RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 UHRF1Q96T88 793 aaPredicted RBP16.67■□□□□ 0.26
SAFB2-205ENST00000590000 COL20A1Q9P218 1284 aa16.67■□□□□ 0.26
SAFB2-205ENST00000590000 PCDHA11Q9Y5I1 949 aa16.67■□□□□ 0.26
SAFB2-205ENST00000590000 MTCH2Q9Y6C9 303 aa16.67■□□□□ 0.26
SAFB2-205ENST00000590000 PTPDC1A2A3K4 754 aa16.66■□□□□ 0.26
SAFB2-205ENST00000590000 ZBBXA8MT70 800 aa16.66■□□□□ 0.26
SAFB2-205ENST00000590000 TOP1P11387 765 aaKnown RBP16.66■□□□□ 0.26
SAFB2-205ENST00000590000 ATP2A2P16615 1042 aaKnown RBP16.66■□□□□ 0.26
SAFB2-205ENST00000590000 MRPS5P82675 430 aaKnown RBP16.66■□□□□ 0.26
SAFB2-205ENST00000590000 ZNF543Q08ER8 600 aa16.66■□□□□ 0.26
SAFB2-205ENST00000590000 RRP12Q5JTH9 1297 aaKnown RBP16.66■□□□□ 0.26
SAFB2-205ENST00000590000 MICALL1Q8N3F8 863 aa16.66■□□□□ 0.26
SAFB2-205ENST00000590000 OR6J1Q8NGC5 347 aa16.66■□□□□ 0.26
SAFB2-205ENST00000590000 TCP11L1Q9NUJ3 509 aa16.66■□□□□ 0.26
SAFB2-205ENST00000590000 KIAA1217Q5T5P2 1943 aa16.65■□□□□ 0.26
SAFB2-205ENST00000590000 A6NJR5 290 aa16.65■□□□□ 0.26
SAFB2-205ENST00000590000 ZEB2O60315 1214 aa16.65■□□□□ 0.26
SAFB2-205ENST00000590000 LPXNO60711 386 aa16.65■□□□□ 0.26
SAFB2-205ENST00000590000 IQCF3P0C7M6 154 aa16.65■□□□□ 0.26
SAFB2-205ENST00000590000 PDE4AP27815 886 aa16.65■□□□□ 0.26
SAFB2-205ENST00000590000 TAP1Q03518 808 aa16.65■□□□□ 0.26
SAFB2-205ENST00000590000 CCDC62Q6P9F0 684 aa16.65■□□□□ 0.26
SAFB2-205ENST00000590000 DHX38Q92620 1227 aaKnown RBP16.65■□□□□ 0.26
SAFB2-205ENST00000590000 MTG1Q9BT17 334 aaPredicted RBP16.65■□□□□ 0.26
SAFB2-205ENST00000590000 NEDD4P46934 1319 aa16.65■□□□□ 0.26
SAFB2-205ENST00000590000 LCHNA4D1U4 455 aa16.64■□□□□ 0.25
SAFB2-205ENST00000590000 GOLGA8HP0CJ92 632 aa16.64■□□□□ 0.25
SAFB2-205ENST00000590000 HSPD1P10809 573 aaKnown RBP16.64■□□□□ 0.25
SAFB2-205ENST00000590000 POU3F3P20264 500 aaPredicted RBP16.64■□□□□ 0.25
SAFB2-205ENST00000590000 NMIQ13287 307 aaPredicted RBP16.64■□□□□ 0.25
SAFB2-205ENST00000590000 RNF207Q6ZRF8 634 aa16.64■□□□□ 0.25
SAFB2-205ENST00000590000 RPUSD2Q8IZ73 545 aaKnown RBP16.64■□□□□ 0.25
SAFB2-205ENST00000590000 KAT2BQ92831 832 aa16.64■□□□□ 0.25
SAFB2-205ENST00000590000 KHSRPQ92945 711 aaKnown RBP eCLIP16.64■□□□□ 0.25
SAFB2-205ENST00000590000 POLR3EQ9NVU0 708 aa16.64■□□□□ 0.25
SAFB2-205ENST00000590000 LAMA4Q16363 1823 aa16.63■□□□□ 0.25
SAFB2-205ENST00000590000 FAM47CQ5HY64 1035 aa16.63■□□□□ 0.25
SAFB2-205ENST00000590000 ZKSCAN3Q9BRR0 538 aa16.63■□□□□ 0.25
SAFB2-205ENST00000590000 SEZ6LQ9BYH1 1024 aa16.63■□□□□ 0.25
SAFB2-205ENST00000590000 UBA5Q9GZZ9 404 aa16.63■□□□□ 0.25
SAFB2-205ENST00000590000 MTIF3Q9H2K0 278 aaKnown RBP16.63■□□□□ 0.25
SAFB2-205ENST00000590000 HELLSQ9NRZ9 838 aa16.63■□□□□ 0.25
SAFB2-205ENST00000590000 ADD3Q9UEY8 706 aaKnown RBP16.63■□□□□ 0.25
SAFB2-205ENST00000590000 CPT1AP50416 773 aa16.62■□□□□ 0.25
SAFB2-205ENST00000590000 ARHGAP1Q07960 439 aa16.62■□□□□ 0.25
SAFB2-205ENST00000590000 HIC1Q14526 733 aa16.62■□□□□ 0.25
SAFB2-205ENST00000590000 GDF6Q6KF10 455 aaPredicted RBP16.62■□□□□ 0.25
SAFB2-205ENST00000590000 WNT8BQ93098 351 aa16.62■□□□□ 0.25
SAFB2-205ENST00000590000 TAAR1Q96RJ0 339 aa16.62■□□□□ 0.25
SAFB2-205ENST00000590000 OSBPL3Q9H4L5 887 aa16.62■□□□□ 0.25
SAFB2-205ENST00000590000 TOMM22Q9NS69 142 aa16.62■□□□□ 0.25
