53
CIRBP-230ENST00000591055 MYH6P13533 1939 aa18.38■□□□□ 0.53
CIRBP-230ENST00000591055 NCOR1O75376 2440 aa18.38■□□□□ 0.53
CIRBP-230ENST00000591055 TRANK1O15050 2925 aa18.37■□□□□ 0.53
CIRBP-230ENST00000591055 PITPNM1O00562 1244 aa18.37■□□□□ 0.53
CIRBP-230ENST00000591055 GH1P01241 217 aa18.37■□□□□ 0.53
CIRBP-230ENST00000591055 ACTN1P12814 892 aa18.37■□□□□ 0.53
CIRBP-230ENST00000591055 MYOGP15173 224 aa18.37■□□□□ 0.53
CIRBP-230ENST00000591055 BFSP2Q13515 415 aa18.37■□□□□ 0.53
CIRBP-230ENST00000591055 STXBP2Q15833 593 aa18.37■□□□□ 0.53
CIRBP-230ENST00000591055 CCDC85BQ15834 202 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-230ENST00000591055 PPP2R2DQ66LE6 453 aa18.37■□□□□ 0.53
CIRBP-230ENST00000591055 AFG1LQ8WV93 481 aa18.37■□□□□ 0.53
CIRBP-230ENST00000591055 RMDN3Q96TC7 470 aa18.37■□□□□ 0.53
CIRBP-230ENST00000591055 CNNM2Q9H8M5 875 aa18.37■□□□□ 0.53
CIRBP-230ENST00000591055 JMJD4Q9H9V9 463 aa18.37■□□□□ 0.53
CIRBP-230ENST00000591055 COL20A1Q9P218 1284 aa18.37■□□□□ 0.53
CIRBP-230ENST00000591055 LY6KQ17RY6 165 aa18.36■□□□□ 0.53
CIRBP-230ENST00000591055 IFIT1BQ5T764 474 aaKnown RBP18.36■□□□□ 0.53
CIRBP-230ENST00000591055 ARHGEF16Q5VV41 709 aa18.36■□□□□ 0.53
CIRBP-230ENST00000591055 CHST3Q7LGC8 479 aa18.36■□□□□ 0.53
CIRBP-230ENST00000591055 THEGQ9P2T0 379 aa18.36■□□□□ 0.53
CIRBP-230ENST00000591055 MMP3P08254 477 aa18.35■□□□□ 0.53
CIRBP-230ENST00000591055 IQCF3P0C7M6 154 aa18.35■□□□□ 0.53
CIRBP-230ENST00000591055 ARHGAP1Q07960 439 aa18.35■□□□□ 0.53
CIRBP-230ENST00000591055 ATXN2LQ8WWM7 1075 aaKnown RBP18.35■□□□□ 0.53
CIRBP-230ENST00000591055 FTOQ9C0B1 505 aaKnown RBP eCLIP18.35■□□□□ 0.538e-7■□□□□ 9.3
CIRBP-230ENST00000591055 TRIP12Q14669 1992 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-230ENST00000591055 KIAA1217Q5T5P2 1943 aa18.35■□□□□ 0.53
CIRBP-230ENST00000591055 CFBP00751 764 aa18.34■□□□□ 0.53
CIRBP-230ENST00000591055 EIF2AK2P19525 551 aaKnown RBP18.34■□□□□ 0.53
CIRBP-230ENST00000591055 CASTP20810 708 aaKnown RBP18.34■□□□□ 0.53
CIRBP-230ENST00000591055 PTGISQ16647 500 aa18.34■□□□□ 0.53
CIRBP-230ENST00000591055 TMEM67Q5HYA8 995 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms