RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 CHST3Q7LGC8 479 aa23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 PLEKHM2Q8IWE5 1019 aa23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 ADGRF4Q8IZF3 695 aa23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 DNERQ8NFT8 737 aa23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 MPHOSPH6Q99547 160 aaKnown RBP23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 FTOQ9C0B1 505 aaKnown RBP eCLIP23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 RWDD1Q9H446 243 aaPredicted RBP23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 CERS4Q9HA82 394 aa23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 PNMA2Q9UL42 364 aa23.56■■□□□ 1.36
CLPTM1-204ENST00000585961 B4E1Z4 1266 aa23.55■■□□□ 1.36
CLPTM1-204ENST00000585961 NKRFO15226 690 aaKnown RBP eCLIP23.55■■□□□ 1.36
CLPTM1-204ENST00000585961 PCP11498 1178 aaKnown RBP23.55■■□□□ 1.36
CLPTM1-204ENST00000585961 MFAP1P55081 439 aaKnown RBP23.55■■□□□ 1.36
CLPTM1-204ENST00000585961 GPATCH4Q5T3I0 446 aaKnown RBP23.55■■□□□ 1.36
CLPTM1-204ENST00000585961 PPP2R2DQ66LE6 453 aa23.55■■□□□ 1.36
CLPTM1-204ENST00000585961 DGKHQ86XP1 1220 aa23.55■■□□□ 1.36
CLPTM1-204ENST00000585961 RETREG2Q8NC44 543 aa23.55■■□□□ 1.36
CLPTM1-204ENST00000585961 PNMA1Q8ND90 353 aa23.55■■□□□ 1.36
CLPTM1-204ENST00000585961 KAT14Q9H8E8 782 aa23.55■■□□□ 1.36
CLPTM1-204ENST00000585961 LCTP09848 1927 aa23.55■■□□□ 1.36
CLPTM1-204ENST00000585961 A6NJR5 290 aa23.54■■□□□ 1.36
CLPTM1-204ENST00000585961 B4DLN1 442 aa23.54■■□□□ 1.36
CLPTM1-204ENST00000585961 KPNA6O60684 536 aa23.54■■□□□ 1.36
CLPTM1-204ENST00000585961 MRPL12P52815 198 aaKnown RBP23.54■■□□□ 1.36
CLPTM1-204ENST00000585961 CDC37Q16543 378 aaPredicted RBP23.54■■□□□ 1.36
CLPTM1-204ENST00000585961 CHD1LQ86WJ1 897 aa23.54■■□□□ 1.36
CLPTM1-204ENST00000585961 TICAM2Q86XR7 235 aa23.54■■□□□ 1.36
CLPTM1-204ENST00000585961 AFG1LQ8WV93 481 aa23.54■■□□□ 1.36
CLPTM1-204ENST00000585961 ZSWIM5Q9P217 1185 aa23.54■■□□□ 1.36
CLPTM1-204ENST00000585961 PCDHA11Q9Y5I1 949 aa23.54■■□□□ 1.36
CLPTM1-204ENST00000585961 ZMYM6O95789 1325 aa23.54■■□□□ 1.36
CLPTM1-204ENST00000585961 WDR19Q8NEZ3 1342 aa23.54■■□□□ 1.36
CLPTM1-204ENST00000585961 DHX16O60231 1041 aaKnown RBP23.53■■□□□ 1.36
CLPTM1-204ENST00000585961 IQCF3P0C7M6 154 aa23.53■■□□□ 1.36
CLPTM1-204ENST00000585961 NFRKBQ6P4R8 1299 aa23.53■■□□□ 1.36
CLPTM1-204ENST00000585961 IQCA1Q86XH1 822 aa23.53■■□□□ 1.36
CLPTM1-204ENST00000585961 RGS22Q8NE09 1264 aa23.53■■□□□ 1.36
CLPTM1-204ENST00000585961 SYTL5Q8TDW5 730 aaPredicted RBP23.53■■□□□ 1.36
CLPTM1-204ENST00000585961 ASB2Q96Q27 587 aa23.53■■□□□ 1.36
CLPTM1-204ENST00000585961 COL20A1Q9P218 1284 aa23.53■■□□□ 1.36
CLPTM1-204ENST00000585961 NOD1Q9Y239 953 aa23.53■■□□□ 1.36
CLPTM1-204ENST00000585961 RAD50Q92878 1312 aa23.53■■□□□ 1.36
CLPTM1-204ENST00000585961 TMEM67Q5HYA8 995 aa23.52■■□□□ 1.36
CLPTM1-204ENST00000585961 SMC5Q8IY18 1101 aa23.52■■□□□ 1.36
CLPTM1-204ENST00000585961 ATXN2LQ8WWM7 1075 aaKnown RBP23.52■■□□□ 1.36
CLPTM1-204ENST00000585961 ZSCAN10Q96SZ4 725 aaPredicted RBP23.52■■□□□ 1.36
CLPTM1-204ENST00000585961 DIAPH3Q9NSV4 1193 aa23.52■■□□□ 1.36
CLPTM1-204ENST00000585961 THEGQ9P2T0 379 aa23.52■■□□□ 1.36
CLPTM1-204ENST00000585961 LRRC37A2A6NM11 1700 aa23.51■■□□□ 1.35
CLPTM1-204ENST00000585961 TNFRSF10AO00220 468 aa23.51■■□□□ 1.35
CLPTM1-204ENST00000585961 MRPS5P82675 430 aaKnown RBP23.51■■□□□ 1.35
CLPTM1-204ENST00000585961 CCDC62Q6P9F0 684 aa23.51■■□□□ 1.35
CLPTM1-204ENST00000585961 YTHDC1Q96MU7 727 aaKnown RBP23.51■■□□□ 1.35
CLPTM1-204ENST00000585961 CHD7Q9P2D1 2997 aa23.51■■□□□ 1.35
CLPTM1-204ENST00000585961 CA3P07451 260 aa23.5■■□□□ 1.35
CLPTM1-204ENST00000585961 ACTN1P12814 892 aa23.5■■□□□ 1.35
CLPTM1-204ENST00000585961 NUCB1Q02818 461 aa23.5■■□□□ 1.35
CLPTM1-204ENST00000585961 PTGISQ16647 500 aa23.5■■□□□ 1.35
CLPTM1-204ENST00000585961 QRICH1Q2TAL8 776 aa23.5■■□□□ 1.35
CLPTM1-204ENST00000585961 FBXO11Q86XK2 927 aa23.5■■□□□ 1.35
CLPTM1-204ENST00000585961 ENAHQ8N8S7 591 aaPredicted RBP23.5■■□□□ 1.35
CLPTM1-204ENST00000585961 NSUN6Q8TEA1 469 aaKnown RBP23.5■■□□□ 1.35
CLPTM1-204ENST00000585961 ANKS1AQ92625 1134 aa23.5■■□□□ 1.35
CLPTM1-204ENST00000585961 RMDN3Q96TC7 470 aa23.5■■□□□ 1.35
CLPTM1-204ENST00000585961 SORBS3O60504 671 aa23.49■■□□□ 1.35
CLPTM1-204ENST00000585961 PFKMP08237 780 aa23.49■■□□□ 1.35
CLPTM1-204ENST00000585961 EIF2AK2P19525 551 aaKnown RBP23.49■■□□□ 1.35
CLPTM1-204ENST00000585961 STXBP2Q15833 593 aa23.49■■□□□ 1.35
CLPTM1-204ENST00000585961 CCDC178Q5BJE1 867 aa23.49■■□□□ 1.35
CLPTM1-204ENST00000585961 ARHGEF16Q5VV41 709 aa23.49■■□□□ 1.35
CLPTM1-204ENST00000585961 GDF6Q6KF10 455 aaPredicted RBP23.49■■□□□ 1.35
CLPTM1-204ENST00000585961 JMJD4Q9H9V9 463 aa23.49■■□□□ 1.35
CLPTM1-204ENST00000585961 ABCB11O95342 1321 aa23.49■■□□□ 1.35
CLPTM1-204ENST00000585961 CFBP00751 764 aa23.48■■□□□ 1.35
CLPTM1-204ENST00000585961 GH1P01241 217 aa23.48■■□□□ 1.35
CLPTM1-204ENST00000585961 PARP1P09874 1014 aaKnown RBP23.48■■□□□ 1.35
CLPTM1-204ENST00000585961 ARHGAP1Q07960 439 aa23.48■■□□□ 1.35
CLPTM1-204ENST00000585961 BFSP2Q13515 415 aa23.48■■□□□ 1.35
CLPTM1-204ENST00000585961 SKIV2LQ15477 1246 aaKnown RBP23.48■■□□□ 1.35
CLPTM1-204ENST00000585961 MCF2L2Q86YR7 1114 aa23.48■■□□□ 1.35
CLPTM1-204ENST00000585961 STAG2Q8N3U4 1231 aa23.48■■□□□ 1.35
CLPTM1-204ENST00000585961 EXOC6Q8TAG9 804 aa23.48■■□□□ 1.35
CLPTM1-204ENST00000585961 OSBPL3Q9H4L5 887 aa23.48■■□□□ 1.35
CLPTM1-204ENST00000585961 MRPL11Q9Y3B7 192 aaKnown RBP23.48■■□□□ 1.35
CLPTM1-204ENST00000585961 TTC28Q96AY4 2481 aa23.47■■□□□ 1.35
CLPTM1-204ENST00000585961 ARHGEF15O94989 841 aa23.47■■□□□ 1.35
CLPTM1-204ENST00000585961 MMP3P08254 477 aa23.47■■□□□ 1.35
CLPTM1-204ENST00000585961 RFC2P35250 354 aa23.47■■□□□ 1.35
CLPTM1-204ENST00000585961 PTPN11Q06124 597 aaPredicted RBP23.47■■□□□ 1.35
CLPTM1-204ENST00000585961 IMMTQ16891 758 aaKnown RBP23.47■■□□□ 1.35
CLPTM1-204ENST00000585961 ASPRV1Q53RT3 343 aa23.47■■□□□ 1.35
CLPTM1-204ENST00000585961 KRT40Q6A162 431 aa23.47■■□□□ 1.35
CLPTM1-204ENST00000585961 KAT2BQ92831 832 aa23.47■■□□□ 1.35
CLPTM1-204ENST00000585961 ALG1Q9BT22 464 aa23.47■■□□□ 1.35
CLPTM1-204ENST00000585961 EPOPA6NHQ4 379 aa23.46■■□□□ 1.35
CLPTM1-204ENST00000585961 CASTP20810 708 aaKnown RBP23.46■■□□□ 1.35
CLPTM1-204ENST00000585961 TFF2Q03403 129 aa23.46■■□□□ 1.35
CLPTM1-204ENST00000585961 TMCO2Q7Z6W1 182 aaPredicted RBP23.46■■□□□ 1.35
CLPTM1-204ENST00000585961 ADAMTS19Q8TE59 1207 aa23.46■■□□□ 1.35
CLPTM1-204ENST00000585961 ARNTL2Q8WYA1 636 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms