RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 SOCS4Q8WXH5 440 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 PGBD1Q96JS3 809 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 TAAR1Q96RJ0 339 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 MAF1Q9H063 256 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 COL20A1Q9P218 1284 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 GJD2Q9UKL4 321 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 GABRQQ9UN88 632 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 DNAJC25-GNG10A0A024R161 153 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 BTBD18B2RXH4 712 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 FLT3LGP49771 235 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 GHRHRQ02643 423 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 PRKCZQ05513 592 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 ARHGEF16Q5VV41 709 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 FAM133AQ8N9E0 248 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 DAGLBQ8NCG7 672 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 RMDN3Q96TC7 470 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 GDPD2Q9HCC8 539 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 ADD3Q9UEY8 706 aaKnown RBP12.52□□□□□ -0.41
TOP3A-216ENST00000583804 SRRDQ9UH36 339 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 PCDHA6Q9UN73 950 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 TRIM17Q9Y577 477 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 PCDHA8Q9Y5H6 950 aa12.52□□□□□ -0.41
TOP3A-216ENST00000583804 CCDC194A0A1B0GVG4 234 aa12.51□□□□□ -0.41
TOP3A-216ENST00000583804 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
TOP3A-216ENST00000583804 FAM205CA6NFA0 338 aa12.51□□□□□ -0.41
TOP3A-216ENST00000583804 FOSP01100 380 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-216ENST00000583804 GNRH1P01148 92 aa12.51□□□□□ -0.41
TOP3A-216ENST00000583804 EIF2AK2P19525 551 aaKnown RBP12.51□□□□□ -0.41
TOP3A-216ENST00000583804 CLK2P49760 499 aaKnown RBP12.51□□□□□ -0.41
TOP3A-216ENST00000583804 UBXN2AP68543 259 aa12.51□□□□□ -0.41
TOP3A-216ENST00000583804 CEBPZQ03701 1054 aaKnown RBP12.51□□□□□ -0.41
TOP3A-216ENST00000583804 NR5A1Q13285 461 aa12.51□□□□□ -0.41
TOP3A-216ENST00000583804 NPY5RQ15761 445 aa12.51□□□□□ -0.41
TOP3A-216ENST00000583804 ZNF792Q3KQV3 632 aa12.51□□□□□ -0.41
TOP3A-216ENST00000583804 MCTP2Q6DN12 878 aa12.51□□□□□ -0.41
TOP3A-216ENST00000583804 TEX2Q8IWB9 1127 aa12.51□□□□□ -0.41
TOP3A-216ENST00000583804 NPLOC4Q8TAT6 608 aa12.51□□□□□ -0.41
TOP3A-216ENST00000583804 NSUN6Q8TEA1 469 aaKnown RBP12.51□□□□□ -0.41
TOP3A-216ENST00000583804 FTOQ9C0B1 505 aaKnown RBP eCLIP12.51□□□□□ -0.41
TOP3A-216ENST00000583804 ATP2B1P20020 1258 aa12.5□□□□□ -0.41
TOP3A-216ENST00000583804 DNM1Q05193 864 aaKnown RBP12.5□□□□□ -0.41
TOP3A-216ENST00000583804 AP3B2Q13367 1082 aa12.5□□□□□ -0.41
TOP3A-216ENST00000583804 COL13A1Q5TAT6 717 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-216ENST00000583804 PIK3AP1Q6ZUJ8 805 aa12.5□□□□□ -0.41
TOP3A-216ENST00000583804 OTOP1Q7RTM1 612 aa12.5□□□□□ -0.41
TOP3A-216ENST00000583804 KRT25Q7Z3Z0 450 aa12.5□□□□□ -0.41
TOP3A-216ENST00000583804 RAET1EQ8TD07 263 aa12.5□□□□□ -0.41
TOP3A-216ENST00000583804 USP6NLQ92738 828 aa12.5□□□□□ -0.41
TOP3A-216ENST00000583804 ANO3Q9BYT9 981 aa12.5□□□□□ -0.41
TOP3A-216ENST00000583804 EHMT1Q9H9B1 1298 aa12.5□□□□□ -0.41
TOP3A-216ENST00000583804 CNPY2Q9Y2B0 182 aa12.5□□□□□ -0.41
TOP3A-216ENST00000583804 ZSWIM8A7E2V4 1837 aa12.49□□□□□ -0.41
TOP3A-216ENST00000583804 PLXNB2O15031 1838 aa12.49□□□□□ -0.41
TOP3A-216ENST00000583804 B4DLN1 442 aa12.49□□□□□ -0.41
TOP3A-216ENST00000583804 M0R2N6 131 aa12.49□□□□□ -0.41
TOP3A-216ENST00000583804 FIBPO43427 364 aa12.49□□□□□ -0.41
TOP3A-216ENST00000583804 HOXC6P09630 235 aa12.49□□□□□ -0.41
TOP3A-216ENST00000583804 MYCLP12524 364 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-216ENST00000583804 ALDH5A1P51649 535 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-216ENST00000583804 DNERQ8NFT8 737 aa12.49□□□□□ -0.41
TOP3A-216ENST00000583804 MAML3Q96JK9 1138 aa12.49□□□□□ -0.41
TOP3A-216ENST00000583804 FGD4Q96M96 766 aa12.49□□□□□ -0.41
TOP3A-216ENST00000583804 MPHOSPH6Q99547 160 aaKnown RBP12.49□□□□□ -0.41
TOP3A-216ENST00000583804 APBA2Q99767 749 aa12.49□□□□□ -0.41
TOP3A-216ENST00000583804 FOXP1Q9H334 677 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-216ENST00000583804 PXMP2Q9NR77 195 aa12.49□□□□□ -0.41
TOP3A-216ENST00000583804 TFIP11Q9UBB9 837 aaKnown RBP12.49□□□□□ -0.41
TOP3A-216ENST00000583804 DIS3Q9Y2L1 958 aaKnown RBP12.49□□□□□ -0.41
TOP3A-216ENST00000583804 DDX49Q9Y6V7 483 aaKnown RBP12.49□□□□□ -0.41
TOP3A-216ENST00000583804 MGAMO43451 1857 aa12.48□□□□□ -0.41
TOP3A-216ENST00000583804 BAG4O95429 457 aaKnown RBP12.48□□□□□ -0.41
TOP3A-216ENST00000583804 XRCC5P13010 732 aaKnown RBP12.48□□□□□ -0.41
TOP3A-216ENST00000583804 PDIA4P13667 645 aaKnown RBP12.48□□□□□ -0.41
TOP3A-216ENST00000583804 PRMT2P55345 433 aa12.48□□□□□ -0.41
TOP3A-216ENST00000583804 PDE4DQ08499 809 aa12.48□□□□□ -0.41
TOP3A-216ENST00000583804 NONOQ15233 471 aaKnown RBP eCLIP12.48□□□□□ -0.41
TOP3A-216ENST00000583804 CCL14Q16627 93 aa12.48□□□□□ -0.41
TOP3A-216ENST00000583804 EARS2Q5JPH6 523 aaKnown RBP12.48□□□□□ -0.41
TOP3A-216ENST00000583804 TBCKQ8TEA7 893 aa12.48□□□□□ -0.41
TOP3A-216ENST00000583804 ZFP91Q96JP5 570 aaPredicted RBP12.48□□□□□ -0.41
TOP3A-216ENST00000583804 PDCD2LQ9BRP1 358 aa12.48□□□□□ -0.41
TOP3A-216ENST00000583804 ASTN1O14525 1302 aa12.48□□□□□ -0.41
TOP3A-216ENST00000583804 ASB14A6NK59 587 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 ADCY3O60266 1144 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 NR3C2P08235 984 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 U2AF2P26368 475 aaKnown RBP eCLIP12.47□□□□□ -0.413e-6■■□□□ 13
TOP3A-216ENST00000583804 ZNF76P36508 570 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 SREBF1P36956 1147 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 ARHGAP4P98171 946 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 IRF5Q13568 498 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 PGM5Q15124 567 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 STXBP2Q15833 593 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 INF2Q27J81 1249 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-216ENST00000583804 NOSTRINQ8IVI9 506 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 IL31RAQ8NI17 732 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 TNFRSF25Q93038 417 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 IWS1Q96ST2 819 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 TINF2Q9BSI4 451 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 FLRT1Q9NZU1 646 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms