RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 Q7L0L9 218 aa13.06□□□□□ -0.32
ACTN4-209ENST00000586538 SLC17A8Q8NDX2 589 aa13.06□□□□□ -0.32
ACTN4-209ENST00000586538 SYTL5Q8TDW5 730 aaPredicted RBP13.06□□□□□ -0.32
ACTN4-209ENST00000586538 MAP4K1Q92918 833 aa13.06□□□□□ -0.32
ACTN4-209ENST00000586538 PURBQ96QR8 312 aaKnown RBP13.06□□□□□ -0.32
ACTN4-209ENST00000586538 MAP3K14Q99558 947 aa13.06□□□□□ -0.32
ACTN4-209ENST00000586538 PPP1R12CQ9BZL4 782 aa13.06□□□□□ -0.32
ACTN4-209ENST00000586538 PALM3A6NDB9 673 aaPredicted RBP13.05□□□□□ -0.32
ACTN4-209ENST00000586538 A6NJR5 290 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 EIF3JO75822 258 aaKnown RBP13.05□□□□□ -0.32
ACTN4-209ENST00000586538 DDAH1O94760 285 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 GH1P01241 217 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 GNAQP50148 359 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 HSD17B4P51659 736 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 GHRHRQ02643 423 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 GRM4Q14833 912 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 TMEM67Q5HYA8 995 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 RNF20Q5VTR2 975 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 CYB5R4Q7L1T6 521 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 CENPQQ7L2Z9 268 aaPredicted RBP13.05□□□□□ -0.32
ACTN4-209ENST00000586538 CCDC155Q8N6L0 562 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 CTCFLQ8NI51 663 aaPredicted RBP13.05□□□□□ -0.32
ACTN4-209ENST00000586538 LZTS2Q9BRK4 669 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 KATNAL1Q9BW62 490 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 IL25Q9H293 177 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 ALDH8A1Q9H2A2 487 aaPredicted RBP13.05□□□□□ -0.32
ACTN4-209ENST00000586538 CPVLQ9H3G5 476 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 IL23AQ9NPF7 189 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 MAD2L2Q9UI95 211 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 NOD1Q9Y239 953 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 PCDHA1Q9Y5I3 950 aa13.05□□□□□ -0.32
ACTN4-209ENST00000586538 CALM1P0DP23 149 aa13.04□□□□□ -0.32
ACTN4-209ENST00000586538 CALM2P0DP24 149 aa13.04□□□□□ -0.32
ACTN4-209ENST00000586538 CALM3P0DP25 149 aa13.04□□□□□ -0.32
ACTN4-209ENST00000586538 CSF2RAP15509 400 aa13.04□□□□□ -0.32
ACTN4-209ENST00000586538 CASTP20810 708 aaKnown RBP13.04□□□□□ -0.32
ACTN4-209ENST00000586538 IRX5P78411 483 aaPredicted RBP13.04□□□□□ -0.32
ACTN4-209ENST00000586538 PTH1RQ03431 593 aa13.04□□□□□ -0.32
ACTN4-209ENST00000586538 BFSP2Q13515 415 aa13.04□□□□□ -0.32
ACTN4-209ENST00000586538 HOMER1Q86YM7 354 aa13.04□□□□□ -0.32
ACTN4-209ENST00000586538 MTMR8Q96EF0 704 aa13.04□□□□□ -0.32
ACTN4-209ENST00000586538 TMEM87BQ96K49 555 aa13.04□□□□□ -0.32
ACTN4-209ENST00000586538 RIOX1Q9H6W3 641 aa13.04□□□□□ -0.32
ACTN4-209ENST00000586538 PXMP2Q9NR77 195 aa13.04□□□□□ -0.32
ACTN4-209ENST00000586538 SEC63Q9UGP8 760 aaKnown RBP13.04□□□□□ -0.32
ACTN4-209ENST00000586538 RBM8AQ9Y5S9 174 aaKnown RBP13.04□□□□□ -0.32
ACTN4-209ENST00000586538 MRVI1Q9Y6F6 885 aa13.04□□□□□ -0.32
ACTN4-209ENST00000586538 PNMA6FA0A0J9YX94 578 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 CCDC69A6NI79 296 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 GCOM1H8Y6P7 765 aaPredicted RBP13.03□□□□□ -0.32
ACTN4-209ENST00000586538 B4GALT4O60513 344 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 STAM2O75886 525 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 FGBP02675 491 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 NR3C2P08235 984 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 POLR2MP0CAP2 368 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 ACTN1P12814 892 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 SMARCA1P28370 1054 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 MCM5P33992 734 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 RFC2P35250 354 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 RAB30Q15771 203 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 DGKDQ16760 1214 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 GNPTABQ3T906 1256 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 FAM47CQ5HY64 1035 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 SEPT14Q6ZU15 432 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 CUL5Q93034 780 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 EMID1Q96A84 441 aaPredicted RBP13.03□□□□□ -0.32
ACTN4-209ENST00000586538 TAAR1Q96RJ0 339 aa13.03□□□□□ -0.32
ACTN4-209ENST00000586538 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.03□□□□□ -0.324e-7■■■□□ 17.1
ACTN4-209ENST00000586538 DDX49Q9Y6V7 483 aaKnown RBP13.03□□□□□ -0.32
ACTN4-209ENST00000586538 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 PARNO95453 639 aaKnown RBP13.02□□□□□ -0.33
ACTN4-209ENST00000586538 TGFB3P10600 412 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 EIF2AK2P19525 551 aaKnown RBP13.02□□□□□ -0.33
ACTN4-209ENST00000586538 DNAJB2P25686 324 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 CCND2P30279 289 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 PSMC6P62333 389 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 TROAPQ12815 778 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 LAMC2Q13753 1193 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 BMP2KLQ5H9B9 411 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 TMEM240Q5SV17 173 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 NFXL1Q6ZNB6 911 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 STOX1Q6ZVD7 989 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 MB21D2Q8IYB1 491 aaPredicted RBP13.02□□□□□ -0.33
ACTN4-209ENST00000586538 RETREG2Q8NC44 543 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 CAGE1Q8TC20 777 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 HERVK_113Q902F9 699 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 RRP36Q96EU6 259 aaKnown RBP13.02□□□□□ -0.33
ACTN4-209ENST00000586538 NOC4LQ9BVI4 516 aaKnown RBP13.02□□□□□ -0.33
ACTN4-209ENST00000586538 SPZ1Q9BXG8 430 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 SEMA6BQ9H3T3 888 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 MSRAQ9UJ68 235 aa13.02□□□□□ -0.33
ACTN4-209ENST00000586538 KIAA1217Q5T5P2 1943 aa13.01□□□□□ -0.33
ACTN4-209ENST00000586538 SCN10AQ9Y5Y9 1956 aa13.01□□□□□ -0.33
ACTN4-209ENST00000586538 MMP3P08254 477 aa13.01□□□□□ -0.33
ACTN4-209ENST00000586538 CYP2C18P33260 490 aa13.01□□□□□ -0.33
ACTN4-209ENST00000586538 EPHB4P54760 987 aa13.01□□□□□ -0.33
ACTN4-209ENST00000586538 NBPF20Q3BBV1 942 aa13.01□□□□□ -0.33
ACTN4-209ENST00000586538 CCDC62Q6P9F0 684 aa13.01□□□□□ -0.33
ACTN4-209ENST00000586538 SYNE3Q6ZMZ3 975 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 1302.1 ms