RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.76■□□□□ 0.59
ERBB2-222ENST00000584908 GCOM1H8Y6P7 765 aaPredicted RBP18.76■□□□□ 0.59
ERBB2-222ENST00000584908 PIK3CDO00329 1044 aa18.76■□□□□ 0.59
ERBB2-222ENST00000584908 PGK1P00558 417 aa18.76■□□□□ 0.59
ERBB2-222ENST00000584908 POLR2MP0CAP2 368 aa18.76■□□□□ 0.59
ERBB2-222ENST00000584908 ADCYAP1R1P41586 468 aa18.76■□□□□ 0.59
ERBB2-222ENST00000584908 CCDC82Q8N4S0 544 aa18.76■□□□□ 0.59
ERBB2-222ENST00000584908 UPF3BQ9BZI7 483 aaKnown RBP18.76■□□□□ 0.59
ERBB2-222ENST00000584908 PXMP2Q9NR77 195 aa18.76■□□□□ 0.59
ERBB2-222ENST00000584908 PHF24Q9UPV7 400 aa18.76■□□□□ 0.59
ERBB2-222ENST00000584908 FRMPD4Q14CM0 1322 aa18.76■□□□□ 0.59
ERBB2-222ENST00000584908 CTAGE5O15320 804 aa18.75■□□□□ 0.59
ERBB2-222ENST00000584908 SMPD1P17405 629 aa18.75■□□□□ 0.59
ERBB2-222ENST00000584908 PDIA3P30101 505 aaKnown RBP18.75■□□□□ 0.59
ERBB2-222ENST00000584908 HOXA13P31271 388 aaPredicted RBP18.75■□□□□ 0.59
ERBB2-222ENST00000584908 ADD1P35611 737 aaKnown RBP18.75■□□□□ 0.59
ERBB2-222ENST00000584908 DUSP28Q4G0W2 176 aa18.75■□□□□ 0.59
ERBB2-222ENST00000584908 PRPF38BQ5VTL8 546 aaKnown RBP18.75■□□□□ 0.59
ERBB2-222ENST00000584908 EEPD1Q7L9B9 569 aa18.75■□□□□ 0.59
ERBB2-222ENST00000584908 TEX2Q8IWB9 1127 aa18.75■□□□□ 0.59
ERBB2-222ENST00000584908 hCG_1984214I3L0E3 225 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 MEIS2O14770 477 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 NR3C2P08235 984 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 STXBP2Q15833 593 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 NTRK3Q16288 839 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 C1orf53Q5VUE5 145 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 ARHGEF16Q5VV41 709 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 ZNF713Q8N859 430 aaPredicted RBP18.74■□□□□ 0.59
ERBB2-222ENST00000584908 SCFD2Q8WU76 684 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 DPF3Q92784 378 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 ZNF274Q96GC6 653 aaPredicted RBP18.74■□□□□ 0.59
ERBB2-222ENST00000584908 PDCD2LQ9BRP1 358 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 SENP6Q9GZR1 1112 aaPredicted RBP18.74■□□□□ 0.59
ERBB2-222ENST00000584908 SPC25Q9HBM1 224 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 PDRG1Q9NUG6 133 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 hCG_1642624A0A1W2PR95 340 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 MOXD2PA6NHM9 499 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 SNX17Q15036 470 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 LRRC26Q2I0M4 334 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 WDR11Q9BZH6 1224 aa18.74■□□□□ 0.59
ERBB2-222ENST00000584908 NAP1L2Q9ULW6 460 aaPredicted RBP18.74■□□□□ 0.59
ERBB2-222ENST00000584908 V9GY48 417 aaPredicted RBP18.74■□□□□ 0.59
ERBB2-222ENST00000584908 MYADML2A6NDP7 307 aa18.73■□□□□ 0.59
ERBB2-222ENST00000584908 NKRFO15226 690 aaKnown RBP eCLIP18.73■□□□□ 0.592e-6■■■□□ 15.3
ERBB2-222ENST00000584908 EVI5O60447 810 aa18.73■□□□□ 0.59
ERBB2-222ENST00000584908 EIF3JO75822 258 aaKnown RBP18.73■□□□□ 0.59
ERBB2-222ENST00000584908 C6orf222P0C671 652 aaPredicted RBP18.73■□□□□ 0.59
ERBB2-222ENST00000584908 EIF2AK2P19525 551 aaKnown RBP18.73■□□□□ 0.59
ERBB2-222ENST00000584908 PGM5Q15124 567 aa18.73■□□□□ 0.59
ERBB2-222ENST00000584908 TMEM63BQ5T3F8 832 aa18.73■□□□□ 0.59
ERBB2-222ENST00000584908 WWC2Q6AWC2 1192 aa18.73■□□□□ 0.59
ERBB2-222ENST00000584908 PPP1R18Q6NYC8 613 aa18.73■□□□□ 0.59
ERBB2-222ENST00000584908 CCDC62Q6P9F0 684 aa18.73■□□□□ 0.59
ERBB2-222ENST00000584908 TLK2Q86UE8 772 aa18.73■□□□□ 0.59
ERBB2-222ENST00000584908 VSIG10LQ86VR7 867 aa18.73■□□□□ 0.59
ERBB2-222ENST00000584908 PCSK9Q8NBP7 692 aaKnown RBP18.73■□□□□ 0.59
ERBB2-222ENST00000584908 RBM27Q9P2N5 1060 aaKnown RBP18.73■□□□□ 0.59
ERBB2-222ENST00000584908 NR2E3Q9Y5X4 410 aa18.73■□□□□ 0.59
ERBB2-222ENST00000584908 A0A1W2PQ45 241 aaPredicted RBP18.72■□□□□ 0.59
ERBB2-222ENST00000584908 A0A1W2PQY0 241 aa18.72■□□□□ 0.59
ERBB2-222ENST00000584908 IFNAR1P17181 557 aa18.72■□□□□ 0.59
ERBB2-222ENST00000584908 ACLYP53396 1101 aa18.72■□□□□ 0.59
ERBB2-222ENST00000584908 KCNA10Q16322 511 aa18.72■□□□□ 0.59
ERBB2-222ENST00000584908 USP17L6PQ6QN14 398 aa18.72■□□□□ 0.59
ERBB2-222ENST00000584908 SLC39A5Q6ZMH5 540 aa18.72■□□□□ 0.59
ERBB2-222ENST00000584908 HEATR3Q7Z4Q2 680 aa18.72■□□□□ 0.59
ERBB2-222ENST00000584908 CUL5Q93034 780 aa18.72■□□□□ 0.59
ERBB2-222ENST00000584908 PSTPIP2Q9H939 334 aa18.72■□□□□ 0.59
ERBB2-222ENST00000584908 BARHL2Q9NY43 387 aa18.72■□□□□ 0.59
ERBB2-222ENST00000584908 STXBP3O00186 592 aa18.71■□□□□ 0.59
ERBB2-222ENST00000584908 PRPF3O43395 683 aaKnown RBP18.71■□□□□ 0.59
ERBB2-222ENST00000584908 IRX5P78411 483 aaPredicted RBP18.71■□□□□ 0.59
ERBB2-222ENST00000584908 TTLL4Q14679 1199 aa18.71■□□□□ 0.59
ERBB2-222ENST00000584908 PFKFB3Q16875 520 aaPredicted RBP18.71■□□□□ 0.59
ERBB2-222ENST00000584908 GNASQ5JWF2 1037 aa18.71■□□□□ 0.59
ERBB2-222ENST00000584908 TYW1BQ6NUM6 668 aa18.71■□□□□ 0.59
ERBB2-222ENST00000584908 NOL8Q76FK4 1167 aaKnown RBP18.71■□□□□ 0.59
ERBB2-222ENST00000584908 FCHSD1Q86WN1 690 aa18.71■□□□□ 0.59
ERBB2-222ENST00000584908 IL31RAQ8NI17 732 aa18.71■□□□□ 0.59
ERBB2-222ENST00000584908 GPKOWQ92917 476 aaPredicted RBP eCLIP18.71■□□□□ 0.59
ERBB2-222ENST00000584908 RNF26Q9BY78 433 aaPredicted RBP18.71■□□□□ 0.59
ERBB2-222ENST00000584908 AP5M1Q9H0R1 490 aa18.71■□□□□ 0.59
ERBB2-222ENST00000584908 DYNC1LI2O43237 492 aaPredicted RBP18.7■□□□□ 0.58
ERBB2-222ENST00000584908 RGS20O76081 388 aa18.7■□□□□ 0.58
ERBB2-222ENST00000584908 ARIH2O95376 493 aa18.7■□□□□ 0.58
ERBB2-222ENST00000584908 MYCNP04198 464 aaPredicted RBP18.7■□□□□ 0.58
ERBB2-222ENST00000584908 ASGR1P07306 291 aa18.7■□□□□ 0.58
ERBB2-222ENST00000584908 PKN1Q16512 942 aa18.7■□□□□ 0.58
ERBB2-222ENST00000584908 FSCN1Q16658 493 aaKnown RBP18.7■□□□□ 0.58
ERBB2-222ENST00000584908 SMARCC2Q8TAQ2 1214 aa18.7■□□□□ 0.58
ERBB2-222ENST00000584908 ELP1O95163 1332 aa18.7■□□□□ 0.58
ERBB2-222ENST00000584908 MYH7BA7E2Y1 1941 aa18.69■□□□□ 0.58
ERBB2-222ENST00000584908 H0YGN5 161 aa18.69■□□□□ 0.58
ERBB2-222ENST00000584908 STAM2O75886 525 aa18.69■□□□□ 0.58
ERBB2-222ENST00000584908 TXNP10599 105 aaKnown RBP18.69■□□□□ 0.58
ERBB2-222ENST00000584908 SCG2P13521 617 aa18.69■□□□□ 0.58
ERBB2-222ENST00000584908 PTGS1P23219 599 aa18.69■□□□□ 0.58
ERBB2-222ENST00000584908 CCND2P30279 289 aa18.69■□□□□ 0.58
ERBB2-222ENST00000584908 NAPAP54920 295 aa18.69■□□□□ 0.58
ERBB2-222ENST00000584908 ANKRD1Q15327 319 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms