RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 RAB11FIP4Q86YS3 637 aa15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 SEZ6LQ9BYH1 1024 aa15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 PXMP2Q9NR77 195 aa15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 CENPFP49454 3210 aa15.91■□□□□ 0.14
PRKCSH-202ENST00000585540 ESYT2A0FGR8 921 aa15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 PRPF3O43395 683 aaKnown RBP15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 ZEB2O60315 1214 aa15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 ADAMTS4O75173 837 aa15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 TAL1P17542 331 aaPredicted RBP15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 PDIA3P30101 505 aaKnown RBP15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 CDC27P30260 824 aa15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 GJA9P57773 515 aa15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 TNFAIP2Q03169 654 aa15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 TTLL4Q14679 1199 aa15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 TRIM22Q8IYM9 498 aa15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 CCDC148Q8NFR7 591 aa15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 SMARCC2Q8TAQ2 1214 aa15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 PAWRQ96IZ0 340 aaKnown RBP15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 PDCD2LQ9BRP1 358 aa15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 FAM217BQ9NTX9 383 aaPredicted RBP15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 BARHL2Q9NY43 387 aa15.9■□□□□ 0.14
PRKCSH-202ENST00000585540 CPLX1O14810 134 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 EIF3JO75822 258 aaKnown RBP15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 FOSP01100 380 aaPredicted RBP15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 NR3C2P08235 984 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 MNX1P50219 401 aaPredicted RBP15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 AP3B2Q13367 1082 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 LRRC41Q15345 812 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 PFKFB3Q16875 520 aaPredicted RBP15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 GNPTABQ3T906 1256 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 DUSP28Q4G0W2 176 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 BRDTQ58F21 947 aaPredicted RBP15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 C1orf53Q5VUE5 145 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 TAPT1Q6NXT6 567 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 HEATR3Q7Z4Q2 680 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 TAAR1Q96RJ0 339 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 BACH2Q9BYV9 841 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 C22orf23Q9BZE7 217 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 PSTPIP2Q9H939 334 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 PHF24Q9UPV7 400 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 GNEQ9Y223 722 aaKnown RBP15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 SYNRGQ9UMZ2 1314 aa15.89■□□□□ 0.13
PRKCSH-202ENST00000585540 CABYRO75952 493 aa15.88■□□□□ 0.13
PRKCSH-202ENST00000585540 SCG2P13521 617 aa15.88■□□□□ 0.13
PRKCSH-202ENST00000585540 CCND2P30279 289 aa15.88■□□□□ 0.13
PRKCSH-202ENST00000585540 RBM25P49756 843 aaKnown RBP15.88■□□□□ 0.13
PRKCSH-202ENST00000585540 TLK2Q86UE8 772 aa15.88■□□□□ 0.13
PRKCSH-202ENST00000585540 FBXO16Q8IX29 292 aaPredicted RBP15.88■□□□□ 0.13
PRKCSH-202ENST00000585540 KLHDC9Q8NEP7 349 aa15.88■□□□□ 0.13
PRKCSH-202ENST00000585540 AP5M1Q9H0R1 490 aa15.88■□□□□ 0.13
PRKCSH-202ENST00000585540 COL20A1Q9P218 1284 aa15.88■□□□□ 0.13
PRKCSH-202ENST00000585540 NR2E3Q9Y5X4 410 aa15.88■□□□□ 0.13
PRKCSH-202ENST00000585540 SPDYE3A6NKU9 549 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 TGFB3P10600 412 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 GNA11P29992 359 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 ADD1P35611 737 aaKnown RBP15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 ADCYAP1R1P41586 468 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 NAPAP54920 295 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 PGM5Q15124 567 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 NTRK3Q16288 839 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 CCDC82Q8N4S0 544 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 BICD2Q8TD16 824 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 PIBF1Q8WXW3 757 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 WDR11Q9BZH6 1224 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 SLKQ9H2G2 1235 aaPredicted RBP15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 RIC8AQ9NPQ8 531 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 SH3GLB2Q9NR46 395 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 V9GY48 417 aaPredicted RBP15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 KIAA1217Q5T5P2 1943 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 STK36Q9NRP7 1315 aa15.87■□□□□ 0.13
PRKCSH-202ENST00000585540 MEIS2O14770 477 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 KPNA6O60684 536 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 DEXIO95424 95 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 EIF2AK2P19525 551 aaKnown RBP15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 CPT1AP50416 773 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 ADCY7P51828 1080 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 PRPF38BQ5VTL8 546 aaKnown RBP15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 WWC2Q6AWC2 1192 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 VSIG10LQ86VR7 867 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 CMTR1Q8N1G2 835 aaKnown RBP15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 TBC1D5Q92609 795 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 CDHR1Q96JP9 859 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 KIF2CQ99661 725 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 C6orf50Q9HD87 102 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 BRCA2P51587 3418 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 ELP1O95163 1332 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 MROH7Q68CQ1 1323 aa15.86■□□□□ 0.13
PRKCSH-202ENST00000585540 PDE4DIPQ5VU43 2346 aa15.85■□□□□ 0.13
PRKCSH-202ENST00000585540 STXBP3O00186 592 aa15.85■□□□□ 0.13
PRKCSH-202ENST00000585540 PFKFB2O60825 505 aa15.85■□□□□ 0.13
PRKCSH-202ENST00000585540 SLC34A2O95436 690 aa15.85■□□□□ 0.13
PRKCSH-202ENST00000585540 PGK1P00558 417 aa15.85■□□□□ 0.13
PRKCSH-202ENST00000585540 C6orf222P0C671 652 aaPredicted RBP15.85■□□□□ 0.13
PRKCSH-202ENST00000585540 SMPD1P17405 629 aa15.85■□□□□ 0.13
PRKCSH-202ENST00000585540 XBP1P17861 261 aa15.85■□□□□ 0.13
PRKCSH-202ENST00000585540 HOXA13P31271 388 aaPredicted RBP15.85■□□□□ 0.13
PRKCSH-202ENST00000585540 NEK4P51957 841 aa15.85■□□□□ 0.13
PRKCSH-202ENST00000585540 SSRP1Q08945 709 aaKnown RBP15.85■□□□□ 0.13
PRKCSH-202ENST00000585540 SNX17Q15036 470 aa15.85■□□□□ 0.13
PRKCSH-202ENST00000585540 PCNX4Q63HM2 1172 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms