RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 FAM117BQ6P1L5 589 aa15.16■□□□□ 0.02
PRKCSH-210ENST00000589990 KBTBD3Q8NAB2 608 aa15.16■□□□□ 0.02
PRKCSH-210ENST00000589990 ZBTB40Q9NUA8 1239 aa15.16■□□□□ 0.02
PRKCSH-210ENST00000589990 PTPDC1A2A3K4 754 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 LINC01553A4QN01 128 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 A6NJR5 290 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 RNF113AO15541 343 aaKnown RBP15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 PLA2G6O60733 806 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 NBNO60934 754 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 HMMRO75330 724 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 ICAM1P05362 532 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 CALML3P27482 149 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 NHLH1Q02575 133 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 BFSP2Q13515 415 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 PTGISQ16647 500 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 FBXL18Q96ME1 805 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 ZBED2Q9BTP6 218 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 LMCD1Q9NZU5 365 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 STX8Q9UNK0 236 aa15.15■□□□□ 0.02
PRKCSH-210ENST00000589990 ZNF318Q5VUA4 2279 aa15.14■□□□□ 0.01
PRKCSH-210ENST00000589990 H3BQ06 376 aaPredicted RBP15.14■□□□□ 0.01
PRKCSH-210ENST00000589990 GJB5O95377 273 aa15.14■□□□□ 0.01
PRKCSH-210ENST00000589990 ERVK-21P61565 698 aa15.14■□□□□ 0.01
PRKCSH-210ENST00000589990 PPP2R5BQ15173 497 aa15.14■□□□□ 0.01
PRKCSH-210ENST00000589990 PTCRAQ6ISU1 281 aaPredicted RBP15.14■□□□□ 0.01
PRKCSH-210ENST00000589990 CLEC4DQ8WXI8 215 aa15.14■□□□□ 0.01
PRKCSH-210ENST00000589990 C17orf80Q9BSJ5 609 aa15.14■□□□□ 0.01
PRKCSH-210ENST00000589990 RANBP17Q9H2T7 1088 aaKnown RBP15.14■□□□□ 0.01
PRKCSH-210ENST00000589990 NOD1Q9Y239 953 aa15.14■□□□□ 0.01
PRKCSH-210ENST00000589990 GRXCR2A6NFK2 248 aa15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 PATL2C9JE40 543 aaKnown RBP15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 FOXP2O15409 715 aa15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 CTDSPL2Q05D32 466 aa15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 PPARAQ07869 468 aa15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 CCDC96Q2M329 555 aa15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 USP34Q70CQ2 3546 aa15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 LRRC8DQ7L1W4 858 aa15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 KAT2BQ92831 832 aa15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 WNT8BQ93098 351 aa15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 TGS1Q96RS0 853 aaKnown RBP15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 ZNF287Q9HBT7 754 aa15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 ECHDC1Q9NTX5 307 aa15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 ADD3Q9UEY8 706 aaKnown RBP15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 FRMPD2Q68DX3 1309 aaPredicted RBP15.13■□□□□ 0.01
PRKCSH-210ENST00000589990 TXNP10599 105 aaKnown RBP15.12■□□□□ 0.01
PRKCSH-210ENST00000589990 SELPP16109 830 aa15.12■□□□□ 0.01
PRKCSH-210ENST00000589990 EDNRBP24530 442 aa15.12■□□□□ 0.01
PRKCSH-210ENST00000589990 PTPN11Q06124 597 aaPredicted RBP15.12■□□□□ 0.01
PRKCSH-210ENST00000589990 PDE4BQ07343 736 aa15.12■□□□□ 0.01
PRKCSH-210ENST00000589990 MBTPS1Q14703 1052 aa15.12■□□□□ 0.01
PRKCSH-210ENST00000589990 TRAF7Q6Q0C0 670 aa15.12■□□□□ 0.01
PRKCSH-210ENST00000589990 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.12■□□□□ 0.01
PRKCSH-210ENST00000589990 AFAP1L1Q8TED9 768 aa15.12■□□□□ 0.01
PRKCSH-210ENST00000589990 AFG1LQ8WV93 481 aa15.12■□□□□ 0.01
PRKCSH-210ENST00000589990 PHOX2BQ99453 314 aa15.12■□□□□ 0.01
PRKCSH-210ENST00000589990 RAD9AQ99638 391 aa15.12■□□□□ 0.01
PRKCSH-210ENST00000589990 LRRCC1Q9C099 1032 aa15.12■□□□□ 0.01
PRKCSH-210ENST00000589990 MYO7AQ13402 2215 aa15.11■□□□□ 0.01
PRKCSH-210ENST00000589990 CXCL10P02778 98 aa15.11■□□□□ 0.01
PRKCSH-210ENST00000589990 CKBP12277 381 aa15.11■□□□□ 0.01
PRKCSH-210ENST00000589990 GNAT2P19087 354 aa15.11■□□□□ 0.01
PRKCSH-210ENST00000589990 RPS6P62753 249 aaKnown RBP15.11■□□□□ 0.01
PRKCSH-210ENST00000589990 PDE4DQ08499 809 aa15.11■□□□□ 0.01
PRKCSH-210ENST00000589990 LRRFIP1Q32MZ4 808 aaKnown RBP15.11■□□□□ 0.01
PRKCSH-210ENST00000589990 CNKSR3Q6P9H4 555 aa15.11■□□□□ 0.01
PRKCSH-210ENST00000589990 NEK9Q8TD19 979 aa15.11■□□□□ 0.01
PRKCSH-210ENST00000589990 SCFD2Q8WU76 684 aa15.11■□□□□ 0.01
PRKCSH-210ENST00000589990 GPCPD1Q9NPB8 672 aa15.11■□□□□ 0.01
PRKCSH-210ENST00000589990 POTEB3A0JP26 581 aa15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 TSPY2A6NKD2 308 aa15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 MMP3P08254 477 aa15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 ALADP13716 330 aa15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 ZNF200P98182 395 aaPredicted RBP15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 LY6KQ17RY6 165 aa15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 BRDTQ58F21 947 aaPredicted RBP15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 SYDE2Q5VT97 1194 aa15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 CCDC62Q6P9F0 684 aa15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 POTEBQ6S5H4 581 aa15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 RNF207Q6ZRF8 634 aa15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 HFE2Q6ZVN8 426 aa15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 CAGE1Q8TC20 777 aa15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 NAPBQ9H115 298 aa15.1■□□□□ 0.01
PRKCSH-210ENST00000589990 ATG2AQ2TAZ0 1938 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 NKRFO15226 690 aaKnown RBP eCLIP15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 DCXO43602 365 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 KPNA6O60684 536 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 NOVP48745 357 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 ARHGAP1Q07960 439 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 HIC1Q14526 733 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 CSPP1Q1MSJ5 1256 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 TRIM71Q2Q1W2 868 aaKnown RBP15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 BTNL9Q6UXG8 535 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 CHST3Q7LGC8 479 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 FBXO22Q8NEZ5 403 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 SNX27Q96L92 541 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 OSBPL7Q9BZF2 842 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 HDAC6Q9UBN7 1215 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 RAD50Q92878 1312 aa15.09■□□□□ 0.01
PRKCSH-210ENST00000589990 LOC102724159A0A0B4J2E5 919 aa15.08■□□□□ 0
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