SAFB2-205ENST00000590000 WDR19Q8NEZ3 1342 aa16.62■□□□□ 0.25
SAFB2-205ENST00000590000 LOC102724159A0A0B4J2E5 919 aa16.61■□□□□ 0.25
SAFB2-205ENST00000590000 TXNP10599 105 aaKnown RBP16.61■□□□□ 0.25
SAFB2-205ENST00000590000 PPP2R5BQ15173 497 aa16.61■□□□□ 0.25
SAFB2-205ENST00000590000 PWP2Q15269 919 aaKnown RBP16.61■□□□□ 0.25
SAFB2-205ENST00000590000 LY6KQ17RY6 165 aa16.61■□□□□ 0.25
SAFB2-205ENST00000590000 USH1GQ495M9 461 aa16.61■□□□□ 0.25
SAFB2-205ENST00000590000 TMEM67Q5HYA8 995 aa16.61■□□□□ 0.25
SAFB2-205ENST00000590000 PPP4R3BQ5MIZ7 849 aa16.61■□□□□ 0.25
SAFB2-205ENST00000590000 NFRKBQ6P4R8 1299 aa16.61■□□□□ 0.25
SAFB2-205ENST00000590000 TRAF7Q6Q0C0 670 aa16.61■□□□□ 0.25
SAFB2-205ENST00000590000 HERC6Q8IVU3 1022 aa16.61■□□□□ 0.25
SAFB2-205ENST00000590000 AFG1LQ8WV93 481 aa16.61■□□□□ 0.25
SAFB2-205ENST00000590000 MYH7BA7E2Y1 1941 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 MYH6P13533 1939 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 OPLAHO14841 1288 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 PFKMP08237 780 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 SUPT20HL2P0C7V6 817 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 SDSP20132 328 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 DEFB103AP81534 67 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 PDE4DQ08499 809 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 GRB10Q13322 594 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 MCMDC2Q4G0Z9 681 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 SYTL5Q8TDW5 730 aaPredicted RBP16.6■□□□□ 0.25
SAFB2-205ENST00000590000 SCFD2Q8WU76 684 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 ARNTL2Q8WYA1 636 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 EPHX3Q9H6B9 360 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 ZMYM6O95789 1325 aa16.6■□□□□ 0.25
SAFB2-205ENST00000590000 PITPNM1O00562 1244 aa16.59■□□□□ 0.25
SAFB2-205ENST00000590000 TLL1O43897 1013 aa16.59■□□□□ 0.25
SAFB2-205ENST00000590000 NBNO60934 754 aa16.59■□□□□ 0.25
SAFB2-205ENST00000590000 MMP3P08254 477 aa16.59■□□□□ 0.25
SAFB2-205ENST00000590000 MBTPS1Q14703 1052 aa16.59■□□□□ 0.25
SAFB2-205ENST00000590000 DNERQ8NFT8 737 aa16.59■□□□□ 0.25
SAFB2-205ENST00000590000 OSBPL7Q9BZF2 842 aa16.59■□□□□ 0.25
SAFB2-205ENST00000590000 CD320Q9NPF0 282 aa16.59■□□□□ 0.25
SAFB2-205ENST00000590000 CCDC171Q6TFL3 1326 aa16.59■□□□□ 0.25
SAFB2-205ENST00000590000 NKRFO15226 690 aaKnown RBP eCLIP16.58■□□□□ 0.24
SAFB2-205ENST00000590000 CHMP4BP1P59074 171 aa16.58■□□□□ 0.24
SAFB2-205ENST00000590000 WDR5P61964 334 aaKnown RBP16.58■□□□□ 0.24
SAFB2-205ENST00000590000 SLC35G1Q2M3R5 365 aa16.58■□□□□ 0.24
SAFB2-205ENST00000590000 TRIM71Q2Q1W2 868 aaKnown RBP16.58■□□□□ 0.24
SAFB2-205ENST00000590000 SEPT14Q6ZU15 432 aa16.58■□□□□ 0.24
SAFB2-205ENST00000590000 SLC9A7Q96T83 725 aa16.58■□□□□ 0.24
SAFB2-205ENST00000590000 IL25Q9H293 177 aa16.58■□□□□ 0.24
SAFB2-205ENST00000590000 RFC2P35250 354 aa16.57■□□□□ 0.24
SAFB2-205ENST00000590000 ZNF200P98182 395 aaPredicted RBP16.57■□□□□ 0.24
SAFB2-205ENST00000590000 PTPN11Q06124 597 aaPredicted RBP16.57■□□□□ 0.24
SAFB2-205ENST00000590000 CDC37Q16543 378 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms