RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 TTF2Q9UNY4 1162 aaKnown RBP7.11□□□□□ -1.27
AP000547.3-204ENST00000588548 HEY1Q9Y5J3 304 aa7.11□□□□□ -1.27
AP000547.3-204ENST00000588548 NEURL4Q96JN8 1562 aa7.11□□□□□ -1.27
AP000547.3-204ENST00000588548 CEMIPQ8WUJ3 1361 aa7.11□□□□□ -1.27
AP000547.3-204ENST00000588548 BCL9O00512 1426 aa7.11□□□□□ -1.27
AP000547.3-204ENST00000588548 SOWAHDA6NJG2 315 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 ZNF233A6NK53 670 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 MTRF1O75570 445 aaKnown RBP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 PAEPP09466 180 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 MSL3P1P0C860 447 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 DRD4P21917 467 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 HALP42357 657 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 MATR3P43243 847 aaKnown RBP eCLIP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 SERPINB4P48594 390 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 KCNJ2P63252 427 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 CKAP4Q07065 602 aaKnown RBP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 PPIDQ08752 370 aaKnown RBP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 CNGA3Q16281 694 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 CCDC153Q494R4 210 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 SYDE2Q5VT97 1194 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 LARP1Q6PKG0 1096 aaKnown RBP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 ZNF804AQ7Z570 1209 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 FMR1NBQ8N0W7 255 aaPredicted RBP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 TTC30BQ8N4P2 665 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 GBP5Q96PP8 586 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 NAA15Q9BXJ9 866 aaKnown RBP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 SEZ6LQ9BYH1 1024 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 MIS12Q9H081 205 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 TAF1DQ9H5J8 278 aaPredicted RBP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 ETNK2Q9NVF9 386 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 ITIH6Q6UXX5 1313 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 CDK12Q9NYV4 1490 aaPredicted RBP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 KIF13AQ9H1H9 1805 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 UNCXA6NJT0 531 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 HIP1RO75146 1068 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 STK10O94804 968 aaKnown RBP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 KRT14P02533 472 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 S100A1P23297 94 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 CCNFP41002 786 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 CTAG1AP78358 180 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 LMNB2Q03252 620 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 EIF2B5Q13144 721 aaKnown RBP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 SAFBQ15424 915 aaKnown RBP eCLIP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 ZFYVE27Q5T4F4 411 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 SPECC1LQ69YQ0 1117 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 CCSAPQ6IQ19 270 aaPredicted RBP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 KLC3Q6P597 504 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 CACNA2D4Q7Z3S7 1137 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 TTC39CQ8N584 583 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 NECAB1Q8N987 351 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 IFT81Q8WYA0 676 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 ABTB1Q969K4 478 aaPredicted RBP7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 CTAGE1Q96RT6 745 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 IL25Q9H293 177 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 ARHGEF38Q9NXL2 777 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 PDP2Q9P2J9 529 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 SLC12A6Q9UHW9 1150 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 SUGT1Q9Y2Z0 365 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 NEDD4P46934 1319 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 NSD3Q9BZ95 1437 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 DIP2BQ9P265 1576 aa7.1□□□□□ -1.27
AP000547.3-204ENST00000588548 TBKBP1A7MCY6 615 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 F8W031 263 aaPredicted RBP7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 CETN3O15182 167 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 POTEIP0CG38 1075 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 PYGMP11217 842 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 SCG2P13521 617 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 CPA1P15085 419 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 BDNFP23560 247 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 ADD1P35611 737 aaKnown RBP7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 NCALDP61601 193 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 LACTBP83111 547 aaPredicted RBP7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 ATP11AP98196 1134 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 GUCY2DQ02846 1103 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 PAK2Q13177 524 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 PTPN21Q16825 1174 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 CCDC152Q4G0S7 254 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 CEP85Q6P2H3 762 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 NEK10Q6ZWH5 1172 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 C11orf74Q86VG3 221 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 ZNF713Q8N859 430 aaPredicted RBP7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 FSIP1Q8NA03 581 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 CCDC197Q8NCU1 140 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 CCDC85AQ96PX6 553 aaPredicted RBP7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 TUBGCP5Q96RT8 1024 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 CCT7Q99832 543 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 SDF4Q9BRK5 362 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 CABP2Q9NPB3 220 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 ATAD3AQ9NVI7 634 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 AGAP1Q9UPQ3 857 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 KIAA0232Q92628 1395 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 ABCC6O95255 1503 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 MYH8P13535 1937 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 CCDC162PA2VCL2 907 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 A8MUI8 341 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 PRPF3O43395 683 aaKnown RBP7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 GBP1P32455 592 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 COPB2P35606 906 aa7.09□□□□□ -1.27
AP000547.3-204ENST00000588548 CACNA2D1P54289 1103 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms