RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 FERMT2Q96AC1 680 aa19.41■□□□□ 0.7
CSNK1D-225ENST00000584913 RRP36Q96EU6 259 aaKnown RBP19.41■□□□□ 0.7
CSNK1D-225ENST00000584913 RMDN3Q96TC7 470 aa19.41■□□□□ 0.7
CSNK1D-225ENST00000584913 WDR11Q9BZH6 1224 aa19.41■□□□□ 0.7
CSNK1D-225ENST00000584913 PXMP2Q9NR77 195 aa19.41■□□□□ 0.7
CSNK1D-225ENST00000584913 PDGFCQ9NRA1 345 aa19.41■□□□□ 0.7
CSNK1D-225ENST00000584913 DNAH12Q6ZR08 3092 aa19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 KPNA6O60684 536 aa19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 CLTBP09497 229 aa19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 SYN1P17600 705 aa19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 BRDTQ58F21 947 aaPredicted RBP19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 SYNE3Q6ZMZ3 975 aa19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 NOL8Q76FK4 1167 aaKnown RBP19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 EEPD1Q7L9B9 569 aa19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 HOMER1Q86YM7 354 aa19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 SLC43A3Q8NBI5 491 aa19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 LBHD1Q9BQE6 289 aaPredicted RBP19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 POLR3EQ9NVU0 708 aa19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 RBM28Q9NW13 759 aaKnown RBP19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 COL20A1Q9P218 1284 aa19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 SEC63Q9UGP8 760 aaKnown RBP19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 FRMPD4Q14CM0 1322 aa19.4■□□□□ 0.7
CSNK1D-225ENST00000584913 DCDC2CA8MYV0 355 aa19.39■□□□□ 0.69
CSNK1D-225ENST00000584913 KIAA0355O15063 1070 aa19.39■□□□□ 0.69
CSNK1D-225ENST00000584913 EIF3JO75822 258 aaKnown RBP19.39■□□□□ 0.69
CSNK1D-225ENST00000584913 CFBP00751 764 aa19.39■□□□□ 0.69
CSNK1D-225ENST00000584913 TLE2Q04725 743 aa19.39■□□□□ 0.69
CSNK1D-225ENST00000584913 ARHGEF16Q5VV41 709 aa19.39■□□□□ 0.69
CSNK1D-225ENST00000584913 APOA5Q6Q788 366 aa19.39■□□□□ 0.69
CSNK1D-225ENST00000584913 TAAR1Q96RJ0 339 aa19.39■□□□□ 0.69
CSNK1D-225ENST00000584913 GCOM1H8Y6P7 765 aaPredicted RBP19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 ARVCFO00192 962 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 PIK3CDO00329 1044 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 DYNC1LI2O43237 492 aaPredicted RBP19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 STAM2O75886 525 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 POLR2MP0CAP2 368 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 NID2Q14112 1375 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 LRIT3Q3SXY7 679 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 GPR153Q6NV75 609 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 CCDC62Q6P9F0 684 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 KCNV1Q6PIU1 500 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 TMTC3Q6ZXV5 915 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 RASEFQ8IZ41 740 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 TDHQ8IZJ6 230 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 FANCBQ8NB91 859 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 TBC1D5Q92609 795 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 EMID1Q96A84 441 aaPredicted RBP19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 PDCD2LQ9BRP1 358 aa19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 GPHNQ9NQX3 736 aaPredicted RBP19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 RANBP2P49792 3224 aaKnown RBP19.38■□□□□ 0.69
CSNK1D-225ENST00000584913 A6NJR5 290 aa19.37■□□□□ 0.69
CSNK1D-225ENST00000584913 hCG_1984214I3L0E3 225 aa19.37■□□□□ 0.69
CSNK1D-225ENST00000584913 NR3C2P08235 984 aa19.37■□□□□ 0.69
CSNK1D-225ENST00000584913 ZNF713Q8N859 430 aaPredicted RBP19.37■□□□□ 0.69
CSNK1D-225ENST00000584913 UBE2OQ9C0C9 1292 aaKnown RBP19.37■□□□□ 0.69
CSNK1D-225ENST00000584913 KIAA1217Q5T5P2 1943 aa19.37■□□□□ 0.69
CSNK1D-225ENST00000584913 TLR3O15455 904 aaKnown RBP19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 EIF5BO60841 1220 aaKnown RBP19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 TXNP10599 105 aaKnown RBP19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 TGFB3P10600 412 aa19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 PSMA5P28066 241 aa19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 COL9A3Q14050 684 aaPredicted RBP19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 ADCK5Q3MIX3 580 aa19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 XRRA1Q6P2D8 792 aa19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 SRBD1Q8N5C6 995 aaKnown RBP19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 OR6J1Q8NGC5 347 aa19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 MYL10Q9BUA6 226 aa19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 AGXT2Q9BYV1 514 aa19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 TBX21Q9UL17 535 aa19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 DDX49Q9Y6V7 483 aaKnown RBP19.36■□□□□ 0.69
CSNK1D-225ENST00000584913 ZBTB43O43298 467 aa19.35■□□□□ 0.69
CSNK1D-225ENST00000584913 PLEKHA8P1O95397 391 aa19.35■□□□□ 0.69
CSNK1D-225ENST00000584913 GH1P01241 217 aa19.35■□□□□ 0.69
CSNK1D-225ENST00000584913 BEX3Q00994 111 aa19.35■□□□□ 0.69
CSNK1D-225ENST00000584913 FAAP100Q0VG06 881 aa19.35■□□□□ 0.69
CSNK1D-225ENST00000584913 PGM5Q15124 567 aa19.35■□□□□ 0.69
CSNK1D-225ENST00000584913 VSIG10LQ86VR7 867 aa19.35■□□□□ 0.69
CSNK1D-225ENST00000584913 MICU3Q86XE3 530 aa19.35■□□□□ 0.69
CSNK1D-225ENST00000584913 FAM126BQ8IXS8 530 aa19.35■□□□□ 0.69
CSNK1D-225ENST00000584913 SNX14Q9Y5W7 946 aa19.35■□□□□ 0.69
CSNK1D-225ENST00000584913 TRIM43BA6NCK2 446 aa19.34■□□□□ 0.69
CSNK1D-225ENST00000584913 PQBP1O60828 265 aaKnown RBP19.34■□□□□ 0.69
CSNK1D-225ENST00000584913 CD4P01730 458 aa19.34■□□□□ 0.69
CSNK1D-225ENST00000584913 EIF2AK2P19525 551 aaKnown RBP19.34■□□□□ 0.69
CSNK1D-225ENST00000584913 CCND2P30279 289 aa19.34■□□□□ 0.69
CSNK1D-225ENST00000584913 IRX5P78411 483 aaPredicted RBP19.34■□□□□ 0.69
CSNK1D-225ENST00000584913 PURAQ00577 322 aaKnown RBP19.34■□□□□ 0.69
CSNK1D-225ENST00000584913 PTPN11Q06124 597 aaPredicted RBP19.34■□□□□ 0.69
CSNK1D-225ENST00000584913 PPP1R18Q6NYC8 613 aa19.34■□□□□ 0.69
CSNK1D-225ENST00000584913 CXCL17Q6UXB2 119 aa19.34■□□□□ 0.69
CSNK1D-225ENST00000584913 CUL5Q93034 780 aa19.34■□□□□ 0.69
CSNK1D-225ENST00000584913 TRIM43Q96BQ3 446 aaPredicted RBP19.34■□□□□ 0.69
CSNK1D-225ENST00000584913 PRDM5Q9NQX1 630 aaPredicted RBP19.34■□□□□ 0.69
CSNK1D-225ENST00000584913 CCDC196A0A1B0GTZ2 297 aa19.33■□□□□ 0.68
CSNK1D-225ENST00000584913 ITGA7Q13683 1181 aa19.33■□□□□ 0.68
CSNK1D-225ENST00000584913 BLOC1S2Q6QNY1 142 aa19.33■□□□□ 0.68
CSNK1D-225ENST00000584913 MTG1Q9BT17 334 aaPredicted RBP19.33■□□□□ 0.68
CSNK1D-225ENST00000584913 LRRC2Q9BYS8 371 aa19.33■□□□□ 0.68
CSNK1D-225ENST00000584913 TMEM39AQ9NV64 488 aa19.33■□□□□ 0.68
CSNK1D-225ENST00000584913 CNTNAP5Q8WYK1 1306 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms