RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 GPHNQ9NQX3 736 aaPredicted RBP11.53□□□□□ -0.56
CNN1-207ENST00000588468 PDLIM7Q9NR12 457 aa11.53□□□□□ -0.56
CNN1-207ENST00000588468 SEC63Q9UGP8 760 aaKnown RBP11.53□□□□□ -0.56
CNN1-207ENST00000588468 SLC12A7Q9Y666 1083 aa11.53□□□□□ -0.56
CNN1-207ENST00000588468 DDX49Q9Y6V7 483 aaKnown RBP11.53□□□□□ -0.56
CNN1-207ENST00000588468 A0A0U1RQG5 324 aaPredicted RBP11.52□□□□□ -0.57
CNN1-207ENST00000588468 CFBP00751 764 aa11.52□□□□□ -0.57
CNN1-207ENST00000588468 ASGR1P07306 291 aa11.52□□□□□ -0.57
CNN1-207ENST00000588468 CLTBP09497 229 aa11.52□□□□□ -0.57
CNN1-207ENST00000588468 CPT1AP50416 773 aa11.52□□□□□ -0.57
CNN1-207ENST00000588468 FXR1P51114 621 aaKnown RBP eCLIP11.52□□□□□ -0.57
CNN1-207ENST00000588468 RCAN1P53805 252 aa11.52□□□□□ -0.57
CNN1-207ENST00000588468 TLE2Q04725 743 aa11.52□□□□□ -0.57
CNN1-207ENST00000588468 DHX32Q7L7V1 743 aaKnown RBP11.52□□□□□ -0.57
CNN1-207ENST00000588468 KCNB2Q92953 911 aa11.52□□□□□ -0.57
CNN1-207ENST00000588468 MYL10Q9BUA6 226 aa11.52□□□□□ -0.57
CNN1-207ENST00000588468 WDR11Q9BZH6 1224 aa11.52□□□□□ -0.57
CNN1-207ENST00000588468 PXMP2Q9NR77 195 aa11.52□□□□□ -0.57
CNN1-207ENST00000588468 PDGFCQ9NRA1 345 aa11.52□□□□□ -0.57
CNN1-207ENST00000588468 COL20A1Q9P218 1284 aa11.52□□□□□ -0.57
CNN1-207ENST00000588468 DCDC2CA8MYV0 355 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 KIAA0355O15063 1070 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 HSPA4P34932 840 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 EXOSC10Q01780 885 aaKnown RBP11.51□□□□□ -0.57
CNN1-207ENST00000588468 COL9A3Q14050 684 aaPredicted RBP11.51□□□□□ -0.57
CNN1-207ENST00000588468 TTLL4Q14679 1199 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 STXBP2Q15833 593 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 BRDTQ58F21 947 aaPredicted RBP11.51□□□□□ -0.57
CNN1-207ENST00000588468 ARHGEF16Q5VV41 709 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 APOA5Q6Q788 366 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 SYNE3Q6ZMZ3 975 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 MICU3Q86XE3 530 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 RASEFQ8IZ41 740 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 TBC1D5Q92609 795 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 TAAR1Q96RJ0 339 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 UBE2OQ9C0C9 1292 aaKnown RBP11.51□□□□□ -0.57
CNN1-207ENST00000588468 PRDM5Q9NQX1 630 aaPredicted RBP11.51□□□□□ -0.57
CNN1-207ENST00000588468 POLR3EQ9NVU0 708 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 RBM28Q9NW13 759 aaKnown RBP11.51□□□□□ -0.57
CNN1-207ENST00000588468 FRMPD4Q14CM0 1322 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 TANC1Q9C0D5 1861 aa11.51□□□□□ -0.57
CNN1-207ENST00000588468 GCOM1H8Y6P7 765 aaPredicted RBP11.5□□□□□ -0.57
CNN1-207ENST00000588468 ARVCFO00192 962 aa11.5□□□□□ -0.57
CNN1-207ENST00000588468 DYNC1LI2O43237 492 aaPredicted RBP11.5□□□□□ -0.57
CNN1-207ENST00000588468 PQBP1O60828 265 aaKnown RBP11.5□□□□□ -0.57
CNN1-207ENST00000588468 PLEKHA8P1O95397 391 aa11.5□□□□□ -0.57
CNN1-207ENST00000588468 POLR2MP0CAP2 368 aa11.5□□□□□ -0.57
CNN1-207ENST00000588468 BEX3Q00994 111 aa11.5□□□□□ -0.57
CNN1-207ENST00000588468 TMTC3Q6ZXV5 915 aa11.5□□□□□ -0.57
CNN1-207ENST00000588468 TEX2Q8IWB9 1127 aa11.5□□□□□ -0.57
CNN1-207ENST00000588468 TDHQ8IZJ6 230 aa11.5□□□□□ -0.57
CNN1-207ENST00000588468 OR6J1Q8NGC5 347 aa11.5□□□□□ -0.57
CNN1-207ENST00000588468 LRRC2Q9BYS8 371 aa11.5□□□□□ -0.57
CNN1-207ENST00000588468 NID2Q14112 1375 aa11.5□□□□□ -0.57
CNN1-207ENST00000588468 SZT2Q5T011 3432 aa11.5□□□□□ -0.57
CNN1-207ENST00000588468 TLR3O15455 904 aaKnown RBP11.49□□□□□ -0.57
CNN1-207ENST00000588468 ZBTB43O43298 467 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 KPNA6O60684 536 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 EIF3JO75822 258 aaKnown RBP11.49□□□□□ -0.57
CNN1-207ENST00000588468 NR3C2P08235 984 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 TXNP10599 105 aaKnown RBP11.49□□□□□ -0.57
CNN1-207ENST00000588468 EIF2AK2P19525 551 aaKnown RBP11.49□□□□□ -0.57
CNN1-207ENST00000588468 RXRAP19793 462 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 CDK7P50613 346 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 IRX5P78411 483 aaPredicted RBP11.49□□□□□ -0.57
CNN1-207ENST00000588468 MDM2Q00987 491 aaPredicted RBP11.49□□□□□ -0.57
CNN1-207ENST00000588468 RTN1Q16799 776 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 ADCK5Q3MIX3 580 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 CCDC62Q6P9F0 684 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 CXCL17Q6UXB2 119 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 SRBD1Q8N5C6 995 aaKnown RBP11.49□□□□□ -0.57
CNN1-207ENST00000588468 FANCBQ8NB91 859 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 SLC43A3Q8NBI5 491 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 VTI1AQ96AJ9 217 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 PDCD2LQ9BRP1 358 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 TBX21Q9UL17 535 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 CNTNAP5Q8WYK1 1306 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 DOCK5Q9H7D0 1870 aa11.49□□□□□ -0.57
CNN1-207ENST00000588468 A6NJR5 290 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 PIK3CDO00329 1044 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 STAM2O75886 525 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 GH1P01241 217 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 CCND2P30279 289 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 HOXA13P31271 388 aaPredicted RBP11.48□□□□□ -0.57
CNN1-207ENST00000588468 FAAP100Q0VG06 881 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 PGM5Q15124 567 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 LRIT3Q3SXY7 679 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 TMEM63BQ5T3F8 832 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 KCNV1Q6PIU1 500 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 BLOC1S2Q6QNY1 142 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 FAM126BQ8IXS8 530 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 FBXL16Q8N461 479 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 CUL5Q93034 780 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 EMID1Q96A84 441 aaPredicted RBP11.48□□□□□ -0.57
CNN1-207ENST00000588468 JAKMIP1Q96N16 626 aaKnown RBP11.48□□□□□ -0.57
CNN1-207ENST00000588468 MTG1Q9BT17 334 aaPredicted RBP11.48□□□□□ -0.57
CNN1-207ENST00000588468 TMEM39AQ9NV64 488 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 SNX14Q9Y5W7 946 aa11.48□□□□□ -0.57
CNN1-207ENST00000588468 KLF18A0A0U1RQI7 1052 aa11.47□□□□□ -0.57
CNN1-207ENST00000588468 TRIM43BA6NCK2 446 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms