RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 NKX2-4Q9H2Z4 354 aa17.79■□□□□ 0.44
PRKCSH-204ENST00000587290 KAT14Q9H8E8 782 aa17.79■□□□□ 0.44
PRKCSH-204ENST00000587290 ZSWIM5Q9P217 1185 aa17.79■□□□□ 0.44
PRKCSH-204ENST00000587290 YBX2Q9Y2T7 364 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-204ENST00000587290 PTPRSQ13332 1948 aa17.78■□□□□ 0.44
PRKCSH-204ENST00000587290 FGBP02675 491 aa17.78■□□□□ 0.44
PRKCSH-204ENST00000587290 MYOGP15173 224 aa17.78■□□□□ 0.44
PRKCSH-204ENST00000587290 PDE4AP27815 886 aa17.78■□□□□ 0.44
PRKCSH-204ENST00000587290 CPT1AP50416 773 aa17.78■□□□□ 0.44
PRKCSH-204ENST00000587290 QRICH1Q2TAL8 776 aa17.78■□□□□ 0.44
PRKCSH-204ENST00000587290 NBPF20Q3BBV1 942 aa17.78■□□□□ 0.44
PRKCSH-204ENST00000587290 PPM1EQ8WY54 764 aa17.78■□□□□ 0.44
PRKCSH-204ENST00000587290 TAAR1Q96RJ0 339 aa17.78■□□□□ 0.44
PRKCSH-204ENST00000587290 MTG1Q9BT17 334 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-204ENST00000587290 VAT1LQ9HCJ6 419 aa17.78■□□□□ 0.44
PRKCSH-204ENST00000587290 POLR3EQ9NVU0 708 aa17.78■□□□□ 0.44
PRKCSH-204ENST00000587290 TTC28Q96AY4 2481 aa17.77■□□□□ 0.44
PRKCSH-204ENST00000587290 REV3LO60673 3130 aa17.77■□□□□ 0.44
PRKCSH-204ENST00000587290 DHX16O60231 1041 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-204ENST00000587290 TXNP10599 105 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-204ENST00000587290 AAMPQ13685 434 aa17.77■□□□□ 0.44
PRKCSH-204ENST00000587290 DEFB128Q7Z7B8 93 aa17.77■□□□□ 0.44
PRKCSH-204ENST00000587290 STAG2Q8N3U4 1231 aa17.77■□□□□ 0.44
PRKCSH-204ENST00000587290 DNERQ8NFT8 737 aa17.77■□□□□ 0.44
PRKCSH-204ENST00000587290 SYTL5Q8TDW5 730 aaPredicted RBP17.77■□□□□ 0.44
PRKCSH-204ENST00000587290 SCFD2Q8WU76 684 aa17.77■□□□□ 0.44
PRKCSH-204ENST00000587290 DSCC1Q9BVC3 393 aa17.77■□□□□ 0.44
PRKCSH-204ENST00000587290 MUC3AQ02505 3323 aa17.76■□□□□ 0.43
PRKCSH-204ENST00000587290 LOC102724159A0A0B4J2E5 919 aa17.76■□□□□ 0.43
PRKCSH-204ENST00000587290 ZBBXA8MT70 800 aa17.76■□□□□ 0.43
PRKCSH-204ENST00000587290 GSPT1P15170 499 aaKnown RBP17.76■□□□□ 0.43
PRKCSH-204ENST00000587290 ADGRE1Q14246 886 aa17.76■□□□□ 0.43
PRKCSH-204ENST00000587290 TTLL4Q14679 1199 aa17.76■□□□□ 0.43
PRKCSH-204ENST00000587290 PWP2Q15269 919 aaKnown RBP17.76■□□□□ 0.43
PRKCSH-204ENST00000587290 IMMTQ16891 758 aaKnown RBP17.76■□□□□ 0.43
PRKCSH-204ENST00000587290 SEPT14Q6ZU15 432 aa17.76■□□□□ 0.43
PRKCSH-204ENST00000587290 JMJD4Q9H9V9 463 aa17.76■□□□□ 0.43
PRKCSH-204ENST00000587290 GPHNQ9NQX3 736 aaPredicted RBP17.76■□□□□ 0.43
PRKCSH-204ENST00000587290 LY6KQ17RY6 165 aa17.75■□□□□ 0.43
PRKCSH-204ENST00000587290 ASPRV1Q53RT3 343 aa17.75■□□□□ 0.43
PRKCSH-204ENST00000587290 CYB5R4Q7L1T6 521 aa17.75■□□□□ 0.43
PRKCSH-204ENST00000587290 CHST3Q7LGC8 479 aa17.75■□□□□ 0.43
PRKCSH-204ENST00000587290 AFG1LQ8WV93 481 aa17.75■□□□□ 0.43
PRKCSH-204ENST00000587290 ANKS1AQ92625 1134 aa17.75■□□□□ 0.43
PRKCSH-204ENST00000587290 PNMA2Q9UL42 364 aa17.75■□□□□ 0.43
PRKCSH-204ENST00000587290 ABCB11O95342 1321 aa17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 DOCK5Q9H7D0 1870 aa17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 A6NJR5 290 aa17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 HIP1O00291 1037 aa17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 PPP1R11O60927 126 aaPredicted RBP17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 PARP1P09874 1014 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 EIF2AK2P19525 551 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 IRX6P78412 446 aaPredicted RBP17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 CCDC62Q6P9F0 684 aa17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 FBXO11Q86XK2 927 aa17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 MPHOSPH6Q99547 160 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 UBAC1Q9BSL1 405 aa17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 MSRAQ9UJ68 235 aa17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 TAF6LQ9Y6J9 622 aa17.74■□□□□ 0.43
PRKCSH-204ENST00000587290 RAD50Q92878 1312 aa17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 OPLAHO14841 1288 aa17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 NKRFO15226 690 aaKnown RBP eCLIP17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 SORBS3O60504 671 aa17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 MMP3P08254 477 aa17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 ARHGAP1Q07960 439 aa17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 RAB30Q15771 203 aa17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 CCDC85BQ15834 202 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 SLC35G1Q2M3R5 365 aa17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 IFIT1BQ5T764 474 aaKnown RBP17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 RGS22Q8NE09 1264 aa17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 RMDN3Q96TC7 470 aa17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 GAS2L1Q99501 681 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 KRT23Q9C075 422 aa17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 MTIF3Q9H2K0 278 aaKnown RBP17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 SENP2Q9HC62 589 aa17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 SLC4A7Q9Y6M7 1214 aa17.73■□□□□ 0.43
PRKCSH-204ENST00000587290 CFBP00751 764 aa17.72■□□□□ 0.43
PRKCSH-204ENST00000587290 SUPT20HL2P0C7V6 817 aa17.72■□□□□ 0.43
PRKCSH-204ENST00000587290 IGFBP4P22692 258 aa17.72■□□□□ 0.43
PRKCSH-204ENST00000587290 SEC23AQ15436 765 aa17.72■□□□□ 0.43
PRKCSH-204ENST00000587290 BRDTQ58F21 947 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-204ENST00000587290 CCDC178Q5BJE1 867 aa17.72■□□□□ 0.43
PRKCSH-204ENST00000587290 TTC22Q5TAA0 569 aa17.72■□□□□ 0.43
PRKCSH-204ENST00000587290 RPUSD2Q8IZ73 545 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-204ENST00000587290 ZFP91Q96JP5 570 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-204ENST00000587290 SEZ6LQ9BYH1 1024 aa17.72■□□□□ 0.43
PRKCSH-204ENST00000587290 CTNNA3Q9UI47 895 aa17.72■□□□□ 0.43
PRKCSH-204ENST00000587290 SUPT16HQ9Y5B9 1047 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-204ENST00000587290 PRRC2BQ5JSZ5 2229 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-204ENST00000587290 ATP2A2P16615 1042 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-204ENST00000587290 PTH1RQ03431 593 aa17.71■□□□□ 0.43
PRKCSH-204ENST00000587290 ARHGEF16Q5VV41 709 aa17.71■□□□□ 0.43
PRKCSH-204ENST00000587290 PPP2R2DQ66LE6 453 aa17.71■□□□□ 0.43
PRKCSH-204ENST00000587290 NFRKBQ6P4R8 1299 aa17.71■□□□□ 0.43
PRKCSH-204ENST00000587290 NSUN6Q8TEA1 469 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-204ENST00000587290 CTAGE1Q96RT6 745 aa17.71■□□□□ 0.43
PRKCSH-204ENST00000587290 SLC28A3Q9HAS3 691 aa17.71■□□□□ 0.43
PRKCSH-204ENST00000587290 MAD2L2Q9UI95 211 aa17.71■□□□□ 0.43
PRKCSH-204ENST00000587290 MRPL11Q9Y3B7 192 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-204ENST00000587290 TCF20Q9UGU0 1960 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms