RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 A1CFQ9NQ94 594 aaKnown RBP18.68■□□□□ 0.58
CDK5RAP3-228ENST00000583363 PTCH2Q9Y6C5 1203 aa18.68■□□□□ 0.58
CDK5RAP3-228ENST00000583363 TOB1P50616 345 aaPredicted RBP18.67■□□□□ 0.58
CDK5RAP3-228ENST00000583363 NONOQ15233 471 aaKnown RBP eCLIP18.67■□□□□ 0.58
CDK5RAP3-228ENST00000583363 FCHSD1Q86WN1 690 aa18.67■□□□□ 0.58
CDK5RAP3-228ENST00000583363 CYP39A1Q9NYL5 469 aa18.67■□□□□ 0.58
CDK5RAP3-228ENST00000583363 SPDYE3A6NKU9 549 aa18.66■□□□□ 0.58
CDK5RAP3-228ENST00000583363 FOXD4L6Q3SYB3 417 aaPredicted RBP18.66■□□□□ 0.58
CDK5RAP3-228ENST00000583363 FOXD4L3Q6VB84 417 aaPredicted RBP18.66■□□□□ 0.58
CDK5RAP3-228ENST00000583363 ANKRD35Q8N283 1001 aa18.66■□□□□ 0.58
CDK5RAP3-228ENST00000583363 PGBD1Q96JS3 809 aa18.66■□□□□ 0.58
CDK5RAP3-228ENST00000583363 TAAR1Q96RJ0 339 aa18.66■□□□□ 0.58
CDK5RAP3-228ENST00000583363 ANO3Q9BYT9 981 aa18.66■□□□□ 0.58
CDK5RAP3-228ENST00000583363 COL20A1Q9P218 1284 aa18.66■□□□□ 0.58
CDK5RAP3-228ENST00000583363 EDIL3O43854 480 aa18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 TRAPPC10P48553 1259 aa18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 DNM1Q05193 864 aaKnown RBP18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 INF2Q27J81 1249 aa18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 SLC9C1Q4G0N8 1177 aa18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 RILPL1Q5EBL4 403 aa18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 ATL3Q6DD88 541 aa18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 SLC30A10Q6XR72 485 aa18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 CLEC17AQ6ZS10 378 aa18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 TBCKQ8TEA7 893 aa18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 CHAMP1Q96JM3 812 aa18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 ZNF396Q96N95 335 aaPredicted RBP18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 MMP19Q99542 508 aa18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 TMEM106CQ9BVX2 250 aa18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 NOL7Q9UMY1 257 aaKnown RBP18.65■□□□□ 0.58
CDK5RAP3-228ENST00000583363 STRNO43815 780 aa18.64■□□□□ 0.57
CDK5RAP3-228ENST00000583363 FCER1AP12319 257 aa18.64■□□□□ 0.57
CDK5RAP3-228ENST00000583363 MAPK4P31152 587 aa18.64■□□□□ 0.57
CDK5RAP3-228ENST00000583363 CCAR1Q8IX12 1150 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP3-228ENST00000583363 CRYGNQ8WXF5 182 aa18.64■□□□□ 0.57
CDK5RAP3-228ENST00000583363 ARHGAP39Q9C0H5 1083 aa18.64■□□□□ 0.57
CDK5RAP3-228ENST00000583363 TFIP11Q9UBB9 837 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP3-228ENST00000583363 PFASO15067 1338 aa18.64■□□□□ 0.57
CDK5RAP3-228ENST00000583363 BAG4O95429 457 aaKnown RBP18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 ATP2B1P20020 1258 aa18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 SREBF1P36956 1147 aa18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 USP11P51784 963 aa18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 KCTD2Q14681 263 aa18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 ARHGEF6Q15052 776 aa18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 WDR78Q5VTH9 848 aa18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 GPR142Q7Z601 462 aa18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 PLEKHH3Q7Z736 793 aa18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 NEK8Q86SG6 692 aa18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 ABRAQ8N0Z2 381 aa18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 PURBQ96QR8 312 aaKnown RBP18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 USP28Q96RU2 1077 aa18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 EHMT1Q9H9B1 1298 aa18.63■□□□□ 0.57
CDK5RAP3-228ENST00000583363 DNAJC25-GNG10A0A024R161 153 aa18.62■□□□□ 0.57
CDK5RAP3-228ENST00000583363 CYP3A4P08684 503 aa18.62■□□□□ 0.57
CDK5RAP3-228ENST00000583363 PTPREP23469 700 aa18.62■□□□□ 0.57
CDK5RAP3-228ENST00000583363 ARHGAP4P98171 946 aa18.62■□□□□ 0.57
CDK5RAP3-228ENST00000583363 FAM133AQ8N9E0 248 aa18.62■□□□□ 0.57
CDK5RAP3-228ENST00000583363 RMDN3Q96TC7 470 aa18.62■□□□□ 0.57
CDK5RAP3-228ENST00000583363 RTEL1Q9NZ71 1219 aa18.62■□□□□ 0.57
CDK5RAP3-228ENST00000583363 CFAP45Q9UL16 551 aa18.62■□□□□ 0.57
CDK5RAP3-228ENST00000583363 PCDHB6Q9Y5E3 794 aa18.62■□□□□ 0.57
CDK5RAP3-228ENST00000583363 CLIC4Q9Y696 253 aa18.62■□□□□ 0.57
CDK5RAP3-228ENST00000583363 RPTORQ8N122 1335 aa18.62■□□□□ 0.57
CDK5RAP3-228ENST00000583363 FRMPD4Q14CM0 1322 aa18.61■□□□□ 0.57
CDK5RAP3-228ENST00000583363 POTEB2H3BUK9 544 aa18.61■□□□□ 0.57
CDK5RAP3-228ENST00000583363 WNT7AO00755 349 aa18.61■□□□□ 0.57
CDK5RAP3-228ENST00000583363 MYCP01106 439 aaPredicted RBP18.61■□□□□ 0.57
CDK5RAP3-228ENST00000583363 KRT85P78386 507 aa18.61■□□□□ 0.57
CDK5RAP3-228ENST00000583363 CNTN2Q02246 1040 aa18.61■□□□□ 0.57
CDK5RAP3-228ENST00000583363 ZNF174Q15697 407 aa18.61■□□□□ 0.57
CDK5RAP3-228ENST00000583363 TTC38Q5R3I4 469 aa18.61■□□□□ 0.57
CDK5RAP3-228ENST00000583363 ANO1Q5XXA6 986 aa18.61■□□□□ 0.57
CDK5RAP3-228ENST00000583363 DNERQ8NFT8 737 aa18.61■□□□□ 0.57
CDK5RAP3-228ENST00000583363 PXMP2Q9NR77 195 aa18.61■□□□□ 0.57
CDK5RAP3-228ENST00000583363 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.61■□□□□ 0.57
CDK5RAP3-228ENST00000583363 CYP3A7-CYP3A51PA0A087WV96 503 aa18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 SOWAHBA6NEL2 793 aa18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 CYP3A7P24462 503 aa18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 CIITAP33076 1130 aa18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 LACTBP83111 547 aaPredicted RBP18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 NBR1Q14596 966 aa18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 SF3A1Q15459 793 aaKnown RBP18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 LETM2Q2VYF4 491 aa18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 ARHGEF16Q5VV41 709 aa18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 NSUN6Q8TEA1 469 aaKnown RBP18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 SH3TC2Q8TF17 1288 aa18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 FTOQ9C0B1 505 aaKnown RBP eCLIP18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 POLR3EQ9NVU0 708 aa18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 RCOR1Q9UKL0 485 aa18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 CNPY2Q9Y2B0 182 aa18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 IVNS1ABPQ9Y6Y0 642 aa18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 ZNFX1Q9P2E3 1918 aaKnown RBP18.6■□□□□ 0.57
CDK5RAP3-228ENST00000583363 SLC15A5A6NIM6 579 aa18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 CCNT1O60563 726 aaKnown RBP18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 COBLO75128 1261 aa18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 PGK2P07205 417 aa18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 ADORA2AP29274 412 aa18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 NASPP49321 788 aaPredicted RBP18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 FXR1P51114 621 aaKnown RBP eCLIP18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 CEBPZQ03701 1054 aaKnown RBP18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 GRB14Q14449 540 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms