RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 NOX5Q96PH1 765 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 RIOK1Q9BRS2 568 aaKnown RBP12.1□□□□□ -0.47
LINC01140-210ENST00000590653 SEMA6BQ9H3T3 888 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 CXorf56Q9H5V9 222 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 MCM9Q9NXL9 1143 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 TBC1D7Q9P0N9 293 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 PCDHA4Q9UN74 947 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 PLAGL2Q9UPG8 496 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 PHRF1Q9P1Y6 1649 aaKnown RBP12.1□□□□□ -0.47
LINC01140-210ENST00000590653 LAMB4A4D0S4 1761 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 KIF1AQ12756 1690 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 PALMO75781 387 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 DDAH1O94760 285 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 TRHP20396 242 aaPredicted RBP12.1□□□□□ -0.47
LINC01140-210ENST00000590653 SF3B2Q13435 895 aaKnown RBP12.1□□□□□ -0.47
LINC01140-210ENST00000590653 RETREG2Q8NC44 543 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 PURBQ96QR8 312 aaKnown RBP12.1□□□□□ -0.47
LINC01140-210ENST00000590653 CCT8L2Q96SF2 557 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 CEP89Q96ST8 783 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 KBTBD4Q9NVX7 518 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 USP17L3A6NCW0 530 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 USP17L4A6NCW7 530 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 ECM2O94769 699 aaPredicted RBP12.09□□□□□ -0.47
LINC01140-210ENST00000590653 USP17L8P0C7I0 530 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 KIF5BP33176 963 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 KCNB1Q14721 858 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 VWA3BQ502W6 1294 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 USP17L1Q7RTZ2 530 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 GLIS3Q8NEA6 775 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 ZNF473Q8WTR7 871 aaKnown RBP12.09□□□□□ -0.47
LINC01140-210ENST00000590653 TFCP2L1Q9NZI6 479 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 CYP19A1P11511 503 aaPredicted RBP12.09□□□□□ -0.47
LINC01140-210ENST00000590653 BICDL1Q6ZP65 573 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 PNMA1Q8ND90 353 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 PCDHA6Q9UN73 950 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 PLAAQ9Y263 795 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 PCDHA8Q9Y5H6 950 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 GOLGA6L10A6NI86 522 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 TMOD1P28289 359 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 CCDC152Q4G0S7 254 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 KLHDC7AQ5VTJ3 777 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 KIAA0895Q8NCT3 520 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 CASKIN2Q8WXE0 1202 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 CCDC114Q96M63 670 aa12.09□□□□□ -0.47
LINC01140-210ENST00000590653 NIP7Q9Y221 180 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC01140-210ENST00000590653 PAK2Q13177 524 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 NLRP14Q86W24 1093 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 MTA3Q9BTC8 594 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 DDX60Q8IY21 1712 aaKnown RBP12.08□□□□□ -0.48
LINC01140-210ENST00000590653 PPP1R37O75864 691 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 CCDC24Q8N4L8 307 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 TBC1D5Q92609 795 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 CDK5RAP3Q96JB5 506 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 SCLT1Q96NL6 688 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 ERGIC2Q96RQ1 377 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 AP1M1Q9BXS5 423 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 EPN3Q9H201 632 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 MKNK2Q9HBH9 465 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 ANAPC4Q9UJX5 808 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 KCPQ6ZWJ8 1503 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 GOLGA6L7A0A1B0GV03 622 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 NAPAP54920 295 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 POLR2FP61218 127 aaKnown RBP12.08□□□□□ -0.48
LINC01140-210ENST00000590653 RAPGEF1Q13905 1077 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 SLC44A5Q8NCS7 719 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 ZNF384Q8TF68 577 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 PACSIN1Q9BY11 444 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 ADAMTS1Q9UHI8 967 aa12.08□□□□□ -0.48
LINC01140-210ENST00000590653 BAZ2AQ9UIF9 1905 aaKnown RBP12.07□□□□□ -0.48
LINC01140-210ENST00000590653 KLRK1P26718 216 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 ATP6V1AP38606 617 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 CDR1P51861 262 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 E2F5Q15329 346 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 PTGISQ16647 500 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 KIAA0753Q2KHM9 967 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 CCDC40Q4G0X9 1142 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 CAVIN4Q5BKX8 364 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 MICALCLQ6ZW33 695 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 IQCKQ8N0W5 287 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 GIMAP7Q8NHV1 300 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 MYCBPAPQ8TBZ2 947 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 FAM212AQ96EL1 285 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 ZHX3Q9H4I2 956 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 DCP1AQ9NPI6 582 aaPredicted RBP12.07□□□□□ -0.48
LINC01140-210ENST00000590653 BIN2Q9UBW5 565 aaPredicted RBP12.07□□□□□ -0.48
LINC01140-210ENST00000590653 LRP6O75581 1613 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 KCNK3O14649 394 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 KLRC1P26715 233 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 PRDX5P30044 214 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 SKOR1P84550 965 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 NKX1-1Q15270 411 aaPredicted RBP12.07□□□□□ -0.48
LINC01140-210ENST00000590653 SWT1Q5T5J6 900 aaKnown RBP12.07□□□□□ -0.48
LINC01140-210ENST00000590653 NELFCDQ8IXH7 590 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 UBLCP1Q8WVY7 318 aaPredicted RBP12.07□□□□□ -0.48
LINC01140-210ENST00000590653 TRIM31Q9BZY9 425 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 CHD4Q14839 1912 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 NUP188Q5SRE5 1749 aa12.07□□□□□ -0.48
LINC01140-210ENST00000590653 FRMD3A2A2Y4 597 aa12.06□□□□□ -0.48
LINC01140-210ENST00000590653 TULP1O00294 542 aaPredicted RBP12.06□□□□□ -0.48
LINC01140-210ENST00000590653 TRAF5O00463 557 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms