RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 IL27Q8NEV9 243 aa24.52■■□□□ 1.52
ATG4D-212ENST00000590096 MORC4Q8TE76 937 aa24.52■■□□□ 1.52
ATG4D-212ENST00000590096 BARHL2Q9NY43 387 aa24.52■■□□□ 1.52
ATG4D-212ENST00000590096 ST18O60284 1047 aa24.51■■□□□ 1.51
ATG4D-212ENST00000590096 AKR1A1P14550 325 aa24.51■■□□□ 1.51
ATG4D-212ENST00000590096 EN2P19622 333 aaPredicted RBP24.51■■□□□ 1.51
ATG4D-212ENST00000590096 FCHSD1Q86WN1 690 aa24.51■■□□□ 1.51
ATG4D-212ENST00000590096 LIMCH1Q9UPQ0 1083 aa24.51■■□□□ 1.51
ATG4D-212ENST00000590096 STXBP3O00186 592 aa24.5■■□□□ 1.51
ATG4D-212ENST00000590096 PIK3CDO00329 1044 aa24.5■■□□□ 1.51
ATG4D-212ENST00000590096 EIF2AK2P19525 551 aaKnown RBP24.5■■□□□ 1.51
ATG4D-212ENST00000590096 EEPD1Q7L9B9 569 aa24.5■■□□□ 1.51
ATG4D-212ENST00000590096 CCDC12Q8WUD4 166 aaPredicted RBP24.5■■□□□ 1.51
ATG4D-212ENST00000590096 IWS1Q96ST2 819 aa24.5■■□□□ 1.51
ATG4D-212ENST00000590096 VTA1Q9NP79 307 aa24.5■■□□□ 1.51
ATG4D-212ENST00000590096 PXMP2Q9NR77 195 aa24.5■■□□□ 1.51
ATG4D-212ENST00000590096 FAM184BQ9ULE4 1060 aa24.5■■□□□ 1.51
ATG4D-212ENST00000590096 DDX49Q9Y6V7 483 aaKnown RBP24.5■■□□□ 1.51
ATG4D-212ENST00000590096 LRRC37A2A6NM11 1700 aa24.49■■□□□ 1.51
ATG4D-212ENST00000590096 LARGE1O95461 756 aa24.49■■□□□ 1.51
ATG4D-212ENST00000590096 EDNRBP24530 442 aa24.49■■□□□ 1.51
ATG4D-212ENST00000590096 PKN1Q16512 942 aa24.49■■□□□ 1.51
ATG4D-212ENST00000590096 USP17L6PQ6QN14 398 aa24.49■■□□□ 1.51
ATG4D-212ENST00000590096 FBXO16Q8IX29 292 aaPredicted RBP24.49■■□□□ 1.51
ATG4D-212ENST00000590096 NECAB1Q8N987 351 aa24.49■■□□□ 1.51
ATG4D-212ENST00000590096 GTF3C6Q969F1 213 aa24.49■■□□□ 1.51
ATG4D-212ENST00000590096 CRISPLD2Q9H0B8 497 aa24.49■■□□□ 1.51
ATG4D-212ENST00000590096 GLT8D2Q9H1C3 349 aa24.49■■□□□ 1.51
ATG4D-212ENST00000590096 DEXIO95424 95 aa24.48■■□□□ 1.51
ATG4D-212ENST00000590096 RARBP10826 455 aa24.48■■□□□ 1.51
ATG4D-212ENST00000590096 ADCY7P51828 1080 aa24.48■■□□□ 1.51
ATG4D-212ENST00000590096 CCDC144BQ3MJ40 725 aa24.48■■□□□ 1.51
ATG4D-212ENST00000590096 FRMPD3Q5JV73 1810 aa24.48■■□□□ 1.51
ATG4D-212ENST00000590096 LHX8Q68G74 356 aa24.48■■□□□ 1.51
ATG4D-212ENST00000590096 TYW1BQ6NUM6 668 aa24.48■■□□□ 1.51
ATG4D-212ENST00000590096 SHISA4Q96DD7 197 aa24.48■■□□□ 1.51
ATG4D-212ENST00000590096 ZSCAN31Q96LW9 406 aaPredicted RBP24.48■■□□□ 1.51
ATG4D-212ENST00000590096 KATNBL1Q9H079 304 aa24.48■■□□□ 1.51
ATG4D-212ENST00000590096 RIC8AQ9NPQ8 531 aa24.48■■□□□ 1.51
ATG4D-212ENST00000590096 SMCO2A6NFE2 343 aa24.47■■□□□ 1.51
ATG4D-212ENST00000590096 MEIS2O14770 477 aa24.47■■□□□ 1.51
ATG4D-212ENST00000590096 STXBP2Q15833 593 aa24.47■■□□□ 1.51
ATG4D-212ENST00000590096 ANO1Q5XXA6 986 aa24.47■■□□□ 1.51
ATG4D-212ENST00000590096 TEX2Q8IWB9 1127 aa24.47■■□□□ 1.51
ATG4D-212ENST00000590096 CCDC148Q8NFR7 591 aa24.47■■□□□ 1.51
ATG4D-212ENST00000590096 OGDHLQ9ULD0 1010 aa24.47■■□□□ 1.51
ATG4D-212ENST00000590096 BRCA2P51587 3418 aa24.47■■□□□ 1.51
ATG4D-212ENST00000590096 NR3C2P08235 984 aa24.46■■□□□ 1.51
ATG4D-212ENST00000590096 UBE2SQ16763 222 aa24.46■■□□□ 1.51
ATG4D-212ENST00000590096 PDCD2LQ9BRP1 358 aa24.46■■□□□ 1.51
ATG4D-212ENST00000590096 STK36Q9NRP7 1315 aa24.45■■□□□ 1.5
ATG4D-212ENST00000590096 SPDYE3A6NKU9 549 aa24.45■■□□□ 1.5
ATG4D-212ENST00000590096 PGM5Q15124 567 aa24.45■■□□□ 1.5
ATG4D-212ENST00000590096 ANKLE1Q8NAG6 615 aa24.45■■□□□ 1.5
ATG4D-212ENST00000590096 C6orf50Q9HD87 102 aa24.45■■□□□ 1.5
ATG4D-212ENST00000590096 SH3GLB2Q9NR46 395 aa24.45■■□□□ 1.5
ATG4D-212ENST00000590096 SH2B1Q9NRF2 756 aaPredicted RBP24.45■■□□□ 1.5
ATG4D-212ENST00000590096 ESYT2A0FGR8 921 aa24.44■■□□□ 1.5
ATG4D-212ENST00000590096 MYCLP12524 364 aaPredicted RBP24.44■■□□□ 1.5
ATG4D-212ENST00000590096 GNA11P29992 359 aa24.44■■□□□ 1.5
ATG4D-212ENST00000590096 CCND2P30279 289 aa24.44■■□□□ 1.5
ATG4D-212ENST00000590096 ADCYAP1R1P41586 468 aa24.44■■□□□ 1.5
ATG4D-212ENST00000590096 TNFAIP2Q03169 654 aa24.44■■□□□ 1.5
ATG4D-212ENST00000590096 IQSEC1Q6DN90 963 aa24.44■■□□□ 1.5
ATG4D-212ENST00000590096 TAPT1Q6NXT6 567 aa24.44■■□□□ 1.5
ATG4D-212ENST00000590096 EHMT1Q9H9B1 1298 aa24.44■■□□□ 1.5
ATG4D-212ENST00000590096 XPNPEP3Q9NQH7 507 aa24.44■■□□□ 1.5
ATG4D-212ENST00000590096 PDGFCQ9NRA1 345 aa24.44■■□□□ 1.5
ATG4D-212ENST00000590096 VPS54Q9P1Q0 977 aa24.44■■□□□ 1.5
ATG4D-212ENST00000590096 FRMPD4Q14CM0 1322 aa24.43■■□□□ 1.5
ATG4D-212ENST00000590096 FARP2O94887 1054 aaPredicted RBP24.43■■□□□ 1.5
ATG4D-212ENST00000590096 ARRDC4Q8NCT1 418 aa24.43■■□□□ 1.5
ATG4D-212ENST00000590096 LENG1Q96BZ8 264 aaPredicted RBP24.43■■□□□ 1.5
ATG4D-212ENST00000590096 ZMYND12Q9H0C1 365 aa24.43■■□□□ 1.5
ATG4D-212ENST00000590096 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.42■■□□□ 1.5
ATG4D-212ENST00000590096 DUSP11O75319 330 aaKnown RBP24.42■■□□□ 1.5
ATG4D-212ENST00000590096 EIF3JO75822 258 aaKnown RBP24.42■■□□□ 1.5
ATG4D-212ENST00000590096 CTDNEP1O95476 244 aa24.42■■□□□ 1.5
ATG4D-212ENST00000590096 FOSP01100 380 aaPredicted RBP24.42■■□□□ 1.5
ATG4D-212ENST00000590096 MYCNP04198 464 aaPredicted RBP24.42■■□□□ 1.5
ATG4D-212ENST00000590096 CCDC83Q8IWF9 413 aa24.42■■□□□ 1.5
ATG4D-212ENST00000590096 BICD2Q8TD16 824 aa24.42■■□□□ 1.5
ATG4D-212ENST00000590096 SCFD2Q8WU76 684 aa24.42■■□□□ 1.5
ATG4D-212ENST00000590096 WASF1Q92558 559 aa24.42■■□□□ 1.5
ATG4D-212ENST00000590096 ORC3Q9UBD5 711 aaPredicted RBP24.42■■□□□ 1.5
ATG4D-212ENST00000590096 XBP1P17861 261 aa24.41■■□□□ 1.5
ATG4D-212ENST00000590096 MCM2P49736 904 aa24.41■■□□□ 1.5
ATG4D-212ENST00000590096 NLRP5P59047 1200 aa24.41■■□□□ 1.5
ATG4D-212ENST00000590096 AP3B2Q13367 1082 aa24.41■■□□□ 1.5
ATG4D-212ENST00000590096 SEPT14Q6ZU15 432 aa24.41■■□□□ 1.5
ATG4D-212ENST00000590096 VSIG10LQ86VR7 867 aa24.41■■□□□ 1.5
ATG4D-212ENST00000590096 NSUN7Q8NE18 718 aaKnown RBP24.41■■□□□ 1.5
ATG4D-212ENST00000590096 IL31RAQ8NI17 732 aa24.41■■□□□ 1.5
ATG4D-212ENST00000590096 WDR11Q9BZH6 1224 aa24.41■■□□□ 1.5
ATG4D-212ENST00000590096 SPC25Q9HBM1 224 aa24.41■■□□□ 1.5
ATG4D-212ENST00000590096 PCDHA6Q9UN73 950 aa24.41■■□□□ 1.5
ATG4D-212ENST00000590096 PCDHA8Q9Y5H6 950 aa24.41■■□□□ 1.5
ATG4D-212ENST00000590096 KIAA1217Q5T5P2 1943 aa24.4■■□□□ 1.5
ATG4D-212ENST00000590096 RBM47A0AV96 593 aaKnown RBP24.4■■□□□ 1.5
ATG4D-212ENST00000590096 ADCY6O43306 1168 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms