RNA–Protein interactions for RNA: ENST00000587819.5

CELF4-208, Transcript of CUGBP Elav-like family member 4, human

TSL 4

Gene CELF4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-208	ENST00000587819	ABCB11	O95342	1321 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	PRUNE2	Q8WUY3	3088 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819		A6NJR5	290 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	ZBBX	A8MT70	800 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	PFKM	P08237	780 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	CYP2C9	P11712	490 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	NBPF20	Q3BBV1	942 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	ASPRV1	Q53RT3	343 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	MCF2L2	Q86YR7	1114 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	ADGRF4	Q8IZF3	695 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	ANKS1A	Q92625	1134 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	SCLY	Q96I15	445 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	DSCC1	Q9BVC3	393 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	NKX2-4	Q9H2Z4	354 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	PRDM12	Q9H4Q4	367 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	SLC28A3	Q9HAS3	691 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819	CTNNA3	Q9UI47	895 aa		13.47	□□□□□ -0.25
CELF4-208	ENST00000587819		B4E1Z4	1266 aa		13.46	□□□□□ -0.25
CELF4-208	ENST00000587819	DHX16	O60231	1041 aa	Known RBP	13.46	□□□□□ -0.25
CELF4-208	ENST00000587819	PARP1	P09874	1014 aa	Known RBP	13.46	□□□□□ -0.25
CELF4-208	ENST00000587819	PTPN11	Q06124	597 aa	Predicted RBP	13.46	□□□□□ -0.25
CELF4-208	ENST00000587819	NFRKB	Q6P4R8	1299 aa		13.46	□□□□□ -0.25
CELF4-208	ENST00000587819	ENAH	Q8N8S7	591 aa	Predicted RBP	13.46	□□□□□ -0.25
CELF4-208	ENST00000587819	USP38	Q8NB14	1042 aa		13.46	□□□□□ -0.25
CELF4-208	ENST00000587819	NSUN6	Q8TEA1	469 aa	Known RBP	13.46	□□□□□ -0.25
CELF4-208	ENST00000587819	PPM1E	Q8WY54	764 aa		13.46	□□□□□ -0.25
CELF4-208	ENST00000587819	COPS5	Q92905	334 aa		13.46	□□□□□ -0.25
CELF4-208	ENST00000587819	KRT23	Q9C075	422 aa		13.46	□□□□□ -0.25
CELF4-208	ENST00000587819	CNNM2	Q9H8M5	875 aa		13.46	□□□□□ -0.25
CELF4-208	ENST00000587819	ZSWIM5	Q9P217	1185 aa		13.46	□□□□□ -0.25
CELF4-208	ENST00000587819	LCT	P09848	1927 aa		13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	ACTN1	P12814	892 aa		13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	ATP2A2	P16615	1042 aa	Known RBP	13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	STXBP2	Q15833	593 aa		13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	SEPT14	Q6ZU15	432 aa		13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	RETREG2	Q8NC44	543 aa		13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	EXOC6	Q8TAG9	804 aa		13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	TAAR1	Q96RJ0	339 aa		13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	IWS1	Q96ST2	819 aa		13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	UBAC1	Q9BSL1	405 aa		13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	VAT1L	Q9HCJ6	419 aa		13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	NOD1	Q9Y239	953 aa		13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	YBX2	Q9Y2T7	364 aa	Known RBP	13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	MRPL11	Q9Y3B7	192 aa	Known RBP	13.45	□□□□□ -0.26
CELF4-208	ENST00000587819	PITPNM1	O00562	1244 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	ARIH2	O95376	493 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	GH1	P01241	217 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	IGFBP4	P22692	258 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	RFC2	P35250	354 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	RABGGTB	P53611	331 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	CHMP4BP1	P59074	171 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	BFSP2	Q13515	415 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	QRICH1	Q2TAL8	776 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	TJAP1	Q5JTD0	557 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	IFIT1B	Q5T764	474 aa	Known RBP	13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	ARHGEF16	Q5VV41	709 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	PPP2R2D	Q66LE6	453 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	DEFB128	Q7Z7B8	93 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	FBXO11	Q86XK2	927 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	TBC1D5	Q92609	795 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	RMDN3	Q96TC7	470 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	JMJD4	Q9H9V9	463 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	PCDHA11	Q9Y5I1	949 aa		13.44	□□□□□ -0.26
CELF4-208	ENST00000587819	IQCF3	P0C7M6	154 aa		13.43	□□□□□ -0.26
CELF4-208	ENST00000587819	LY6K	Q17RY6	165 aa		13.43	□□□□□ -0.26
CELF4-208	ENST00000587819	CCDC62	Q6P9F0	684 aa		13.43	□□□□□ -0.26
CELF4-208	ENST00000587819	PPP1R13L	Q8WUF5	828 aa		13.43	□□□□□ -0.26
CELF4-208	ENST00000587819	AFG1L	Q8WV93	481 aa		13.43	□□□□□ -0.26
CELF4-208	ENST00000587819	VWCE	Q96DN2	955 aa		13.43	□□□□□ -0.26
CELF4-208	ENST00000587819	AMN	Q9BXJ7	453 aa		13.43	□□□□□ -0.26
CELF4-208	ENST00000587819	COL20A1	Q9P218	1284 aa		13.43	□□□□□ -0.26
CELF4-208	ENST00000587819	CUL9	Q8IWT3	2517 aa		13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	EIF3J	O75822	258 aa	Known RBP	13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	CFB	P00751	764 aa		13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	MMP3	P08254	477 aa		13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	CAST	P20810	708 aa	Known RBP	13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	TRDN	Q13061	729 aa		13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	ADGRE1	Q14246	886 aa		13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	CCDC85B	Q15834	202 aa	Predicted RBP	13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	PTGIS	Q16647	500 aa		13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	TMEM67	Q5HYA8	995 aa		13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	CHST3	Q7LGC8	479 aa		13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	CCDC155	Q8N6L0	562 aa		13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
CELF4-208	ENST00000587819	MYOG	P15173	224 aa		13.41	□□□□□ -0.26
CELF4-208	ENST00000587819	EIF2AK2	P19525	551 aa	Known RBP	13.41	□□□□□ -0.26
CELF4-208	ENST00000587819	ARHGAP1	Q07960	439 aa		13.41	□□□□□ -0.26
CELF4-208	ENST00000587819	DGKD	Q16760	1214 aa		13.41	□□□□□ -0.26
CELF4-208	ENST00000587819	STAG2	Q8N3U4	1231 aa		13.41	□□□□□ -0.26
CELF4-208	ENST00000587819	CAGE1	Q8TC20	777 aa		13.41	□□□□□ -0.26
CELF4-208	ENST00000587819	PHOSPHO2	Q8TCD6	241 aa		13.41	□□□□□ -0.26
CELF4-208	ENST00000587819	SLC9A7	Q96T83	725 aa		13.41	□□□□□ -0.26
CELF4-208	ENST00000587819	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.41	□□□□□ -0.26
CELF4-208	ENST00000587819	PRDM6	Q9NQX0	595 aa		13.41	□□□□□ -0.26
CELF4-208	ENST00000587819	PXMP2	Q9NR77	195 aa		13.41	□□□□□ -0.26
CELF4-208	ENST00000587819	THEG	Q9P2T0	379 aa		13.41	□□□□□ -0.26
CELF4-208	ENST00000587819	DDX41	Q9UJV9	622 aa	Known RBP	13.41	□□□□□ -0.26
CELF4-208	ENST00000587819	MRVI1	Q9Y6F6	885 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms