RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 COL11A2P13942 1736 aaPredicted RBP15.28■□□□□ 0.04
SRSF1-205ENST00000582730 FOCADQ5VW36 1801 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 MYO3BQ8WXR4 1341 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 B4DLN1 442 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 RNF225M0QZC1 329 aaPredicted RBP15.28■□□□□ 0.04
SRSF1-205ENST00000582730 ICA1Q05084 483 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 GRB10Q13322 594 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
SRSF1-205ENST00000582730 ACRBPQ8NEB7 543 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 P2RX5Q93086 422 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 MTMR9Q96QG7 549 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 NUDT12Q9BQG2 462 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 DHX36Q9H2U1 1008 aaKnown RBP15.28■□□□□ 0.04
SRSF1-205ENST00000582730 ABHD10Q9NUJ1 306 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 PCDHA1Q9Y5I3 950 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 ADGRG1Q9Y653 693 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 ITIH6Q6UXX5 1313 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 LRRC10BA6NIK2 292 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 ZRANB2O95218 330 aaKnown RBP eCLIP15.28■□□□□ 0.046e-7■■□□□ 12.2
SRSF1-205ENST00000582730 MTIF2P46199 727 aaKnown RBP15.28■□□□□ 0.04
SRSF1-205ENST00000582730 QRICH1Q2TAL8 776 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 LARP4BQ92615 738 aaKnown RBP15.28■□□□□ 0.04
SRSF1-205ENST00000582730 POLR3GO15318 223 aaPredicted RBP15.27■□□□□ 0.04
SRSF1-205ENST00000582730 TTI2Q6NXR4 508 aa15.27■□□□□ 0.04
SRSF1-205ENST00000582730 TMCO3Q6UWJ1 677 aa15.27■□□□□ 0.04
SRSF1-205ENST00000582730 UBXN4Q92575 508 aa15.27■□□□□ 0.04
SRSF1-205ENST00000582730 DHTKD1Q96HY7 919 aaPredicted RBP15.27■□□□□ 0.04
SRSF1-205ENST00000582730 C7orf25Q9BPX7 421 aa15.27■□□□□ 0.04
SRSF1-205ENST00000582730 EHD4Q9H223 541 aa15.27■□□□□ 0.04
SRSF1-205ENST00000582730 CDC37Q16543 378 aaPredicted RBP15.27■□□□□ 0.03
SRSF1-205ENST00000582730 USH1GQ495M9 461 aa15.27■□□□□ 0.03
SRSF1-205ENST00000582730 ANKRD40Q6AI12 368 aa15.27■□□□□ 0.03
SRSF1-205ENST00000582730 CNNM4Q6P4Q7 775 aa15.27■□□□□ 0.03
SRSF1-205ENST00000582730 SH3BP5LQ7L8J4 393 aa15.27■□□□□ 0.03
SRSF1-205ENST00000582730 PNMA5Q96PV4 448 aa15.27■□□□□ 0.03
SRSF1-205ENST00000582730 THAP9Q9H5L6 903 aa15.27■□□□□ 0.03
SRSF1-205ENST00000582730 KANSL2Q9H9L4 492 aa15.27■□□□□ 0.03
SRSF1-205ENST00000582730 BICDL2A1A5D9 508 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 MYMKA6NI61 221 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 LGALS16A8MUM7 142 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 CCNE1P24864 410 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 EEF1GP26641 437 aaKnown RBP15.26■□□□□ 0.03
SRSF1-205ENST00000582730 SLC20A2Q08357 652 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 ORC2Q13416 577 aaPredicted RBP15.26■□□□□ 0.03
SRSF1-205ENST00000582730 PPP1R18Q6NYC8 613 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 MB21D1Q8N884 522 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 CCDC51Q96ER9 411 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 TUBGCP2Q9BSJ2 902 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 PPIP5K2O43314 1243 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 EDIL3O43854 480 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 ERCC3P19447 782 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 FXR2P51116 673 aaKnown RBP eCLIP15.26■□□□□ 0.03
SRSF1-205ENST00000582730 ZNF772Q68DY9 489 aaPredicted RBP15.26■□□□□ 0.03
SRSF1-205ENST00000582730 CNOT6LQ96LI5 555 aaKnown RBP15.26■□□□□ 0.03
SRSF1-205ENST00000582730 BLOC1S4Q9NUP1 217 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 KIF5CO60282 957 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 ERVK-24P63145 666 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 PDE4CQ08493 712 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 TRIM14Q14142 442 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 ABCB5Q2M3G0 1257 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 TSR1Q2NL82 804 aaKnown RBP15.26■□□□□ 0.03
SRSF1-205ENST00000582730 DUSP9Q99956 384 aaKnown RBP15.26■□□□□ 0.03
SRSF1-205ENST00000582730 SLF1Q9BQI6 1058 aa15.26■□□□□ 0.03
SRSF1-205ENST00000582730 ARGLU1Q9NWB6 273 aaPredicted RBP15.26■□□□□ 0.03
SRSF1-205ENST00000582730 TAL1P17542 331 aaPredicted RBP15.25■□□□□ 0.03
SRSF1-205ENST00000582730 SAMD1Q6SPF0 538 aaPredicted RBP15.25■□□□□ 0.03
SRSF1-205ENST00000582730 KCNK18Q7Z418 384 aa15.25■□□□□ 0.03
SRSF1-205ENST00000582730 TMTC1Q8IUR5 882 aa15.25■□□□□ 0.03
SRSF1-205ENST00000582730 KIAA0895Q8NCT3 520 aa15.25■□□□□ 0.03
SRSF1-205ENST00000582730 NEK11Q8NG66 645 aa15.25■□□□□ 0.03
SRSF1-205ENST00000582730 STK17AQ9UEE5 414 aa15.25■□□□□ 0.03
SRSF1-205ENST00000582730 PCDHA12Q9UN75 941 aa15.25■□□□□ 0.03
SRSF1-205ENST00000582730 TTC26A0AVF1 554 aa15.25■□□□□ 0.03
SRSF1-205ENST00000582730 C21orf2O43822 256 aa15.25■□□□□ 0.03
SRSF1-205ENST00000582730 SEC31AO94979 1220 aaKnown RBP15.25■□□□□ 0.03
SRSF1-205ENST00000582730 TRIM21P19474 475 aaKnown RBP15.25■□□□□ 0.03
SRSF1-205ENST00000582730 ZNF569Q5MCW4 686 aa15.25■□□□□ 0.03
SRSF1-205ENST00000582730 STYK1Q6J9G0 422 aa15.25■□□□□ 0.03
SRSF1-205ENST00000582730 CYP26C1Q6V0L0 522 aa15.25■□□□□ 0.03
SRSF1-205ENST00000582730 SPICE1Q8N0Z3 855 aa15.25■□□□□ 0.03
SRSF1-205ENST00000582730 CNKSR1Q969H4 720 aa15.25■□□□□ 0.03
SRSF1-205ENST00000582730 LUC7L2Q9Y383 392 aaKnown RBP15.25■□□□□ 0.03
SRSF1-205ENST00000582730 MYH4Q9Y623 1939 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 F5H6K3 240 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 GH2P01242 217 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 KLRC3Q07444 240 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 TBC1D8BQ0IIM8 1120 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 CHP1Q99653 195 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 NOC4LQ9BVI4 516 aaKnown RBP15.24■□□□□ 0.03
SRSF1-205ENST00000582730 ZSWIM4Q9H7M6 989 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 LRRC41Q15345 812 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 TEX35Q5T0J7 233 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 NOC3LQ8WTT2 800 aaKnown RBP15.24■□□□□ 0.03
SRSF1-205ENST00000582730 RAD54LQ92698 747 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 CSRNP1Q96S65 589 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 IDI2Q9BXS1 227 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 QSER1Q2KHR3 1735 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 NRXN2Q9P2S2 1712 aa15.24■□□□□ 0.03
SRSF1-205ENST00000582730 CLRN2A0PK11 232 aa15.23■□□□□ 0.03
SRSF1-205ENST00000582730 TCP10L2B9ZVM9 353 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms