RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 MAP3K21Q5TCX8 1036 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 PPP1R18Q6NYC8 613 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 MAMDC4Q6UXC1 1216 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 SYTL5Q8TDW5 730 aaPredicted RBP24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 PURBQ96QR8 312 aaKnown RBP24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 MPHOSPH6Q99547 160 aaKnown RBP24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 VPS54Q9P1Q0 977 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 LCTP09848 1927 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 ASB14A6NK59 587 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 IGHA2P01877 340 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 CCL5P13501 91 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 HSD17B4P51659 736 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 GHRHRQ02643 423 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 KRT40Q6A162 431 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 DNERQ8NFT8 737 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 CUL5Q93034 780 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 HMX1Q9NP08 348 aaPredicted RBP24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 CNPY2Q9Y2B0 182 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 RPTORQ8N122 1335 aa24.37■■□□□ 1.49
R3HDM4-204ENST00000589428 CCDC85CA6NKD9 419 aa24.37■■□□□ 1.49
R3HDM4-204ENST00000589428 ALDH5A1P51649 535 aaPredicted RBP24.37■■□□□ 1.49
R3HDM4-204ENST00000589428 ARMCX2Q7L311 632 aa24.37■■□□□ 1.49
R3HDM4-204ENST00000589428 TMEM106CQ9BVX2 250 aa24.37■■□□□ 1.49
R3HDM4-204ENST00000589428 RNF208Q9H0X6 261 aa24.37■■□□□ 1.49
R3HDM4-204ENST00000589428 UNC93B1Q9H1C4 597 aa24.37■■□□□ 1.49
R3HDM4-204ENST00000589428 BARHL2Q9NY43 387 aa24.37■■□□□ 1.49
R3HDM4-204ENST00000589428 LOC102724159A0A0B4J2E5 919 aa24.36■■□□□ 1.49
R3HDM4-204ENST00000589428 HOXA13P31271 388 aaPredicted RBP24.36■■□□□ 1.49
R3HDM4-204ENST00000589428 TRIM29Q14134 588 aa24.36■■□□□ 1.49
R3HDM4-204ENST00000589428 PWP2Q15269 919 aaKnown RBP24.36■■□□□ 1.49
R3HDM4-204ENST00000589428 NRBP1Q9UHY1 535 aa24.36■■□□□ 1.49
R3HDM4-204ENST00000589428 STXBP3O00186 592 aa24.35■■□□□ 1.49
R3HDM4-204ENST00000589428 TYW1BQ6NUM6 668 aa24.35■■□□□ 1.49
R3HDM4-204ENST00000589428 CCDC12Q8WUD4 166 aaPredicted RBP24.35■■□□□ 1.49
R3HDM4-204ENST00000589428 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.35■■□□□ 1.491e-6■■■■■ 45.1
R3HDM4-204ENST00000589428 PSTPIP2Q9H939 334 aa24.35■■□□□ 1.49
R3HDM4-204ENST00000589428 COL20A1Q9P218 1284 aa24.35■■□□□ 1.49
R3HDM4-204ENST00000589428 KCNJ14Q9UNX9 436 aa24.35■■□□□ 1.49
R3HDM4-204ENST00000589428 ASTN1O14525 1302 aa24.35■■□□□ 1.49
R3HDM4-204ENST00000589428 B4DLN1 442 aa24.35■■□□□ 1.49
R3HDM4-204ENST00000589428 F13A1P00488 732 aa24.35■■□□□ 1.49
R3HDM4-204ENST00000589428 CYBAP13498 195 aa24.35■■□□□ 1.49
R3HDM4-204ENST00000589428 MRPL12P52815 198 aaKnown RBP24.35■■□□□ 1.49
R3HDM4-204ENST00000589428 FERMT3Q86UX7 667 aa24.35■■□□□ 1.49
R3HDM4-204ENST00000589428 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.35■■□□□ 1.49
R3HDM4-204ENST00000589428 XBP1P17861 261 aa24.34■■□□□ 1.49
R3HDM4-204ENST00000589428 NSUN6Q8TEA1 469 aaKnown RBP24.34■■□□□ 1.49
R3HDM4-204ENST00000589428 RMDN3Q96TC7 470 aa24.34■■□□□ 1.49
R3HDM4-204ENST00000589428 PHF20Q9BVI0 1012 aa24.34■■□□□ 1.49
R3HDM4-204ENST00000589428 MMP1P03956 469 aa24.33■■□□□ 1.49
R3HDM4-204ENST00000589428 CNGA1P29973 690 aa24.33■■□□□ 1.49
R3HDM4-204ENST00000589428 CCND3P30281 292 aaPredicted RBP24.33■■□□□ 1.49
R3HDM4-204ENST00000589428 CCDC148Q8NFR7 591 aa24.33■■□□□ 1.49
R3HDM4-204ENST00000589428 TNPO1Q92973 898 aaKnown RBP24.33■■□□□ 1.49
R3HDM4-204ENST00000589428 TAAR1Q96RJ0 339 aa24.33■■□□□ 1.49
R3HDM4-204ENST00000589428 ABHD16BQ9H3Z7 469 aa24.33■■□□□ 1.49
R3HDM4-204ENST00000589428 SH3GLB2Q9NR46 395 aa24.33■■□□□ 1.49
R3HDM4-204ENST00000589428 ZHX1Q9UKY1 873 aaPredicted RBP24.33■■□□□ 1.49
R3HDM4-204ENST00000589428 PIK3CDO00329 1044 aa24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 SNAI1O95863 264 aaPredicted RBP24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 ADCY7P51828 1080 aa24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 PDE4DQ08499 809 aa24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 PRAMEF19Q5SWL8 479 aa24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 ARHGEF16Q5VV41 709 aa24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 FCHSD1Q86WN1 690 aa24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 GLT8D2Q9H1C3 349 aa24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 PAK6Q9NQU5 681 aaPredicted RBP24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 RESTQ13127 1097 aa24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 NPY5RQ15761 445 aa24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 MCTP1Q6DN14 999 aa24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 USP17L6PQ6QN14 398 aa24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 TEX2Q8IWB9 1127 aa24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 MCM3APO60318 1980 aa24.32■■□□□ 1.48
R3HDM4-204ENST00000589428 SMCO2A6NFE2 343 aa24.31■■□□□ 1.48
R3HDM4-204ENST00000589428 MEIS2O14770 477 aa24.31■■□□□ 1.48
R3HDM4-204ENST00000589428 TRPV1Q8NER1 839 aa24.31■■□□□ 1.48
R3HDM4-204ENST00000589428 MORC4Q8TE76 937 aa24.31■■□□□ 1.48
R3HDM4-204ENST00000589428 DEFB118Q96PH6 123 aa24.31■■□□□ 1.48
R3HDM4-204ENST00000589428 RIC8AQ9NPQ8 531 aa24.31■■□□□ 1.48
R3HDM4-204ENST00000589428 PXMP2Q9NR77 195 aa24.31■■□□□ 1.48
R3HDM4-204ENST00000589428 KIF28PB7ZC32 967 aa24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 GJB1P08034 283 aa24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 EIF2AK2P19525 551 aaKnown RBP24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 ACVR2BQ13705 512 aa24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 IWS1Q96ST2 819 aa24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 DDX49Q9Y6V7 483 aaKnown RBP24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 LRRC37A2A6NM11 1700 aa24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 ESYT2A0FGR8 921 aa24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 SEPT4O43236 478 aa24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 MSCO60682 206 aa24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 ZNF865P0CJ78 1059 aaPredicted RBP24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 EDNRBP24530 442 aa24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 UBE2SQ16763 222 aa24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 DIS3L2Q8IYB7 885 aaKnown RBP24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 FAM177A1Q8N128 213 aaPredicted RBP24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 C6orf50Q9HD87 102 aa24.3■■□□□ 1.48
R3HDM4-204ENST00000589428 SPDYE3A6NKU9 549 aa24.29■■□□□ 1.48
R3HDM4-204ENST00000589428 NLRP5P59047 1200 aa24.29■■□□□ 1.48
R3HDM4-204ENST00000589428 EEPD1Q7L9B9 569 aa24.29■■□□□ 1.48
R3HDM4-204ENST00000589428 OXER1Q8TDS5 423 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms