RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 AOPEPQ8N6M6 819 aa22.39■■□□□ 1.18
TRIM47-204ENST00000587339 MBOAT7Q96N66 472 aa22.39■■□□□ 1.18
TRIM47-204ENST00000587339 CTDP1Q9Y5B0 961 aaPredicted RBP22.39■■□□□ 1.18
TRIM47-204ENST00000587339 STAMQ92783 540 aa22.39■■□□□ 1.17
TRIM47-204ENST00000587339 PCDHA12Q9UN75 941 aa22.39■■□□□ 1.17
TRIM47-204ENST00000587339 AFG3L2Q9Y4W6 797 aa22.39■■□□□ 1.17
TRIM47-204ENST00000587339 SMCHD1A6NHR9 2005 aa22.38■■□□□ 1.17
TRIM47-204ENST00000587339 AP5Z1O43299 807 aa22.38■■□□□ 1.17
TRIM47-204ENST00000587339 FDX1P10109 184 aa22.38■■□□□ 1.17
TRIM47-204ENST00000587339 DPYDQ12882 1025 aa22.38■■□□□ 1.17
TRIM47-204ENST00000587339 NAALADL2Q58DX5 795 aa22.38■■□□□ 1.17
TRIM47-204ENST00000587339 GSDMAQ96QA5 445 aa22.38■■□□□ 1.17
TRIM47-204ENST00000587339 TMOD4Q9NZQ9 345 aa22.38■■□□□ 1.17
TRIM47-204ENST00000587339 CSADQ9Y600 493 aa22.38■■□□□ 1.17
TRIM47-204ENST00000587339 SNCAIPQ9Y6H5 919 aa22.38■■□□□ 1.17
TRIM47-204ENST00000587339 IQCA1LA6NCM1 817 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 ZBED4O75132 1171 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 BMP6P22004 513 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 CASP1P29466 404 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 NF2P35240 595 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 CALML4Q96GE6 196 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 PLIN2Q99541 437 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 RAVER2Q9HCJ3 691 aaKnown RBP22.37■■□□□ 1.17
TRIM47-204ENST00000587339 KCNMB3Q9NPA1 279 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 PNMA2Q9UL42 364 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 POTEMA6NI47 508 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 IREB2P48200 963 aaKnown RBP22.37■■□□□ 1.17
TRIM47-204ENST00000587339 MORC3Q14149 939 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 Q4G0T1 1027 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 PRR16Q569H4 304 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 RBM46Q8TBY0 533 aaKnown RBP22.37■■□□□ 1.17
TRIM47-204ENST00000587339 MTRQ99707 1265 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 MMTAG2Q9BU76 263 aaKnown RBP22.37■■□□□ 1.17
TRIM47-204ENST00000587339 CUEDC2Q9H467 287 aa22.37■■□□□ 1.17
TRIM47-204ENST00000587339 PHIPQ8WWQ0 1821 aa22.36■■□□□ 1.17
TRIM47-204ENST00000587339 FAM86B1E9PN63 330 aa22.36■■□□□ 1.17
TRIM47-204ENST00000587339 VWA5AO00534 786 aa22.36■■□□□ 1.17
TRIM47-204ENST00000587339 CYP3A4P08684 503 aa22.36■■□□□ 1.17
TRIM47-204ENST00000587339 FAM86B2P0C5J1 330 aa22.36■■□□□ 1.17
TRIM47-204ENST00000587339 PLCG1P19174 1290 aa22.36■■□□□ 1.17
TRIM47-204ENST00000587339 CIITAP33076 1130 aa22.36■■□□□ 1.17
TRIM47-204ENST00000587339 EAPPQ56P03 285 aaPredicted RBP22.36■■□□□ 1.17
TRIM47-204ENST00000587339 SLFN12Q8IYM2 578 aa22.36■■□□□ 1.17
TRIM47-204ENST00000587339 EHMT1Q9H9B1 1298 aa22.36■■□□□ 1.17
TRIM47-204ENST00000587339 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.36■■□□□ 1.17
TRIM47-204ENST00000587339 GTPBP6O43824 516 aaPredicted RBP22.35■■□□□ 1.17
TRIM47-204ENST00000587339 ALAS1P13196 640 aa22.35■■□□□ 1.17
TRIM47-204ENST00000587339 ZNF76P36508 570 aa22.35■■□□□ 1.17
TRIM47-204ENST00000587339 MCF2L2Q86YR7 1114 aa22.35■■□□□ 1.17
TRIM47-204ENST00000587339 MLKLQ8NB16 471 aa22.35■■□□□ 1.17
TRIM47-204ENST00000587339 GJA10Q969M2 543 aa22.35■■□□□ 1.17
TRIM47-204ENST00000587339 ATG4CQ96DT6 458 aa22.35■■□□□ 1.17
TRIM47-204ENST00000587339 CDCA5Q96FF9 252 aa22.35■■□□□ 1.17
TRIM47-204ENST00000587339 BLZF1Q9H2G9 400 aa22.35■■□□□ 1.17
TRIM47-204ENST00000587339 TAF1DQ9H5J8 278 aaPredicted RBP22.35■■□□□ 1.17
TRIM47-204ENST00000587339 DACH1Q9UI36 760 aa22.35■■□□□ 1.17
TRIM47-204ENST00000587339 TBX3O15119 743 aa22.35■■□□□ 1.17
TRIM47-204ENST00000587339 KRT79Q5XKE5 535 aa22.35■■□□□ 1.17
TRIM47-204ENST00000587339 MAGEF1Q9HAY2 307 aa22.35■■□□□ 1.17
TRIM47-204ENST00000587339 SMTNL1A8MU46 457 aa22.34■■□□□ 1.17
TRIM47-204ENST00000587339 NFIBO00712 420 aa22.34■■□□□ 1.17
TRIM47-204ENST00000587339 HSD17B4P51659 736 aa22.34■■□□□ 1.17
TRIM47-204ENST00000587339 CUL4BQ13620 913 aa22.34■■□□□ 1.17
TRIM47-204ENST00000587339 COG2Q14746 738 aa22.34■■□□□ 1.17
TRIM47-204ENST00000587339 CLEC4DQ8WXI8 215 aa22.34■■□□□ 1.17
TRIM47-204ENST00000587339 LENG9Q96B70 501 aa22.34■■□□□ 1.17
TRIM47-204ENST00000587339 CDK5RAP3Q96JB5 506 aa22.34■■□□□ 1.17
TRIM47-204ENST00000587339 KBTBD4Q9NVX7 518 aa22.34■■□□□ 1.17
TRIM47-204ENST00000587339 IKBKBO14920 756 aa22.33■■□□□ 1.17
TRIM47-204ENST00000587339 SH3D19Q5HYK7 790 aa22.33■■□□□ 1.17
TRIM47-204ENST00000587339 ETNPPLQ8TBG4 499 aa22.33■■□□□ 1.17
TRIM47-204ENST00000587339 SNX29Q8TEQ0 813 aa22.33■■□□□ 1.17
TRIM47-204ENST00000587339 HOMER2Q9NSB8 354 aa22.33■■□□□ 1.17
TRIM47-204ENST00000587339 MYL1P05976 194 aa22.33■■□□□ 1.16
TRIM47-204ENST00000587339 DSG3P32926 999 aa22.33■■□□□ 1.16
TRIM47-204ENST00000587339 TPM4P67936 248 aa22.33■■□□□ 1.16
TRIM47-204ENST00000587339 CATSPERGQ6ZRH7 1159 aa22.33■■□□□ 1.16
TRIM47-204ENST00000587339 PNMA8AQ86V59 439 aaPredicted RBP22.33■■□□□ 1.16
TRIM47-204ENST00000587339 UIMC1Q96RL1 719 aa22.33■■□□□ 1.16
TRIM47-204ENST00000587339 TRIM5Q9C035 493 aa22.33■■□□□ 1.16
TRIM47-204ENST00000587339 TTLL12Q14166 644 aaPredicted RBP22.32■■□□□ 1.16
TRIM47-204ENST00000587339 ANKRD13AQ8IZ07 590 aa22.32■■□□□ 1.16
TRIM47-204ENST00000587339 LRRC15Q8TF66 581 aa22.32■■□□□ 1.16
TRIM47-204ENST00000587339 WNK4Q96J92 1243 aa22.32■■□□□ 1.16
TRIM47-204ENST00000587339 FAM20AQ96MK3 541 aa22.32■■□□□ 1.16
TRIM47-204ENST00000587339 SCN4AP35499 1836 aa22.32■■□□□ 1.16
TRIM47-204ENST00000587339 MYL5Q02045 173 aa22.31■■□□□ 1.16
TRIM47-204ENST00000587339 GHRHRQ02643 423 aa22.31■■□□□ 1.16
TRIM47-204ENST00000587339 GRB10Q13322 594 aa22.31■■□□□ 1.16
TRIM47-204ENST00000587339 NCAPHQ15003 741 aa22.31■■□□□ 1.16
TRIM47-204ENST00000587339 MUM1L1Q5H9M0 696 aa22.31■■□□□ 1.16
TRIM47-204ENST00000587339 SARM1Q6SZW1 724 aa22.31■■□□□ 1.16
TRIM47-204ENST00000587339 CYP2W1Q8TAV3 490 aa22.31■■□□□ 1.16
TRIM47-204ENST00000587339 RMND1Q9NWS8 449 aa22.31■■□□□ 1.16
TRIM47-204ENST00000587339 MAP3K20Q9NYL2 800 aaKnown RBP22.31■■□□□ 1.16
TRIM47-204ENST00000587339 ADAMTS5Q9UNA0 930 aa22.31■■□□□ 1.16
TRIM47-204ENST00000587339 POTECB2RU33 542 aa22.31■■□□□ 1.16
TRIM47-204ENST00000587339 UBXN2AP68543 259 aa22.31■■□□□ 1.16
TRIM47-204ENST00000587339 SAMD3Q8N6K7 520 aa22.31■■□□□ 1.16
TRIM47-204ENST00000587339 CNKSR2Q8WXI2 1034 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms