RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 CCDC82Q8N4S0 544 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 ZNF713Q8N859 430 aaPredicted RBP11.66□□□□□ -0.54
TPM4-207ENST00000588032 PCSK9Q8NBP7 692 aaKnown RBP11.66□□□□□ -0.54
TPM4-207ENST00000588032 KLHDC9Q8NEP7 349 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 SCFD2Q8WU76 684 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 ZNF274Q96GC6 653 aaPredicted RBP11.66□□□□□ -0.54
TPM4-207ENST00000588032 SENP6Q9GZR1 1112 aaPredicted RBP11.66□□□□□ -0.54
TPM4-207ENST00000588032 AP5M1Q9H0R1 490 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 UPF3AQ9H1J1 476 aaKnown RBP11.66□□□□□ -0.54
TPM4-207ENST00000588032 ALDH8A1Q9H2A2 487 aaPredicted RBP11.66□□□□□ -0.54
TPM4-207ENST00000588032 PXMP2Q9NR77 195 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 FAM217BQ9NTX9 383 aaPredicted RBP11.66□□□□□ -0.54
TPM4-207ENST00000588032 PDRG1Q9NUG6 133 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 COL20A1Q9P218 1284 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 PHF24Q9UPV7 400 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 GNEQ9Y223 722 aaKnown RBP11.66□□□□□ -0.54
TPM4-207ENST00000588032 V9GY48 417 aaPredicted RBP11.66□□□□□ -0.54
TPM4-207ENST00000588032 NID2Q14112 1375 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 MOXD2PA6NHM9 499 aa11.65□□□□□ -0.54
TPM4-207ENST00000588032 EIF3JO75822 258 aaKnown RBP11.65□□□□□ -0.54
TPM4-207ENST00000588032 NR3C2P08235 984 aa11.65□□□□□ -0.54
TPM4-207ENST00000588032 PDIA3P30101 505 aaKnown RBP11.65□□□□□ -0.54
TPM4-207ENST00000588032 CDC27P30260 824 aa11.65□□□□□ -0.54
TPM4-207ENST00000588032 ADCYAP1R1P41586 468 aa11.65□□□□□ -0.54
TPM4-207ENST00000588032 FUT2Q10981 343 aa11.65□□□□□ -0.54
TPM4-207ENST00000588032 DUSP28Q4G0W2 176 aa11.65□□□□□ -0.54
TPM4-207ENST00000588032 C1orf53Q5VUE5 145 aa11.65□□□□□ -0.54
TPM4-207ENST00000588032 SMARCC2Q8TAQ2 1214 aa11.65□□□□□ -0.54
TPM4-207ENST00000588032 WDR11Q9BZH6 1224 aa11.65□□□□□ -0.54
TPM4-207ENST00000588032 PSTPIP2Q9H939 334 aa11.65□□□□□ -0.54
TPM4-207ENST00000588032 PDGFCQ9NRA1 345 aa11.65□□□□□ -0.54
TPM4-207ENST00000588032 SMCHD1A6NHR9 2005 aa11.65□□□□□ -0.54
TPM4-207ENST00000588032 CNTNAP5Q8WYK1 1306 aa11.64□□□□□ -0.55
TPM4-207ENST00000588032 SYNRGQ9UMZ2 1314 aa11.64□□□□□ -0.55
TPM4-207ENST00000588032 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.64□□□□□ -0.55
TPM4-207ENST00000588032 ZEB2O60315 1214 aa11.64□□□□□ -0.55
TPM4-207ENST00000588032 STAM2O75886 525 aa11.64□□□□□ -0.55
TPM4-207ENST00000588032 C6orf222P0C671 652 aaPredicted RBP11.64□□□□□ -0.55
TPM4-207ENST00000588032 SMPD1P17405 629 aa11.64□□□□□ -0.55
TPM4-207ENST00000588032 HOXA13P31271 388 aaPredicted RBP11.64□□□□□ -0.55
TPM4-207ENST00000588032 ADD1P35611 737 aaKnown RBP11.64□□□□□ -0.55
TPM4-207ENST00000588032 TOB2Q14106 344 aaPredicted RBP11.64□□□□□ -0.55
TPM4-207ENST00000588032 TTLL4Q14679 1199 aa11.64□□□□□ -0.55
TPM4-207ENST00000588032 ANKRD1Q15327 319 aa11.64□□□□□ -0.55
TPM4-207ENST00000588032 GNASQ5JWF2 1037 aa11.64□□□□□ -0.55
TPM4-207ENST00000588032 CCSAPQ6IQ19 270 aaPredicted RBP11.64□□□□□ -0.55
TPM4-207ENST00000588032 KCNV1Q6PIU1 500 aa11.64□□□□□ -0.55
TPM4-207ENST00000588032 SLC39A5Q6ZMH5 540 aa11.64□□□□□ -0.55
TPM4-207ENST00000588032 TLK2Q86UE8 772 aa11.64□□□□□ -0.55
TPM4-207ENST00000588032 PDCD2LQ9BRP1 358 aa11.64□□□□□ -0.55
TPM4-207ENST00000588032 UPF3BQ9BZI7 483 aaKnown RBP11.64□□□□□ -0.55
TPM4-207ENST00000588032 GLT8D2Q9H1C3 349 aa11.64□□□□□ -0.55
TPM4-207ENST00000588032 DYNC1LI2O43237 492 aaPredicted RBP11.63□□□□□ -0.55
TPM4-207ENST00000588032 ADCY6O43306 1168 aa11.63□□□□□ -0.55
TPM4-207ENST00000588032 PRPF3O43395 683 aaKnown RBP11.63□□□□□ -0.55
TPM4-207ENST00000588032 TXNP10599 105 aaKnown RBP11.63□□□□□ -0.55
TPM4-207ENST00000588032 TGFB3P10600 412 aa11.63□□□□□ -0.55
TPM4-207ENST00000588032 EIF2AK2P19525 551 aaKnown RBP11.63□□□□□ -0.55
TPM4-207ENST00000588032 ACLYP53396 1101 aa11.63□□□□□ -0.55
TPM4-207ENST00000588032 AKAP17AQ02040 695 aaKnown RBP11.63□□□□□ -0.55
TPM4-207ENST00000588032 PGM5Q15124 567 aa11.63□□□□□ -0.55
TPM4-207ENST00000588032 KCNA10Q16322 511 aa11.63□□□□□ -0.55
TPM4-207ENST00000588032 BRDTQ58F21 947 aaPredicted RBP11.63□□□□□ -0.55
TPM4-207ENST00000588032 PPP1R18Q6NYC8 613 aa11.63□□□□□ -0.55
TPM4-207ENST00000588032 XRRA1Q6P2D8 792 aa11.63□□□□□ -0.55
TPM4-207ENST00000588032 CPLX2Q6PUV4 134 aaKnown RBP11.63□□□□□ -0.55
TPM4-207ENST00000588032 HEATR3Q7Z4Q2 680 aa11.63□□□□□ -0.55
TPM4-207ENST00000588032 VSIG10LQ86VR7 867 aa11.63□□□□□ -0.55
TPM4-207ENST00000588032 FCHSD1Q86WN1 690 aa11.63□□□□□ -0.55
TPM4-207ENST00000588032 LENG1Q96BZ8 264 aaPredicted RBP11.63□□□□□ -0.55
TPM4-207ENST00000588032 GLT1D1Q96MS3 346 aa11.63□□□□□ -0.55
TPM4-207ENST00000588032 RNF26Q9BY78 433 aaPredicted RBP11.63□□□□□ -0.55
TPM4-207ENST00000588032 SEZ6LQ9BYH1 1024 aa11.63□□□□□ -0.55
TPM4-207ENST00000588032 DDX49Q9Y6V7 483 aaKnown RBP11.63□□□□□ -0.55
TPM4-207ENST00000588032 ELP1O95163 1332 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 MYH6P13533 1939 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 hCG_1642624A0A1W2PR95 340 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 MEIS2O14770 477 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 KPNA6O60684 536 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 CABYRO75952 493 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 SEC24BO95487 1268 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 MYCLP12524 364 aaPredicted RBP11.62□□□□□ -0.55
TPM4-207ENST00000588032 IFNAR1P17181 557 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 CCND2P30279 289 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 NAPAP54920 295 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 SNX17Q15036 470 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 FSCN1Q16658 493 aaKnown RBP11.62□□□□□ -0.55
TPM4-207ENST00000588032 PFKFB3Q16875 520 aaPredicted RBP11.62□□□□□ -0.55
TPM4-207ENST00000588032 LRRC26Q2I0M4 334 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 C8orf34Q49A92 452 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 CCDC62Q6P9F0 684 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 SEPT14Q6ZU15 432 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 CCDC12Q8WUD4 166 aaPredicted RBP11.62□□□□□ -0.55
TPM4-207ENST00000588032 RIC8AQ9NPQ8 531 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 BARHL2Q9NY43 387 aa11.62□□□□□ -0.55
TPM4-207ENST00000588032 FRMPD4Q14CM0 1322 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 FRMPD3Q5JV73 1810 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 LCTP09848 1927 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 A0A1W2PQ45 241 aaPredicted RBP11.61□□□□□ -0.55
TPM4-207ENST00000588032 A0A1W2PQY0 241 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms