RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 TXNP10599 105 aaKnown RBP20.74■□□□□ 0.91
SRSF1-209ENST00000585096 ITGB8P26012 769 aa20.74■□□□□ 0.91
SRSF1-209ENST00000585096 KIF5BP33176 963 aa20.74■□□□□ 0.91
SRSF1-209ENST00000585096 ITGA7Q13683 1181 aa20.74■□□□□ 0.91
SRSF1-209ENST00000585096 STXBP2Q15833 593 aa20.74■□□□□ 0.91
SRSF1-209ENST00000585096 NFXL1Q6ZNB6 911 aa20.74■□□□□ 0.91
SRSF1-209ENST00000585096 CTCFLQ8NI51 663 aaPredicted RBP20.74■□□□□ 0.91
SRSF1-209ENST00000585096 PIGSQ96S52 555 aa20.74■□□□□ 0.91
SRSF1-209ENST00000585096 LY9Q9HBG7 655 aa20.74■□□□□ 0.91
SRSF1-209ENST00000585096 GPHNQ9NQX3 736 aaPredicted RBP20.74■□□□□ 0.91
SRSF1-209ENST00000585096 COL20A1Q9P218 1284 aa20.74■□□□□ 0.91
SRSF1-209ENST00000585096 PNMA6FA0A0J9YX94 578 aa20.73■□□□□ 0.91
SRSF1-209ENST00000585096 CDC45O75419 566 aa20.73■□□□□ 0.91
SRSF1-209ENST00000585096 TIMP1P01033 207 aa20.73■□□□□ 0.91
SRSF1-209ENST00000585096 HSD17B4P51659 736 aa20.73■□□□□ 0.91
SRSF1-209ENST00000585096 GHRHRQ02643 423 aa20.73■□□□□ 0.91
SRSF1-209ENST00000585096 FPGSQ05932 587 aa20.73■□□□□ 0.91
SRSF1-209ENST00000585096 FAM126BQ8IXS8 530 aa20.73■□□□□ 0.91
SRSF1-209ENST00000585096 ZNF654Q8IZM8 581 aa20.73■□□□□ 0.91
SRSF1-209ENST00000585096 SLC43A3Q8NBI5 491 aa20.73■□□□□ 0.91
SRSF1-209ENST00000585096 TBX21Q9UL17 535 aa20.73■□□□□ 0.91
SRSF1-209ENST00000585096 DNAH12Q6ZR08 3092 aa20.73■□□□□ 0.91
SRSF1-209ENST00000585096 CCDC69A6NI79 296 aa20.72■□□□□ 0.91
SRSF1-209ENST00000585096 SHHQ15465 462 aa20.72■□□□□ 0.91
SRSF1-209ENST00000585096 SLC35G1Q2M3R5 365 aa20.72■□□□□ 0.91
SRSF1-209ENST00000585096 LZTS2Q9BRK4 669 aa20.72■□□□□ 0.91
SRSF1-209ENST00000585096 MCM3APO60318 1980 aa20.72■□□□□ 0.91
SRSF1-209ENST00000585096 SH2B2O14492 632 aaPredicted RBP20.71■□□□□ 0.91
SRSF1-209ENST00000585096 OPLAHO14841 1288 aa20.71■□□□□ 0.91
SRSF1-209ENST00000585096 CYTH3O43739 400 aa20.71■□□□□ 0.91
SRSF1-209ENST00000585096 KPNA6O60684 536 aa20.71■□□□□ 0.91
SRSF1-209ENST00000585096 EIF3JO75822 258 aaKnown RBP20.71■□□□□ 0.91
SRSF1-209ENST00000585096 MYL3P08590 195 aa20.71■□□□□ 0.91
SRSF1-209ENST00000585096 CALM1P0DP23 149 aa20.71■□□□□ 0.91
SRSF1-209ENST00000585096 CALM2P0DP24 149 aa20.71■□□□□ 0.91
SRSF1-209ENST00000585096 CALM3P0DP25 149 aa20.71■□□□□ 0.91
SRSF1-209ENST00000585096 EIF2AK2P19525 551 aaKnown RBP20.71■□□□□ 0.91
SRSF1-209ENST00000585096 SMARCA1P28370 1054 aa20.71■□□□□ 0.91
SRSF1-209ENST00000585096 LIFRP42702 1097 aa20.71■□□□□ 0.91
SRSF1-209ENST00000585096 GNAQP50148 359 aa20.71■□□□□ 0.91
SRSF1-209ENST00000585096 SEPT14Q6ZU15 432 aa20.71■□□□□ 0.91
SRSF1-209ENST00000585096 PXMP2Q9NR77 195 aa20.71■□□□□ 0.91
SRSF1-209ENST00000585096 LRRC37A2A6NM11 1700 aa20.7■□□□□ 0.9
SRSF1-209ENST00000585096 A6NJR5 290 aa20.7■□□□□ 0.9
SRSF1-209ENST00000585096 GCOM1H8Y6P7 765 aaPredicted RBP20.7■□□□□ 0.9
SRSF1-209ENST00000585096 CD4P01730 458 aa20.7■□□□□ 0.9
SRSF1-209ENST00000585096 NR3C2P08235 984 aa20.7■□□□□ 0.9
SRSF1-209ENST00000585096 POLR2MP0CAP2 368 aa20.7■□□□□ 0.9
SRSF1-209ENST00000585096 PSMC6P62333 389 aa20.7■□□□□ 0.9
SRSF1-209ENST00000585096 PURAQ00577 322 aaKnown RBP20.7■□□□□ 0.9
SRSF1-209ENST00000585096 C9orf50Q5SZB4 431 aa20.7■□□□□ 0.9
SRSF1-209ENST00000585096 MFSD5Q6N075 450 aa20.7■□□□□ 0.9
SRSF1-209ENST00000585096 RRP36Q96EU6 259 aaKnown RBP20.7■□□□□ 0.9
SRSF1-209ENST00000585096 MTG1Q9BT17 334 aaPredicted RBP20.7■□□□□ 0.9
SRSF1-209ENST00000585096 MYL10Q9BUA6 226 aa20.7■□□□□ 0.9
SRSF1-209ENST00000585096 LAMA3Q16787 3333 aa20.7■□□□□ 0.9
SRSF1-209ENST00000585096 ARIH2O95376 493 aa20.69■□□□□ 0.9
SRSF1-209ENST00000585096 NEFLP07196 543 aa20.69■□□□□ 0.9
SRSF1-209ENST00000585096 CCDC62Q6P9F0 684 aa20.69■□□□□ 0.9
SRSF1-209ENST00000585096 TMEM199Q8N511 208 aa20.69■□□□□ 0.9
SRSF1-209ENST00000585096 DEFB123Q8N688 67 aa20.69■□□□□ 0.9
SRSF1-209ENST00000585096 COPS5Q92905 334 aa20.69■□□□□ 0.9
SRSF1-209ENST00000585096 SPZ1Q9BXG8 430 aa20.69■□□□□ 0.9
SRSF1-209ENST00000585096 SLC12A7Q9Y666 1083 aa20.69■□□□□ 0.9
SRSF1-209ENST00000585096 GRIN2DO15399 1336 aa20.69■□□□□ 0.9
SRSF1-209ENST00000585096 LCTP09848 1927 aa20.68■□□□□ 0.9
SRSF1-209ENST00000585096 GH1P01241 217 aa20.68■□□□□ 0.9
SRSF1-209ENST00000585096 HOXA13P31271 388 aaPredicted RBP20.68■□□□□ 0.9
SRSF1-209ENST00000585096 PPIGQ13427 754 aaKnown RBP eCLIP20.68■□□□□ 0.95e-26■■□□□ 13.2
SRSF1-209ENST00000585096 PIBF1Q8WXW3 757 aa20.68■□□□□ 0.9
SRSF1-209ENST00000585096 NEK1Q96PY6 1258 aa20.68■□□□□ 0.9
SRSF1-209ENST00000585096 PDCD2LQ9BRP1 358 aa20.68■□□□□ 0.9
SRSF1-209ENST00000585096 SEC63Q9UGP8 760 aaKnown RBP20.68■□□□□ 0.9
SRSF1-209ENST00000585096 SZT2Q5T011 3432 aa20.67■□□□□ 0.9
SRSF1-209ENST00000585096 SUPT20HL2P0C7V6 817 aa20.67■□□□□ 0.9
SRSF1-209ENST00000585096 EPHB4P54760 987 aa20.67■□□□□ 0.9
SRSF1-209ENST00000585096 LY6KQ17RY6 165 aa20.67■□□□□ 0.9
SRSF1-209ENST00000585096 SYNE3Q6ZMZ3 975 aa20.67■□□□□ 0.9
SRSF1-209ENST00000585096 RNPC3Q96LT9 517 aaKnown RBP20.67■□□□□ 0.9
SRSF1-209ENST00000585096 PPP1R12CQ9BZL4 782 aa20.67■□□□□ 0.9
SRSF1-209ENST00000585096 MRVI1Q9Y6F6 885 aa20.67■□□□□ 0.9
SRSF1-209ENST00000585096 LTBP2Q14767 1821 aa20.67■□□□□ 0.9
SRSF1-209ENST00000585096 MYCLP12524 364 aaPredicted RBP20.66■□□□□ 0.9
SRSF1-209ENST00000585096 KRT32Q14532 448 aa20.66■□□□□ 0.9
SRSF1-209ENST00000585096 KCNV1Q6PIU1 500 aa20.66■□□□□ 0.9
SRSF1-209ENST00000585096 VSIG10LQ86VR7 867 aa20.66■□□□□ 0.9
SRSF1-209ENST00000585096 FCHSD1Q86WN1 690 aa20.66■□□□□ 0.9
SRSF1-209ENST00000585096 TRPV6Q9H1D0 765 aa20.66■□□□□ 0.9
SRSF1-209ENST00000585096 ALDH8A1Q9H2A2 487 aaPredicted RBP20.66■□□□□ 0.9
SRSF1-209ENST00000585096 HIPK3Q9H422 1215 aa20.66■□□□□ 0.9
SRSF1-209ENST00000585096 DDX41Q9UJV9 622 aaKnown RBP20.66■□□□□ 0.9
SRSF1-209ENST00000585096 B4GALT4O60513 344 aa20.65■□□□□ 0.9
SRSF1-209ENST00000585096 ARHGAP1Q07960 439 aa20.65■□□□□ 0.9
SRSF1-209ENST00000585096 COL9A3Q14050 684 aaPredicted RBP20.65■□□□□ 0.9
SRSF1-209ENST00000585096 PGM5Q15124 567 aa20.65■□□□□ 0.9
SRSF1-209ENST00000585096 TSGA10IPQ3SY00 556 aa20.65■□□□□ 0.9
SRSF1-209ENST00000585096 FAM109BQ6ICB4 259 aaPredicted RBP20.65■□□□□ 0.9
SRSF1-209ENST00000585096 SGMS1Q86VZ5 419 aa20.65■□□□□ 0.9
SRSF1-209ENST00000585096 AFG1LQ8WV93 481 aa20.65■□□□□ 0.9
SRSF1-209ENST00000585096 LRRC2Q9BYS8 371 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms